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Contrasting coarse and fine scale genetic structure among isolated relic populations of Kmeria septentrionalis
Trees of the Magnoliaceae family are of scientific, cultural and socio-economic importance. Kmeria septentrionalis Dandy (Magnoliaceae) is a dioecious tree, found in small, isolated, relic populations in Southern China, and is subject to extensive protection due to its rarity and high economic value...
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Published in: | Genetica 2010-10, Vol.138 (9-10), p.939-944 |
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description | Trees of the Magnoliaceae family are of scientific, cultural and socio-economic importance. Kmeria septentrionalis Dandy (Magnoliaceae) is a dioecious tree, found in small, isolated, relic populations in Southern China, and is subject to extensive protection due to its rarity and high economic values. To improve conservation outcomes and in particular, germplasm collection guidelines, information on spatial genetic structure of the species is required. In this study, we investigated the spatial genetic structure and genetic diversity of 161 individuals of K. septentrionalis collected from five natural populations using AFLP molecular markers. Within-population genetic variation was measured, with percentage of polymorphic bands (PPB) ranged from 63% to 87%, while H S (genetic diversity within population) varied from 0.185 to 0.244 with a mean of 0.215 ± 0.025. Significant genetic differentiations were revealed between pairwise populations, indicating each population existing as an independent evolutionarily significant unit. Mantel test results showed no pattern of isolation-by-distance among populations separated by large distance. Fine scale spatial patterns of genetic variation suggested significant effects of isolation-by-distance within population at distances of 22 m. The results of contrasting genetic structure at coarse and fine scale in K. septentrionalis may indicate restricted pollen flow and seed dispersal at fine scales, and separated evolution in isolated populations over long period of time at coarser scales. Finally, we make several suggestions for improved management practices that may assist in the conservation of this species. |
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Kmeria septentrionalis Dandy (Magnoliaceae) is a dioecious tree, found in small, isolated, relic populations in Southern China, and is subject to extensive protection due to its rarity and high economic values. To improve conservation outcomes and in particular, germplasm collection guidelines, information on spatial genetic structure of the species is required. In this study, we investigated the spatial genetic structure and genetic diversity of 161 individuals of K. septentrionalis collected from five natural populations using AFLP molecular markers. Within-population genetic variation was measured, with percentage of polymorphic bands (PPB) ranged from 63% to 87%, while H S (genetic diversity within population) varied from 0.185 to 0.244 with a mean of 0.215 ± 0.025. Significant genetic differentiations were revealed between pairwise populations, indicating each population existing as an independent evolutionarily significant unit. Mantel test results showed no pattern of isolation-by-distance among populations separated by large distance. Fine scale spatial patterns of genetic variation suggested significant effects of isolation-by-distance within population at distances of 22 m. The results of contrasting genetic structure at coarse and fine scale in K. septentrionalis may indicate restricted pollen flow and seed dispersal at fine scales, and separated evolution in isolated populations over long period of time at coarser scales. Finally, we make several suggestions for improved management practices that may assist in the conservation of this species.</description><identifier>ISSN: 0016-6707</identifier><identifier>EISSN: 1573-6857</identifier><identifier>DOI: 10.1007/s10709-010-9475-7</identifier><identifier>PMID: 20661630</identifier><language>eng</language><publisher>Dordrecht: Dordrecht : Springer Netherlands</publisher><subject>AFLP ; Amplified Fragment Length Polymorphism Analysis ; Animal Genetics and Genomics ; Biomedical and Life Sciences ; China ; Conservation ; Conservation of Natural Resources ; Economic importance ; Economics ; Evolutionary Biology ; Gene Flow ; Genetic diversity ; Genetic structure ; Genetic Variation ; Genetics, Population ; Genome, Plant ; Human Genetics ; isolation ; Kmeria septentrionalis ; Life Sciences ; Magnoliaceae - genetics ; Microbial Genetics and Genomics ; Natural populations ; Original Research ; Plant Genetics and Genomics ; Pollen ; Sample Size ; Seed Dispersal ; Spatial autocorrelation analysis</subject><ispartof>Genetica, 2010-10, Vol.138 (9-10), p.939-944</ispartof><rights>Springer Science+Business Media B.V. 2010</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c394t-d4d28ae115d8d2786e4c9e50e9ed340467efbd507f46efb72861c0a0db5a47743</citedby><cites>FETCH-LOGICAL-c394t-d4d28ae115d8d2786e4c9e50e9ed340467efbd507f46efb72861c0a0db5a47743</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20661630$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhao, Jian-Li</creatorcontrib><creatorcontrib>He, Tianhua</creatorcontrib><creatorcontrib>Li, Qiao-Ming</creatorcontrib><title>Contrasting coarse and fine scale genetic structure among isolated relic populations of Kmeria septentrionalis</title><title>Genetica</title><addtitle>Genetica</addtitle><addtitle>Genetica</addtitle><description>Trees of the Magnoliaceae family are of scientific, cultural and socio-economic importance. Kmeria septentrionalis Dandy (Magnoliaceae) is a dioecious tree, found in small, isolated, relic populations in Southern China, and is subject to extensive protection due to its rarity and high economic values. To improve conservation outcomes and in particular, germplasm collection guidelines, information on spatial genetic structure of the species is required. In this study, we investigated the spatial genetic structure and genetic diversity of 161 individuals of K. septentrionalis collected from five natural populations using AFLP molecular markers. Within-population genetic variation was measured, with percentage of polymorphic bands (PPB) ranged from 63% to 87%, while H S (genetic diversity within population) varied from 0.185 to 0.244 with a mean of 0.215 ± 0.025. Significant genetic differentiations were revealed between pairwise populations, indicating each population existing as an independent evolutionarily significant unit. Mantel test results showed no pattern of isolation-by-distance among populations separated by large distance. Fine scale spatial patterns of genetic variation suggested significant effects of isolation-by-distance within population at distances of 22 m. The results of contrasting genetic structure at coarse and fine scale in K. septentrionalis may indicate restricted pollen flow and seed dispersal at fine scales, and separated evolution in isolated populations over long period of time at coarser scales. Finally, we make several suggestions for improved management practices that may assist in the conservation of this species.</description><subject>AFLP</subject><subject>Amplified Fragment Length Polymorphism Analysis</subject><subject>Animal Genetics and Genomics</subject><subject>Biomedical and Life Sciences</subject><subject>China</subject><subject>Conservation</subject><subject>Conservation of Natural Resources</subject><subject>Economic importance</subject><subject>Economics</subject><subject>Evolutionary Biology</subject><subject>Gene Flow</subject><subject>Genetic diversity</subject><subject>Genetic structure</subject><subject>Genetic Variation</subject><subject>Genetics, Population</subject><subject>Genome, Plant</subject><subject>Human Genetics</subject><subject>isolation</subject><subject>Kmeria septentrionalis</subject><subject>Life Sciences</subject><subject>Magnoliaceae - genetics</subject><subject>Microbial Genetics and Genomics</subject><subject>Natural populations</subject><subject>Original Research</subject><subject>Plant Genetics and Genomics</subject><subject>Pollen</subject><subject>Sample Size</subject><subject>Seed Dispersal</subject><subject>Spatial autocorrelation analysis</subject><issn>0016-6707</issn><issn>1573-6857</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><recordid>eNp9kTuP1TAQhS0EYi8LP4AGLBqqwDjxIynRFS-xEgVsbfnakyuvkjh4nIJ_v16ygESBXPgx3zljzWHsuYA3AsC8JQEGhgYENIM0qjEP2EEo0zW6V-YhOwAI3WgD5oI9IboBgMHo4TG7aEFroTs4sOWYlpIdlbicuU8uE3K3BD7GBTl5NyE_44Ilek4lb75suQJzqnSkNLmCgWecanlN61bvMS3E08i_zJij44RrwdqhPrsp0lP2aHQT4bP7_ZJdf3j__fipufr68fPx3VXju0GWJsjQ9g6FUKEPrek1Sj-gAhwwdBKkNjieggIzSl1Ppu218OAgnJSTxsjukr3efdecfmxIxc6RPE6TWzBtZI3SWkupVSVf_UPepC3Xz_6C6ryEaCskdsjnRJRxtGuOs8s_rQB7F4Xdo7A1CnsXhTVV8-LeeDvNGP4ofs--Au0OUC0tZ8x_O__P9eUuGl2y7pwj2etvLYgOxABtXd0t4WKeww</recordid><startdate>20101001</startdate><enddate>20101001</enddate><creator>Zhao, Jian-Li</creator><creator>He, Tianhua</creator><creator>Li, Qiao-Ming</creator><general>Dordrecht : Springer Netherlands</general><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7SN</scope><scope>7SS</scope><scope>7T7</scope><scope>7TK</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PHGZM</scope><scope>PHGZT</scope><scope>PJZUB</scope><scope>PKEHL</scope><scope>PPXIY</scope><scope>PQEST</scope><scope>PQGLB</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20101001</creationdate><title>Contrasting coarse and fine scale genetic structure among isolated relic populations of Kmeria septentrionalis</title><author>Zhao, Jian-Li ; He, Tianhua ; Li, Qiao-Ming</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c394t-d4d28ae115d8d2786e4c9e50e9ed340467efbd507f46efb72861c0a0db5a47743</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>AFLP</topic><topic>Amplified Fragment Length Polymorphism Analysis</topic><topic>Animal Genetics and Genomics</topic><topic>Biomedical and Life Sciences</topic><topic>China</topic><topic>Conservation</topic><topic>Conservation of Natural Resources</topic><topic>Economic importance</topic><topic>Economics</topic><topic>Evolutionary Biology</topic><topic>Gene Flow</topic><topic>Genetic diversity</topic><topic>Genetic structure</topic><topic>Genetic Variation</topic><topic>Genetics, Population</topic><topic>Genome, Plant</topic><topic>Human Genetics</topic><topic>isolation</topic><topic>Kmeria septentrionalis</topic><topic>Life Sciences</topic><topic>Magnoliaceae - genetics</topic><topic>Microbial Genetics and Genomics</topic><topic>Natural populations</topic><topic>Original Research</topic><topic>Plant Genetics and Genomics</topic><topic>Pollen</topic><topic>Sample Size</topic><topic>Seed Dispersal</topic><topic>Spatial autocorrelation analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhao, Jian-Li</creatorcontrib><creatorcontrib>He, Tianhua</creatorcontrib><creatorcontrib>Li, Qiao-Ming</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Hospital Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection (subscription)</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biological Sciences</collection><collection>Health & Medical Collection (Alumni)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest Central (New)</collection><collection>ProQuest One Academic (New)</collection><collection>ProQuest Health & Medical Research Collection</collection><collection>ProQuest One Academic Middle East (New)</collection><collection>ProQuest One Health & Nursing</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Applied & Life Sciences</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Genetica</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhao, Jian-Li</au><au>He, Tianhua</au><au>Li, Qiao-Ming</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Contrasting coarse and fine scale genetic structure among isolated relic populations of Kmeria septentrionalis</atitle><jtitle>Genetica</jtitle><stitle>Genetica</stitle><addtitle>Genetica</addtitle><date>2010-10-01</date><risdate>2010</risdate><volume>138</volume><issue>9-10</issue><spage>939</spage><epage>944</epage><pages>939-944</pages><issn>0016-6707</issn><eissn>1573-6857</eissn><abstract>Trees of the Magnoliaceae family are of scientific, cultural and socio-economic importance. Kmeria septentrionalis Dandy (Magnoliaceae) is a dioecious tree, found in small, isolated, relic populations in Southern China, and is subject to extensive protection due to its rarity and high economic values. To improve conservation outcomes and in particular, germplasm collection guidelines, information on spatial genetic structure of the species is required. In this study, we investigated the spatial genetic structure and genetic diversity of 161 individuals of K. septentrionalis collected from five natural populations using AFLP molecular markers. Within-population genetic variation was measured, with percentage of polymorphic bands (PPB) ranged from 63% to 87%, while H S (genetic diversity within population) varied from 0.185 to 0.244 with a mean of 0.215 ± 0.025. Significant genetic differentiations were revealed between pairwise populations, indicating each population existing as an independent evolutionarily significant unit. Mantel test results showed no pattern of isolation-by-distance among populations separated by large distance. Fine scale spatial patterns of genetic variation suggested significant effects of isolation-by-distance within population at distances of 22 m. The results of contrasting genetic structure at coarse and fine scale in K. septentrionalis may indicate restricted pollen flow and seed dispersal at fine scales, and separated evolution in isolated populations over long period of time at coarser scales. Finally, we make several suggestions for improved management practices that may assist in the conservation of this species.</abstract><cop>Dordrecht</cop><pub>Dordrecht : Springer Netherlands</pub><pmid>20661630</pmid><doi>10.1007/s10709-010-9475-7</doi><tpages>6</tpages></addata></record> |
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subjects | AFLP Amplified Fragment Length Polymorphism Analysis Animal Genetics and Genomics Biomedical and Life Sciences China Conservation Conservation of Natural Resources Economic importance Economics Evolutionary Biology Gene Flow Genetic diversity Genetic structure Genetic Variation Genetics, Population Genome, Plant Human Genetics isolation Kmeria septentrionalis Life Sciences Magnoliaceae - genetics Microbial Genetics and Genomics Natural populations Original Research Plant Genetics and Genomics Pollen Sample Size Seed Dispersal Spatial autocorrelation analysis |
title | Contrasting coarse and fine scale genetic structure among isolated relic populations of Kmeria septentrionalis |
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