Digital extractor: analysis of digital differential display output

Digital Extractor is a program for the high-throughput processing of data sets derived from digital differential display-based comparisons of EST libraries. These comparisons can be utilized to identify discrete subsets of genes whose expression is restricted to distinct tissue types. The program fa...

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Bibliographic Details
Published in:Bioinformatics 2003-08, Vol.19 (12), p.1594-1595
Main Authors: Madden, Stephen F., O’Donovan, Barry, Furney, Simon J., Brady, Hugh R., Silvestre, Guenole, Doran, Peter P.
Format: Article
Language:English
Subjects:
Biological and medical sciences
Database Management Systems
Databases, Nucleic Acid
Documentation
Expressed Sequence Tags
Fundamental and applied biological sciences. Psychology
Gene Expression Profiling - methods
Gene Library
General aspects
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Sequence Alignment - methods
Sequence Analysis, DNA - methods
Software
User-Computer Interface
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Description
Summary:Digital Extractor is a program for the high-throughput processing of data sets derived from digital differential display-based comparisons of EST libraries. These comparisons can be utilized to identify discrete subsets of genes whose expression is restricted to distinct tissue types. The program facilitates these investigations by permitting parallel annotation of genes identified as being differentially expressed. Availability: The executable program, suitable for use on all UNIX-based platforms is freely available to non-profit users. Contact: pdoran.genome@mater.ie * To whom correspondence should be addressed.
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/btg198