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Identification and characterization of the new gene rhtA involved in threonine and homoserine efflux in Escherichia coli
The rhtA gene known as the ybiF ORF in the genome of Escherichia coli was identified as a new gene involved in threonine and homoserine efflux. This gene encodes a highly hydrophobic membrane protein that contains 10 predicted transmembrane segments. The rhtA23 mutation, which is an A-for-G substitu...
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Published in: | Research in microbiology 2003-03, Vol.154 (2), p.123-135 |
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creator | Livshits, Vitaliy A. Zakataeva, Natalia P. Aleshin, Vladimir V. Vitushkina, Maria V. |
description | The
rhtA gene known as the
ybiF ORF in the genome of
Escherichia coli was identified as a new gene involved in threonine and homoserine efflux. This gene encodes a highly hydrophobic membrane protein that contains 10 predicted transmembrane segments. The
rhtA23 mutation, which is an A-for-G substitution at position −1 in relation to the ATG start codon, increases the expression level of the
rhtA gene. The overexpression of
rhtA gene results in resistance to inhibitory concentrations of homoserine, threonine and a variety of other amino acids and amino acid analogues, reduced threonine and homoserine accumulation in resistant cells and increased production of threonine, homoserine, lysine and proline by the respective producing strains. The RhtA protein belongs to a vast family of transporters. The genome of
E. coli contains at least 10 paralogues of RhtA. Phylogenetic analysis indicates that a common ancestor of living organisms contained several RhtA homologues. |
doi_str_mv | 10.1016/S0923-2508(03)00036-6 |
format | article |
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rhtA gene known as the
ybiF ORF in the genome of
Escherichia coli was identified as a new gene involved in threonine and homoserine efflux. This gene encodes a highly hydrophobic membrane protein that contains 10 predicted transmembrane segments. The
rhtA23 mutation, which is an A-for-G substitution at position −1 in relation to the ATG start codon, increases the expression level of the
rhtA gene. The overexpression of
rhtA gene results in resistance to inhibitory concentrations of homoserine, threonine and a variety of other amino acids and amino acid analogues, reduced threonine and homoserine accumulation in resistant cells and increased production of threonine, homoserine, lysine and proline by the respective producing strains. The RhtA protein belongs to a vast family of transporters. The genome of
E. coli contains at least 10 paralogues of RhtA. Phylogenetic analysis indicates that a common ancestor of living organisms contained several RhtA homologues.</description><identifier>ISSN: 0923-2508</identifier><identifier>EISSN: 1769-7123</identifier><identifier>DOI: 10.1016/S0923-2508(03)00036-6</identifier><identifier>PMID: 12648727</identifier><language>eng</language><publisher>Paris: Elsevier SAS</publisher><subject>Amino Acid Sequence ; Amino Acid Substitution ; Amino Acids - metabolism ; Amino Acids - pharmacology ; Base Sequence ; Efflux ; Escherichia coli - drug effects ; Escherichia coli - genetics ; Escherichia coli - metabolism ; Escherichia coli Proteins - chemistry ; Escherichia coli Proteins - genetics ; Escherichia coli Proteins - metabolism ; Homoserine ; Homoserine - metabolism ; Membrane protein ; Membrane Proteins - chemistry ; Membrane Proteins - genetics ; Membrane Proteins - metabolism ; Microbial Sensitivity Tests ; Molecular Sequence Data ; Phylogeny ; Sequence Analysis, Protein ; Threonine ; Threonine - metabolism ; Transport</subject><ispartof>Research in microbiology, 2003-03, Vol.154 (2), p.123-135</ispartof><rights>2003 Éditions scientifiques et médicales Elsevier SAS</rights><rights>2004 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c535t-55e2bb17a7ce032fb277d50e7ba565bde1ff51b717cd4f3e763e3d688dc067803</citedby><cites>FETCH-LOGICAL-c535t-55e2bb17a7ce032fb277d50e7ba565bde1ff51b717cd4f3e763e3d688dc067803</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=14623060$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12648727$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Livshits, Vitaliy A.</creatorcontrib><creatorcontrib>Zakataeva, Natalia P.</creatorcontrib><creatorcontrib>Aleshin, Vladimir V.</creatorcontrib><creatorcontrib>Vitushkina, Maria V.</creatorcontrib><title>Identification and characterization of the new gene rhtA involved in threonine and homoserine efflux in Escherichia coli</title><title>Research in microbiology</title><addtitle>Res Microbiol</addtitle><description>The
rhtA gene known as the
ybiF ORF in the genome of
Escherichia coli was identified as a new gene involved in threonine and homoserine efflux. This gene encodes a highly hydrophobic membrane protein that contains 10 predicted transmembrane segments. The
rhtA23 mutation, which is an A-for-G substitution at position −1 in relation to the ATG start codon, increases the expression level of the
rhtA gene. The overexpression of
rhtA gene results in resistance to inhibitory concentrations of homoserine, threonine and a variety of other amino acids and amino acid analogues, reduced threonine and homoserine accumulation in resistant cells and increased production of threonine, homoserine, lysine and proline by the respective producing strains. The RhtA protein belongs to a vast family of transporters. The genome of
E. coli contains at least 10 paralogues of RhtA. Phylogenetic analysis indicates that a common ancestor of living organisms contained several RhtA homologues.</description><subject>Amino Acid Sequence</subject><subject>Amino Acid Substitution</subject><subject>Amino Acids - metabolism</subject><subject>Amino Acids - pharmacology</subject><subject>Base Sequence</subject><subject>Efflux</subject><subject>Escherichia coli - drug effects</subject><subject>Escherichia coli - genetics</subject><subject>Escherichia coli - metabolism</subject><subject>Escherichia coli Proteins - chemistry</subject><subject>Escherichia coli Proteins - genetics</subject><subject>Escherichia coli Proteins - metabolism</subject><subject>Homoserine</subject><subject>Homoserine - metabolism</subject><subject>Membrane protein</subject><subject>Membrane Proteins - chemistry</subject><subject>Membrane Proteins - genetics</subject><subject>Membrane Proteins - metabolism</subject><subject>Microbial Sensitivity Tests</subject><subject>Molecular Sequence Data</subject><subject>Phylogeny</subject><subject>Sequence Analysis, Protein</subject><subject>Threonine</subject><subject>Threonine - metabolism</subject><subject>Transport</subject><issn>0923-2508</issn><issn>1769-7123</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><recordid>eNqFkU1v1DAQhi0EotvCTwDlAiqHgD9iO3uqqqpApUocgLPljMfEKGsXO7sUfj3O7ooee_J45nnHnnkJecXoe0aZ-vCVrrlouaT9ORXvKKVCteoJWTGt1q1mXDwlq__ICTkt5SelTGrdPScnjKuu11yvyP2NwzgHH8DOIcXGRtfAaLOFGXP4e0gm38wjNhF_Nz8wYpPH-bIJcZemHboa1GrGFEMtLfoxbVKp6npF76ft_YJcFxhrDsZgG0hTeEGeeTsVfHk8z8j3j9ffrj63t18-3Vxd3rYghZxbKZEPA9NWA1LB_cC1dpKiHqxUcnDIvJds0EyD67xArQQKp_reAVW6p-KMvD30vcvp1xbLbDahAE6TjZi2xWjBWKfY-lGQ9ZoJvgflAYScSsnozV0OG5v_GEbN4o3Ze2OWxRsqzN4bo6ru9fGB7bBB96A6mlGBN0fAFrCTzzZCKA9cp7igahnp4sBh3dsuYDYFAkZAFzLCbFwKj3zlH1SCrMQ</recordid><startdate>20030301</startdate><enddate>20030301</enddate><creator>Livshits, Vitaliy A.</creator><creator>Zakataeva, Natalia P.</creator><creator>Aleshin, Vladimir V.</creator><creator>Vitushkina, Maria V.</creator><general>Elsevier SAS</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>20030301</creationdate><title>Identification and characterization of the new gene rhtA involved in threonine and homoserine efflux in Escherichia coli</title><author>Livshits, Vitaliy A. ; Zakataeva, Natalia P. ; Aleshin, Vladimir V. ; Vitushkina, Maria V.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c535t-55e2bb17a7ce032fb277d50e7ba565bde1ff51b717cd4f3e763e3d688dc067803</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Amino Acid Sequence</topic><topic>Amino Acid Substitution</topic><topic>Amino Acids - metabolism</topic><topic>Amino Acids - pharmacology</topic><topic>Base Sequence</topic><topic>Efflux</topic><topic>Escherichia coli - drug effects</topic><topic>Escherichia coli - genetics</topic><topic>Escherichia coli - metabolism</topic><topic>Escherichia coli Proteins - chemistry</topic><topic>Escherichia coli Proteins - genetics</topic><topic>Escherichia coli Proteins - metabolism</topic><topic>Homoserine</topic><topic>Homoserine - metabolism</topic><topic>Membrane protein</topic><topic>Membrane Proteins - chemistry</topic><topic>Membrane Proteins - genetics</topic><topic>Membrane Proteins - metabolism</topic><topic>Microbial Sensitivity Tests</topic><topic>Molecular Sequence Data</topic><topic>Phylogeny</topic><topic>Sequence Analysis, Protein</topic><topic>Threonine</topic><topic>Threonine - metabolism</topic><topic>Transport</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Livshits, Vitaliy A.</creatorcontrib><creatorcontrib>Zakataeva, Natalia P.</creatorcontrib><creatorcontrib>Aleshin, Vladimir V.</creatorcontrib><creatorcontrib>Vitushkina, Maria V.</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>Research in microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Livshits, Vitaliy A.</au><au>Zakataeva, Natalia P.</au><au>Aleshin, Vladimir V.</au><au>Vitushkina, Maria V.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification and characterization of the new gene rhtA involved in threonine and homoserine efflux in Escherichia coli</atitle><jtitle>Research in microbiology</jtitle><addtitle>Res Microbiol</addtitle><date>2003-03-01</date><risdate>2003</risdate><volume>154</volume><issue>2</issue><spage>123</spage><epage>135</epage><pages>123-135</pages><issn>0923-2508</issn><eissn>1769-7123</eissn><abstract>The
rhtA gene known as the
ybiF ORF in the genome of
Escherichia coli was identified as a new gene involved in threonine and homoserine efflux. This gene encodes a highly hydrophobic membrane protein that contains 10 predicted transmembrane segments. The
rhtA23 mutation, which is an A-for-G substitution at position −1 in relation to the ATG start codon, increases the expression level of the
rhtA gene. The overexpression of
rhtA gene results in resistance to inhibitory concentrations of homoserine, threonine and a variety of other amino acids and amino acid analogues, reduced threonine and homoserine accumulation in resistant cells and increased production of threonine, homoserine, lysine and proline by the respective producing strains. The RhtA protein belongs to a vast family of transporters. The genome of
E. coli contains at least 10 paralogues of RhtA. Phylogenetic analysis indicates that a common ancestor of living organisms contained several RhtA homologues.</abstract><cop>Paris</cop><pub>Elsevier SAS</pub><pmid>12648727</pmid><doi>10.1016/S0923-2508(03)00036-6</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record> |
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source | ScienceDirect Freedom Collection |
subjects | Amino Acid Sequence Amino Acid Substitution Amino Acids - metabolism Amino Acids - pharmacology Base Sequence Efflux Escherichia coli - drug effects Escherichia coli - genetics Escherichia coli - metabolism Escherichia coli Proteins - chemistry Escherichia coli Proteins - genetics Escherichia coli Proteins - metabolism Homoserine Homoserine - metabolism Membrane protein Membrane Proteins - chemistry Membrane Proteins - genetics Membrane Proteins - metabolism Microbial Sensitivity Tests Molecular Sequence Data Phylogeny Sequence Analysis, Protein Threonine Threonine - metabolism Transport |
title | Identification and characterization of the new gene rhtA involved in threonine and homoserine efflux in Escherichia coli |
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