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NYD-SP16, a Novel Gene Associated with Spermatogenesis of Human Testis
By hybridizing human adult testis cDNA microarrays with human adult and embryo testis cDNA probes, a novel human testis gene NYD-SP16 was identified. NYD-SP16 expression was 6.44-fold higher in adult testis than in fetal testis. NYD-SP16 contains 1595 base pairs (bp) and a 762-bp open reading frame...
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Published in: | Biology of reproduction 2003-01, Vol.68 (1), p.190-198 |
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creator | Cheng, Li Jun Li, Jian Min Chen, Jing Ge, Ye Hua Yu, Zuo Ren Han, Dai Shu Zhou, Zuo Min Sha, Jia Hao |
description | By hybridizing human adult testis cDNA microarrays with human adult and embryo testis cDNA probes, a novel human testis gene
NYD-SP16 was identified. NYD-SP16 expression was 6.44-fold higher in adult testis than in fetal testis. NYD-SP16 contains 1595 base pairs (bp) and a 762-bp open reading frame encoding a 254-amino acid protein with 73% amino acid sequence
identity with the mouse testis homologous protein. The NYD-SP16 gene was localized to human chromosome 5q14. The deduced structure of the NYD-SP16 protein contains one transmembrane domain,
which was confirmed by GFP/NYD-SP16 fusion protein expression in the cytomembrane of the transfected human choriocarcinoma
JAR cells, suggesting that it is a transmembrane protein. Multiple tissue distribution indicated that NYD-SP16 mRNA is highly expressed in the testes and pancreas, with little or no expression elsewhere. Further analysis of abnormal
expression in infertile male patients revealed complete absence of NYD-SP16 in the testes of patients with Sertoli-cell-only syndrome and variable expression in patients with spermatogenic arrest.
Homologous gene expression in mouse testis was confirmed in spermatogenic cells by in situ hybridization. The results of cDNA
microarray, in situ hybridization, and semiquantitative polymerase chain reaction in mouse testis of different stages indicated
that NYD-SP16 expression is developmentally regulated. These results suggest that the putative NYD-SP16 protein may play an important role
in testicular development/spermatogenesis and may be an important factor in male infertility. |
doi_str_mv | 10.1095/biolreprod.102.004242 |
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NYD-SP16 was identified. NYD-SP16 expression was 6.44-fold higher in adult testis than in fetal testis. NYD-SP16 contains 1595 base pairs (bp) and a 762-bp open reading frame encoding a 254-amino acid protein with 73% amino acid sequence
identity with the mouse testis homologous protein. The NYD-SP16 gene was localized to human chromosome 5q14. The deduced structure of the NYD-SP16 protein contains one transmembrane domain,
which was confirmed by GFP/NYD-SP16 fusion protein expression in the cytomembrane of the transfected human choriocarcinoma
JAR cells, suggesting that it is a transmembrane protein. Multiple tissue distribution indicated that NYD-SP16 mRNA is highly expressed in the testes and pancreas, with little or no expression elsewhere. Further analysis of abnormal
expression in infertile male patients revealed complete absence of NYD-SP16 in the testes of patients with Sertoli-cell-only syndrome and variable expression in patients with spermatogenic arrest.
Homologous gene expression in mouse testis was confirmed in spermatogenic cells by in situ hybridization. The results of cDNA
microarray, in situ hybridization, and semiquantitative polymerase chain reaction in mouse testis of different stages indicated
that NYD-SP16 expression is developmentally regulated. These results suggest that the putative NYD-SP16 protein may play an important role
in testicular development/spermatogenesis and may be an important factor in male infertility.</description><identifier>ISSN: 0006-3363</identifier><identifier>EISSN: 1529-7268</identifier><identifier>DOI: 10.1095/biolreprod.102.004242</identifier><identifier>PMID: 12493713</identifier><identifier>CODEN: BIREBV</identifier><language>eng</language><publisher>Madison, WI: Society for the Study of Reproduction</publisher><subject>Adult ; Amino Acid Sequence ; Animals ; Base Sequence ; Biological and medical sciences ; Chromosomes, Human, Pair 5 - genetics ; DNA, Complementary - genetics ; Fetus - metabolism ; Fundamental and applied biological sciences. Psychology ; Gene Expression Regulation, Developmental ; Humans ; In Situ Hybridization ; Infertility, Male - genetics ; Infertility, Male - metabolism ; Male ; Mammalian male genital system ; Membrane Proteins - chemistry ; Membrane Proteins - genetics ; Mice ; Molecular Sequence Data ; Morphology. Physiology ; Oligonucleotide Array Sequence Analysis ; RNA, Messenger - genetics ; RNA, Messenger - metabolism ; Sequence Homology, Amino Acid ; Spermatogenesis - genetics ; Testis - growth & development ; Testis - metabolism ; Tissue Distribution ; Transcription Factors ; Vertebrates: reproduction</subject><ispartof>Biology of reproduction, 2003-01, Vol.68 (1), p.190-198</ispartof><rights>2003 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,778,782,4012,27910,27911,27912</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=14448089$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12493713$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Cheng, Li Jun</creatorcontrib><creatorcontrib>Li, Jian Min</creatorcontrib><creatorcontrib>Chen, Jing</creatorcontrib><creatorcontrib>Ge, Ye Hua</creatorcontrib><creatorcontrib>Yu, Zuo Ren</creatorcontrib><creatorcontrib>Han, Dai Shu</creatorcontrib><creatorcontrib>Zhou, Zuo Min</creatorcontrib><creatorcontrib>Sha, Jia Hao</creatorcontrib><title>NYD-SP16, a Novel Gene Associated with Spermatogenesis of Human Testis</title><title>Biology of reproduction</title><addtitle>Biol Reprod</addtitle><description>By hybridizing human adult testis cDNA microarrays with human adult and embryo testis cDNA probes, a novel human testis gene
NYD-SP16 was identified. NYD-SP16 expression was 6.44-fold higher in adult testis than in fetal testis. NYD-SP16 contains 1595 base pairs (bp) and a 762-bp open reading frame encoding a 254-amino acid protein with 73% amino acid sequence
identity with the mouse testis homologous protein. The NYD-SP16 gene was localized to human chromosome 5q14. The deduced structure of the NYD-SP16 protein contains one transmembrane domain,
which was confirmed by GFP/NYD-SP16 fusion protein expression in the cytomembrane of the transfected human choriocarcinoma
JAR cells, suggesting that it is a transmembrane protein. Multiple tissue distribution indicated that NYD-SP16 mRNA is highly expressed in the testes and pancreas, with little or no expression elsewhere. Further analysis of abnormal
expression in infertile male patients revealed complete absence of NYD-SP16 in the testes of patients with Sertoli-cell-only syndrome and variable expression in patients with spermatogenic arrest.
Homologous gene expression in mouse testis was confirmed in spermatogenic cells by in situ hybridization. The results of cDNA
microarray, in situ hybridization, and semiquantitative polymerase chain reaction in mouse testis of different stages indicated
that NYD-SP16 expression is developmentally regulated. These results suggest that the putative NYD-SP16 protein may play an important role
in testicular development/spermatogenesis and may be an important factor in male infertility.</description><subject>Adult</subject><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Chromosomes, Human, Pair 5 - genetics</subject><subject>DNA, Complementary - genetics</subject><subject>Fetus - metabolism</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene Expression Regulation, Developmental</subject><subject>Humans</subject><subject>In Situ Hybridization</subject><subject>Infertility, Male - genetics</subject><subject>Infertility, Male - metabolism</subject><subject>Male</subject><subject>Mammalian male genital system</subject><subject>Membrane Proteins - chemistry</subject><subject>Membrane Proteins - genetics</subject><subject>Mice</subject><subject>Molecular Sequence Data</subject><subject>Morphology. Physiology</subject><subject>Oligonucleotide Array Sequence Analysis</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Messenger - metabolism</subject><subject>Sequence Homology, Amino Acid</subject><subject>Spermatogenesis - genetics</subject><subject>Testis - growth & development</subject><subject>Testis - metabolism</subject><subject>Tissue Distribution</subject><subject>Transcription Factors</subject><subject>Vertebrates: reproduction</subject><issn>0006-3363</issn><issn>1529-7268</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><recordid>eNpF0E1Lw0AQBuBFFFurP0HZi55M3a8ku8dSbSuUKrQePIXtZtKsbJKaTQz-eyNWehqGeXiHGYSuKRlTosKHra1cDfu6SvuejQkRTLATNKQhU0HMInmKhoSQKOA84gN04f0HIVRwxs_RgDKheEz5EM1W74_B-pVG91jjVfUFDs-hBDzxvjJWN5DizjY5Xu-hLnRT7fqhtx5XGV60hS7xBnxj_SU6y7TzcHWoI_Q2e9pMF8HyZf48nSyDnEVxE6hMaGXAhJpkYSgJFxmHlAgwWRgrQ-hWpKlWioVghGSSK_ZLQkUUMFDAR-juL7c__LPtVyeF9Qac0yVUrU9iJmX_h7iHNwfYbgtIk31tC11_J_-X9-D2ALQ32mW1Lo31RyeEkESqo8vtLu9sDYkvtHN9LE-6rotkQhOqCP8B92Z1pw</recordid><startdate>20030101</startdate><enddate>20030101</enddate><creator>Cheng, Li Jun</creator><creator>Li, Jian Min</creator><creator>Chen, Jing</creator><creator>Ge, Ye Hua</creator><creator>Yu, Zuo Ren</creator><creator>Han, Dai Shu</creator><creator>Zhou, Zuo Min</creator><creator>Sha, Jia Hao</creator><general>Society for the Study of Reproduction</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope></search><sort><creationdate>20030101</creationdate><title>NYD-SP16, a Novel Gene Associated with Spermatogenesis of Human Testis</title><author>Cheng, Li Jun ; Li, Jian Min ; Chen, Jing ; Ge, Ye Hua ; Yu, Zuo Ren ; Han, Dai Shu ; Zhou, Zuo Min ; Sha, Jia Hao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-h267t-9f4a9cec5a0f558034f3ed04ecf579c01b4dda9925ec482839234f35909e2e9e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Adult</topic><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Chromosomes, Human, Pair 5 - genetics</topic><topic>DNA, Complementary - genetics</topic><topic>Fetus - metabolism</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene Expression Regulation, Developmental</topic><topic>Humans</topic><topic>In Situ Hybridization</topic><topic>Infertility, Male - genetics</topic><topic>Infertility, Male - metabolism</topic><topic>Male</topic><topic>Mammalian male genital system</topic><topic>Membrane Proteins - chemistry</topic><topic>Membrane Proteins - genetics</topic><topic>Mice</topic><topic>Molecular Sequence Data</topic><topic>Morphology. Physiology</topic><topic>Oligonucleotide Array Sequence Analysis</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Messenger - metabolism</topic><topic>Sequence Homology, Amino Acid</topic><topic>Spermatogenesis - genetics</topic><topic>Testis - growth & development</topic><topic>Testis - metabolism</topic><topic>Tissue Distribution</topic><topic>Transcription Factors</topic><topic>Vertebrates: reproduction</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cheng, Li Jun</creatorcontrib><creatorcontrib>Li, Jian Min</creatorcontrib><creatorcontrib>Chen, Jing</creatorcontrib><creatorcontrib>Ge, Ye Hua</creatorcontrib><creatorcontrib>Yu, Zuo Ren</creatorcontrib><creatorcontrib>Han, Dai Shu</creatorcontrib><creatorcontrib>Zhou, Zuo Min</creatorcontrib><creatorcontrib>Sha, Jia Hao</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><jtitle>Biology of reproduction</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Cheng, Li Jun</au><au>Li, Jian Min</au><au>Chen, Jing</au><au>Ge, Ye Hua</au><au>Yu, Zuo Ren</au><au>Han, Dai Shu</au><au>Zhou, Zuo Min</au><au>Sha, Jia Hao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>NYD-SP16, a Novel Gene Associated with Spermatogenesis of Human Testis</atitle><jtitle>Biology of reproduction</jtitle><addtitle>Biol Reprod</addtitle><date>2003-01-01</date><risdate>2003</risdate><volume>68</volume><issue>1</issue><spage>190</spage><epage>198</epage><pages>190-198</pages><issn>0006-3363</issn><eissn>1529-7268</eissn><coden>BIREBV</coden><abstract>By hybridizing human adult testis cDNA microarrays with human adult and embryo testis cDNA probes, a novel human testis gene
NYD-SP16 was identified. NYD-SP16 expression was 6.44-fold higher in adult testis than in fetal testis. NYD-SP16 contains 1595 base pairs (bp) and a 762-bp open reading frame encoding a 254-amino acid protein with 73% amino acid sequence
identity with the mouse testis homologous protein. The NYD-SP16 gene was localized to human chromosome 5q14. The deduced structure of the NYD-SP16 protein contains one transmembrane domain,
which was confirmed by GFP/NYD-SP16 fusion protein expression in the cytomembrane of the transfected human choriocarcinoma
JAR cells, suggesting that it is a transmembrane protein. Multiple tissue distribution indicated that NYD-SP16 mRNA is highly expressed in the testes and pancreas, with little or no expression elsewhere. Further analysis of abnormal
expression in infertile male patients revealed complete absence of NYD-SP16 in the testes of patients with Sertoli-cell-only syndrome and variable expression in patients with spermatogenic arrest.
Homologous gene expression in mouse testis was confirmed in spermatogenic cells by in situ hybridization. The results of cDNA
microarray, in situ hybridization, and semiquantitative polymerase chain reaction in mouse testis of different stages indicated
that NYD-SP16 expression is developmentally regulated. These results suggest that the putative NYD-SP16 protein may play an important role
in testicular development/spermatogenesis and may be an important factor in male infertility.</abstract><cop>Madison, WI</cop><pub>Society for the Study of Reproduction</pub><pmid>12493713</pmid><doi>10.1095/biolreprod.102.004242</doi><tpages>9</tpages></addata></record> |
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subjects | Adult Amino Acid Sequence Animals Base Sequence Biological and medical sciences Chromosomes, Human, Pair 5 - genetics DNA, Complementary - genetics Fetus - metabolism Fundamental and applied biological sciences. Psychology Gene Expression Regulation, Developmental Humans In Situ Hybridization Infertility, Male - genetics Infertility, Male - metabolism Male Mammalian male genital system Membrane Proteins - chemistry Membrane Proteins - genetics Mice Molecular Sequence Data Morphology. Physiology Oligonucleotide Array Sequence Analysis RNA, Messenger - genetics RNA, Messenger - metabolism Sequence Homology, Amino Acid Spermatogenesis - genetics Testis - growth & development Testis - metabolism Tissue Distribution Transcription Factors Vertebrates: reproduction |
title | NYD-SP16, a Novel Gene Associated with Spermatogenesis of Human Testis |
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