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Association of the amino acid motifs of BoLA-DRB3 alleles with mastitis pathogens in Japanese Holstein cows
ABSTRACT The association of the polymorphism of bovine leukocyte antigen (BoLA‐DRB3) genes, identified by the polymerase chain reaction sequence‐based typing (PCR‐SBT) method, with resistance and susceptibility to mastitis caused by Streptococci, coagulase‐negative Staphylococci, Escherichia coli an...
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Published in: | Animal science journal 2009-10, Vol.80 (5), p.510-519 |
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creator | Yoshida, T., Nippon Veterinary and Life Science Univ., Musashino, Tokyo (Japan) Mukoyama, H Furuta, H Kondo, Y Takeshima, S Aida, Y Kosugiyama, M Tomogane, H |
description | ABSTRACT
The association of the polymorphism of bovine leukocyte antigen (BoLA‐DRB3) genes, identified by the polymerase chain reaction sequence‐based typing (PCR‐SBT) method, with resistance and susceptibility to mastitis caused by Streptococci, coagulase‐negative Staphylococci, Escherichia coli and Staphylococcus aureus was investigated. Blood samples for DNA extraction were collected from 170 Holstein cows (129 mastitis and 41 healthy cows) from 5 districts in Chiba prefecture, Japan. Susceptibility or resistance to the mastitis‐causing pathogens was thought to vary by the presence of amino acid substitutions at the 9, 11, 13, and 30 positions. DRB3*0101 and DRB3*1501 had amino acid motifs of Glu9, Ser11, Ser13, and Tyr30, and they were considered to have susceptibility to all 4 mastitis pathogens. In contrast, DRB3*1101 and DRB3*1401 had amino acid motifs of Gln9, His11, Gly13, and His30 in these positions, and they also had Val86, so these alleles were considered to have resistance to Streptococcal and coagulase‐negative Staphylococcal mastitis. However, in the case of Escherichia coli mastitis, amino acid substitutions at the 9, 11, 13, and 30 positions had little effect, but rather substitutions at the 47, 67 positions of pocket 7, and at the 71, 74 positions of pocket 4, Tyr47, Ile67, Ala71, and Ala74, were associated with resistance. This motif was present in DRB3*1201. |
doi_str_mv | 10.1111/j.1740-0929.2009.00664.x |
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The association of the polymorphism of bovine leukocyte antigen (BoLA‐DRB3) genes, identified by the polymerase chain reaction sequence‐based typing (PCR‐SBT) method, with resistance and susceptibility to mastitis caused by Streptococci, coagulase‐negative Staphylococci, Escherichia coli and Staphylococcus aureus was investigated. Blood samples for DNA extraction were collected from 170 Holstein cows (129 mastitis and 41 healthy cows) from 5 districts in Chiba prefecture, Japan. Susceptibility or resistance to the mastitis‐causing pathogens was thought to vary by the presence of amino acid substitutions at the 9, 11, 13, and 30 positions. DRB3*0101 and DRB3*1501 had amino acid motifs of Glu9, Ser11, Ser13, and Tyr30, and they were considered to have susceptibility to all 4 mastitis pathogens. In contrast, DRB3*1101 and DRB3*1401 had amino acid motifs of Gln9, His11, Gly13, and His30 in these positions, and they also had Val86, so these alleles were considered to have resistance to Streptococcal and coagulase‐negative Staphylococcal mastitis. However, in the case of Escherichia coli mastitis, amino acid substitutions at the 9, 11, 13, and 30 positions had little effect, but rather substitutions at the 47, 67 positions of pocket 7, and at the 71, 74 positions of pocket 4, Tyr47, Ile67, Ala71, and Ala74, were associated with resistance. This motif was present in DRB3*1201.</description><identifier>ISSN: 1344-3941</identifier><identifier>EISSN: 1740-0929</identifier><identifier>DOI: 10.1111/j.1740-0929.2009.00664.x</identifier><identifier>PMID: 20163614</identifier><language>eng</language><publisher>Melbourne, Australia: Blackwell Publishing Asia</publisher><subject>AGENT PATHOGENE ; Alleles ; amino acid motif ; AMINO ACID SEQUENCES ; Amino Acid Substitution ; Amino acids ; Animal diseases ; Animal sciences ; Animals ; Bacteria ; Bacterial Infections - genetics ; Bacterial Infections - microbiology ; Bacterial Infections - veterinary ; BoLA-DRB3 ; Cattle ; DAIRY COWS ; Deoxyribonucleic acid ; Disease Susceptibility ; DNA ; Escherichia coli ; Escherichia coli - pathogenicity ; Female ; GENE ; GENES ; GENETIC ENGINEERING ; GENIE GENETIQUE ; Histocompatibility Antigens Class II - genetics ; http://www.fao.org/aos/agrovoc#c_15974 ; http://www.fao.org/aos/agrovoc#c_26767 ; http://www.fao.org/aos/agrovoc#c_3214 ; http://www.fao.org/aos/agrovoc#c_34079 ; http://www.fao.org/aos/agrovoc#c_37202 ; http://www.fao.org/aos/agrovoc#c_4644 ; http://www.fao.org/aos/agrovoc#c_5630 ; Immunity, Innate - genetics ; INGENIERIA GENETICA ; MAMMITE ; MASTITIS ; Mastitis, Bovine - genetics ; Mastitis, Bovine - microbiology ; ORGANISMOS PATOGENOS ; pathogen ; PATHOGENS ; PCR ; PCR-SBT ; Polymorphism ; Polymorphism, Genetic ; SECUENCIAS DE AMINOACIDOS ; SEQUENCE D'ACIDES AMINES ; Staphylococcus aureus ; Staphylococcus aureus - pathogenicity ; Streptococcus ; Streptococcus - pathogenicity ; VACAS LECHERAS ; VACHE LAITIERE</subject><ispartof>Animal science journal, 2009-10, Vol.80 (5), p.510-519</ispartof><rights>2009 The Authors. Journal compilation © 2009 Japanese Society of Animal Science</rights><rights>Journal compilation © 2009 Japanese Society of Animal Science</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5384-602288403761cc2be07d20e9898ba5bf1cc07445c2cb4b128024ff857dd0ce193</citedby><cites>FETCH-LOGICAL-c5384-602288403761cc2be07d20e9898ba5bf1cc07445c2cb4b128024ff857dd0ce193</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20163614$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yoshida, T., Nippon Veterinary and Life Science Univ., Musashino, Tokyo (Japan)</creatorcontrib><creatorcontrib>Mukoyama, H</creatorcontrib><creatorcontrib>Furuta, H</creatorcontrib><creatorcontrib>Kondo, Y</creatorcontrib><creatorcontrib>Takeshima, S</creatorcontrib><creatorcontrib>Aida, Y</creatorcontrib><creatorcontrib>Kosugiyama, M</creatorcontrib><creatorcontrib>Tomogane, H</creatorcontrib><title>Association of the amino acid motifs of BoLA-DRB3 alleles with mastitis pathogens in Japanese Holstein cows</title><title>Animal science journal</title><addtitle>Anim Sci J</addtitle><description>ABSTRACT
The association of the polymorphism of bovine leukocyte antigen (BoLA‐DRB3) genes, identified by the polymerase chain reaction sequence‐based typing (PCR‐SBT) method, with resistance and susceptibility to mastitis caused by Streptococci, coagulase‐negative Staphylococci, Escherichia coli and Staphylococcus aureus was investigated. Blood samples for DNA extraction were collected from 170 Holstein cows (129 mastitis and 41 healthy cows) from 5 districts in Chiba prefecture, Japan. Susceptibility or resistance to the mastitis‐causing pathogens was thought to vary by the presence of amino acid substitutions at the 9, 11, 13, and 30 positions. DRB3*0101 and DRB3*1501 had amino acid motifs of Glu9, Ser11, Ser13, and Tyr30, and they were considered to have susceptibility to all 4 mastitis pathogens. In contrast, DRB3*1101 and DRB3*1401 had amino acid motifs of Gln9, His11, Gly13, and His30 in these positions, and they also had Val86, so these alleles were considered to have resistance to Streptococcal and coagulase‐negative Staphylococcal mastitis. However, in the case of Escherichia coli mastitis, amino acid substitutions at the 9, 11, 13, and 30 positions had little effect, but rather substitutions at the 47, 67 positions of pocket 7, and at the 71, 74 positions of pocket 4, Tyr47, Ile67, Ala71, and Ala74, were associated with resistance. This motif was present in DRB3*1201.</description><subject>AGENT PATHOGENE</subject><subject>Alleles</subject><subject>amino acid motif</subject><subject>AMINO ACID SEQUENCES</subject><subject>Amino Acid Substitution</subject><subject>Amino acids</subject><subject>Animal diseases</subject><subject>Animal sciences</subject><subject>Animals</subject><subject>Bacteria</subject><subject>Bacterial Infections - genetics</subject><subject>Bacterial Infections - microbiology</subject><subject>Bacterial Infections - veterinary</subject><subject>BoLA-DRB3</subject><subject>Cattle</subject><subject>DAIRY COWS</subject><subject>Deoxyribonucleic acid</subject><subject>Disease Susceptibility</subject><subject>DNA</subject><subject>Escherichia coli</subject><subject>Escherichia coli - pathogenicity</subject><subject>Female</subject><subject>GENE</subject><subject>GENES</subject><subject>GENETIC ENGINEERING</subject><subject>GENIE GENETIQUE</subject><subject>Histocompatibility Antigens Class II - genetics</subject><subject>http://www.fao.org/aos/agrovoc#c_15974</subject><subject>http://www.fao.org/aos/agrovoc#c_26767</subject><subject>http://www.fao.org/aos/agrovoc#c_3214</subject><subject>http://www.fao.org/aos/agrovoc#c_34079</subject><subject>http://www.fao.org/aos/agrovoc#c_37202</subject><subject>http://www.fao.org/aos/agrovoc#c_4644</subject><subject>http://www.fao.org/aos/agrovoc#c_5630</subject><subject>Immunity, Innate - genetics</subject><subject>INGENIERIA GENETICA</subject><subject>MAMMITE</subject><subject>MASTITIS</subject><subject>Mastitis, Bovine - genetics</subject><subject>Mastitis, Bovine - microbiology</subject><subject>ORGANISMOS PATOGENOS</subject><subject>pathogen</subject><subject>PATHOGENS</subject><subject>PCR</subject><subject>PCR-SBT</subject><subject>Polymorphism</subject><subject>Polymorphism, Genetic</subject><subject>SECUENCIAS DE AMINOACIDOS</subject><subject>SEQUENCE D'ACIDES AMINES</subject><subject>Staphylococcus aureus</subject><subject>Staphylococcus aureus - pathogenicity</subject><subject>Streptococcus</subject><subject>Streptococcus - pathogenicity</subject><subject>VACAS LECHERAS</subject><subject>VACHE LAITIERE</subject><issn>1344-3941</issn><issn>1740-0929</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><recordid>eNqNkU1v1DAQhiMEou3CTwBZHOCUMP5OJC7bUlpWy2eLkLhYjuN0vU3iJc5qt_8eh5Q9cEDMxaOZ5x3N-E0ShCHDMV6vMywZpFCQIiMARQYgBMv2D5LjQ-NhzCljKS0YPkpOQlgDYFkAf5wcEcCCCsyOk9t5CN44PTjfIV-jYWWRbl3nkTauQq0fXB3GxqlfztO3X08p0k1jGxvQzg0r1OowuMEFtNHDyt_YLiDXoYXe6M4Giy59EwYbK8bvwpPkUa2bYJ_ev7Pk27vz67PLdPnp4v3ZfJkaTnOWCiAkzxlQKbAxpLQgKwK2yIu81LysYxEkY9wQU7ISkxwIq-ucy6oCY3FBZ8mrae6m9z-3NgyqdcHYpok7-W1QklLOmBA4ki__SRJMOCHxr2bJi7_Atd_2XbwiMrngTGKIUD5Bpvch9LZWm961ur9TGNTom1qr0R412qNG39Rv39Q-Sp_fz9-Wra0Owj9GReDNBOxcY-_-e7CaXy1iEuXpJHfRjv1BrvtbJSSVXH3_eKEgFx_Ij6tr9SXyzya-1l7pm94Ftfgcl4EYnBL6C1gLvAA</recordid><startdate>200910</startdate><enddate>200910</enddate><creator>Yoshida, T., Nippon Veterinary and Life Science Univ., Musashino, Tokyo (Japan)</creator><creator>Mukoyama, H</creator><creator>Furuta, H</creator><creator>Kondo, Y</creator><creator>Takeshima, S</creator><creator>Aida, Y</creator><creator>Kosugiyama, M</creator><creator>Tomogane, H</creator><general>Blackwell Publishing Asia</general><general>Blackwell Publishing Ltd</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T7</scope><scope>7TK</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>200910</creationdate><title>Association of the amino acid motifs of BoLA-DRB3 alleles with mastitis pathogens in Japanese Holstein cows</title><author>Yoshida, T., Nippon Veterinary and Life Science Univ., Musashino, Tokyo (Japan) ; Mukoyama, H ; Furuta, H ; Kondo, Y ; Takeshima, S ; Aida, Y ; Kosugiyama, M ; Tomogane, H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5384-602288403761cc2be07d20e9898ba5bf1cc07445c2cb4b128024ff857dd0ce193</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>AGENT PATHOGENE</topic><topic>Alleles</topic><topic>amino acid motif</topic><topic>AMINO ACID SEQUENCES</topic><topic>Amino Acid Substitution</topic><topic>Amino acids</topic><topic>Animal diseases</topic><topic>Animal sciences</topic><topic>Animals</topic><topic>Bacteria</topic><topic>Bacterial Infections - genetics</topic><topic>Bacterial Infections - microbiology</topic><topic>Bacterial Infections - veterinary</topic><topic>BoLA-DRB3</topic><topic>Cattle</topic><topic>DAIRY COWS</topic><topic>Deoxyribonucleic acid</topic><topic>Disease Susceptibility</topic><topic>DNA</topic><topic>Escherichia coli</topic><topic>Escherichia coli - pathogenicity</topic><topic>Female</topic><topic>GENE</topic><topic>GENES</topic><topic>GENETIC ENGINEERING</topic><topic>GENIE GENETIQUE</topic><topic>Histocompatibility Antigens Class II - genetics</topic><topic>http://www.fao.org/aos/agrovoc#c_15974</topic><topic>http://www.fao.org/aos/agrovoc#c_26767</topic><topic>http://www.fao.org/aos/agrovoc#c_3214</topic><topic>http://www.fao.org/aos/agrovoc#c_34079</topic><topic>http://www.fao.org/aos/agrovoc#c_37202</topic><topic>http://www.fao.org/aos/agrovoc#c_4644</topic><topic>http://www.fao.org/aos/agrovoc#c_5630</topic><topic>Immunity, Innate - genetics</topic><topic>INGENIERIA GENETICA</topic><topic>MAMMITE</topic><topic>MASTITIS</topic><topic>Mastitis, Bovine - genetics</topic><topic>Mastitis, Bovine - microbiology</topic><topic>ORGANISMOS PATOGENOS</topic><topic>pathogen</topic><topic>PATHOGENS</topic><topic>PCR</topic><topic>PCR-SBT</topic><topic>Polymorphism</topic><topic>Polymorphism, Genetic</topic><topic>SECUENCIAS DE AMINOACIDOS</topic><topic>SEQUENCE D'ACIDES AMINES</topic><topic>Staphylococcus aureus</topic><topic>Staphylococcus aureus - pathogenicity</topic><topic>Streptococcus</topic><topic>Streptococcus - pathogenicity</topic><topic>VACAS LECHERAS</topic><topic>VACHE LAITIERE</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yoshida, T., Nippon Veterinary and Life Science Univ., Musashino, Tokyo (Japan)</creatorcontrib><creatorcontrib>Mukoyama, H</creatorcontrib><creatorcontrib>Furuta, H</creatorcontrib><creatorcontrib>Kondo, Y</creatorcontrib><creatorcontrib>Takeshima, S</creatorcontrib><creatorcontrib>Aida, Y</creatorcontrib><creatorcontrib>Kosugiyama, M</creatorcontrib><creatorcontrib>Tomogane, H</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Animal science journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yoshida, T., Nippon Veterinary and Life Science Univ., Musashino, Tokyo (Japan)</au><au>Mukoyama, H</au><au>Furuta, H</au><au>Kondo, Y</au><au>Takeshima, S</au><au>Aida, Y</au><au>Kosugiyama, M</au><au>Tomogane, H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Association of the amino acid motifs of BoLA-DRB3 alleles with mastitis pathogens in Japanese Holstein cows</atitle><jtitle>Animal science journal</jtitle><addtitle>Anim Sci J</addtitle><date>2009-10</date><risdate>2009</risdate><volume>80</volume><issue>5</issue><spage>510</spage><epage>519</epage><pages>510-519</pages><issn>1344-3941</issn><eissn>1740-0929</eissn><abstract>ABSTRACT
The association of the polymorphism of bovine leukocyte antigen (BoLA‐DRB3) genes, identified by the polymerase chain reaction sequence‐based typing (PCR‐SBT) method, with resistance and susceptibility to mastitis caused by Streptococci, coagulase‐negative Staphylococci, Escherichia coli and Staphylococcus aureus was investigated. Blood samples for DNA extraction were collected from 170 Holstein cows (129 mastitis and 41 healthy cows) from 5 districts in Chiba prefecture, Japan. Susceptibility or resistance to the mastitis‐causing pathogens was thought to vary by the presence of amino acid substitutions at the 9, 11, 13, and 30 positions. DRB3*0101 and DRB3*1501 had amino acid motifs of Glu9, Ser11, Ser13, and Tyr30, and they were considered to have susceptibility to all 4 mastitis pathogens. In contrast, DRB3*1101 and DRB3*1401 had amino acid motifs of Gln9, His11, Gly13, and His30 in these positions, and they also had Val86, so these alleles were considered to have resistance to Streptococcal and coagulase‐negative Staphylococcal mastitis. However, in the case of Escherichia coli mastitis, amino acid substitutions at the 9, 11, 13, and 30 positions had little effect, but rather substitutions at the 47, 67 positions of pocket 7, and at the 71, 74 positions of pocket 4, Tyr47, Ile67, Ala71, and Ala74, were associated with resistance. This motif was present in DRB3*1201.</abstract><cop>Melbourne, Australia</cop><pub>Blackwell Publishing Asia</pub><pmid>20163614</pmid><doi>10.1111/j.1740-0929.2009.00664.x</doi><tpages>10</tpages></addata></record> |
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subjects | AGENT PATHOGENE Alleles amino acid motif AMINO ACID SEQUENCES Amino Acid Substitution Amino acids Animal diseases Animal sciences Animals Bacteria Bacterial Infections - genetics Bacterial Infections - microbiology Bacterial Infections - veterinary BoLA-DRB3 Cattle DAIRY COWS Deoxyribonucleic acid Disease Susceptibility DNA Escherichia coli Escherichia coli - pathogenicity Female GENE GENES GENETIC ENGINEERING GENIE GENETIQUE Histocompatibility Antigens Class II - genetics http://www.fao.org/aos/agrovoc#c_15974 http://www.fao.org/aos/agrovoc#c_26767 http://www.fao.org/aos/agrovoc#c_3214 http://www.fao.org/aos/agrovoc#c_34079 http://www.fao.org/aos/agrovoc#c_37202 http://www.fao.org/aos/agrovoc#c_4644 http://www.fao.org/aos/agrovoc#c_5630 Immunity, Innate - genetics INGENIERIA GENETICA MAMMITE MASTITIS Mastitis, Bovine - genetics Mastitis, Bovine - microbiology ORGANISMOS PATOGENOS pathogen PATHOGENS PCR PCR-SBT Polymorphism Polymorphism, Genetic SECUENCIAS DE AMINOACIDOS SEQUENCE D'ACIDES AMINES Staphylococcus aureus Staphylococcus aureus - pathogenicity Streptococcus Streptococcus - pathogenicity VACAS LECHERAS VACHE LAITIERE |
title | Association of the amino acid motifs of BoLA-DRB3 alleles with mastitis pathogens in Japanese Holstein cows |
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