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Characterization of two novel filamentous phages of Xanthomonas
1 Department of Botany, 2 Institute of Molecular Biology and 3 Department of Horticulture, National Chung Hsing University, Taichung 402, Taiwan, Republic of China Two filamentous phages of Xanthomonas campestris pv. vesicatoria and Xanthomonas oryzae pv. oryzae were isolated and designated øXv and...
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Published in: | Journal of general virology 1994-09, Vol.75 (9), p.2543-2547 |
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creator | Lin, Nien-Tsung You, Bih-Yuh Huang, Chang-Yi Kuo, Chung-Wen Wen, Fu-Shyan Yang, Jui-Sen Tseng, Yi-Hsiung |
description | 1 Department of Botany,
2 Institute of Molecular Biology
and 3 Department of Horticulture, National Chung Hsing University, Taichung 402, Taiwan, Republic of China
Two filamentous phages of Xanthomonas campestris pv. vesicatoria and Xanthomonas oryzae pv. oryzae were isolated and designated øXv and øXo, respectively. They were similar to other filamentous phages of Xanthomonas in (i) shape, (ii) restrictive host specificity, (iii) high stability, (iv) an ssDNA genome, (v) a dsDNA as the replicative form (RF), (vi) propagation without lysis of host cells and (vii) ability to integrate into the host chromosome. These phages showed sequence homology to filamentous phage øLf of X. c. pv. campestris . øXv was inactivated by antisera against øXv, øXo and øLf, whereas øXo and øLf were inactivated only by their respective antisera and the anti-øXv serum. Both the single-stranded phage DNAs and the RF DNAs of øXv, øXo and øLf were able to transfect X. c. pv. vesicatoria, X. o. pv. oryzae and X. c. pv. campestris . Physical maps of øXv and øXo were constructed for the RF DNAs. Genome sizes were estimated, based on mapping data, to be 6.8 kb for øXv and 7.6 kb for øXo, larger than that of the øLf genome (6.0 kb). The difference in genome sizes appeared to result from insertions of large DNA fragments. These fragments and the regions mediating integration were localized in the physical maps.
Present address: Pesticide Toxicology Department, Taiwan Agricultural Chemicals and Toxic Substances Research Institute, Wufeng, Taichung 413, Taiwan, Republic of China.
Received 29 November 1993;
accepted 11 April 1994. |
doi_str_mv | 10.1099/0022-1317-75-9-2543 |
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2 Institute of Molecular Biology
and 3 Department of Horticulture, National Chung Hsing University, Taichung 402, Taiwan, Republic of China
Two filamentous phages of Xanthomonas campestris pv. vesicatoria and Xanthomonas oryzae pv. oryzae were isolated and designated øXv and øXo, respectively. They were similar to other filamentous phages of Xanthomonas in (i) shape, (ii) restrictive host specificity, (iii) high stability, (iv) an ssDNA genome, (v) a dsDNA as the replicative form (RF), (vi) propagation without lysis of host cells and (vii) ability to integrate into the host chromosome. These phages showed sequence homology to filamentous phage øLf of X. c. pv. campestris . øXv was inactivated by antisera against øXv, øXo and øLf, whereas øXo and øLf were inactivated only by their respective antisera and the anti-øXv serum. Both the single-stranded phage DNAs and the RF DNAs of øXv, øXo and øLf were able to transfect X. c. pv. vesicatoria, X. o. pv. oryzae and X. c. pv. campestris . Physical maps of øXv and øXo were constructed for the RF DNAs. Genome sizes were estimated, based on mapping data, to be 6.8 kb for øXv and 7.6 kb for øXo, larger than that of the øLf genome (6.0 kb). The difference in genome sizes appeared to result from insertions of large DNA fragments. These fragments and the regions mediating integration were localized in the physical maps.
Present address: Pesticide Toxicology Department, Taiwan Agricultural Chemicals and Toxic Substances Research Institute, Wufeng, Taichung 413, Taiwan, Republic of China.
Received 29 November 1993;
accepted 11 April 1994.</description><identifier>ISSN: 0022-1317</identifier><identifier>EISSN: 1465-2099</identifier><identifier>DOI: 10.1099/0022-1317-75-9-2543</identifier><identifier>PMID: 8077961</identifier><identifier>CODEN: JGVIAY</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Bacteriophages - isolation & purification ; Bacteriophages - physiology ; Bacteriophages - ultrastructure ; Biological and medical sciences ; DNA, Viral - analysis ; DNA, Viral - metabolism ; Fundamental and applied biological sciences. Psychology ; Immune Sera ; Microbiology ; Microscopy, Electron ; Open Reading Frames ; Restriction Mapping ; Sequence Homology, Nucleic Acid ; Systematics ; Virology ; Virus Replication ; Xanthomonas ; Xanthomonas campestris ; Xanthomonas campestris vesicatoria</subject><ispartof>Journal of general virology, 1994-09, Vol.75 (9), p.2543-2547</ispartof><rights>1994 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3533-9bbcb74158032e0a73e251f4200043e410295f9b0a753735d354f258292fa69a3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=4224803$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8077961$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lin, Nien-Tsung</creatorcontrib><creatorcontrib>You, Bih-Yuh</creatorcontrib><creatorcontrib>Huang, Chang-Yi</creatorcontrib><creatorcontrib>Kuo, Chung-Wen</creatorcontrib><creatorcontrib>Wen, Fu-Shyan</creatorcontrib><creatorcontrib>Yang, Jui-Sen</creatorcontrib><creatorcontrib>Tseng, Yi-Hsiung</creatorcontrib><title>Characterization of two novel filamentous phages of Xanthomonas</title><title>Journal of general virology</title><addtitle>J Gen Virol</addtitle><description>1 Department of Botany,
2 Institute of Molecular Biology
and 3 Department of Horticulture, National Chung Hsing University, Taichung 402, Taiwan, Republic of China
Two filamentous phages of Xanthomonas campestris pv. vesicatoria and Xanthomonas oryzae pv. oryzae were isolated and designated øXv and øXo, respectively. They were similar to other filamentous phages of Xanthomonas in (i) shape, (ii) restrictive host specificity, (iii) high stability, (iv) an ssDNA genome, (v) a dsDNA as the replicative form (RF), (vi) propagation without lysis of host cells and (vii) ability to integrate into the host chromosome. These phages showed sequence homology to filamentous phage øLf of X. c. pv. campestris . øXv was inactivated by antisera against øXv, øXo and øLf, whereas øXo and øLf were inactivated only by their respective antisera and the anti-øXv serum. Both the single-stranded phage DNAs and the RF DNAs of øXv, øXo and øLf were able to transfect X. c. pv. vesicatoria, X. o. pv. oryzae and X. c. pv. campestris . Physical maps of øXv and øXo were constructed for the RF DNAs. Genome sizes were estimated, based on mapping data, to be 6.8 kb for øXv and 7.6 kb for øXo, larger than that of the øLf genome (6.0 kb). The difference in genome sizes appeared to result from insertions of large DNA fragments. These fragments and the regions mediating integration were localized in the physical maps.
Present address: Pesticide Toxicology Department, Taiwan Agricultural Chemicals and Toxic Substances Research Institute, Wufeng, Taichung 413, Taiwan, Republic of China.
Received 29 November 1993;
accepted 11 April 1994.</description><subject>Bacteriophages - isolation & purification</subject><subject>Bacteriophages - physiology</subject><subject>Bacteriophages - ultrastructure</subject><subject>Biological and medical sciences</subject><subject>DNA, Viral - analysis</subject><subject>DNA, Viral - metabolism</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Immune Sera</subject><subject>Microbiology</subject><subject>Microscopy, Electron</subject><subject>Open Reading Frames</subject><subject>Restriction Mapping</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>Systematics</subject><subject>Virology</subject><subject>Virus Replication</subject><subject>Xanthomonas</subject><subject>Xanthomonas campestris</subject><subject>Xanthomonas campestris vesicatoria</subject><issn>0022-1317</issn><issn>1465-2099</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1994</creationdate><recordtype>article</recordtype><recordid>eNqFkE1LwzAYgIMoc05_gQg9iHiJ5rNpTiLDLxh4UfAW0i5ZI20zk25Df70pG_PoKYfned-8PACcY3SDkZS3CBECMcUCCg4lJJzRAzDGLOeQJH4IxnvjGJzE-IkQZoyLERgVSAiZ4zG4m9Y66Ko3wf3o3vku8zbrNz7r_No0mXWNbk3X-1XMlrVemDjwD931tW99p-MpOLK6ieZs907A--PD2_QZzl6fXqb3M1hRTimUZVmVgmFeIEoM0oIawrFlBCHEqGEYEcmtLBPhVFA-p5xZwgsiidW51HQCrrZ7l8F_rUzsVetiZZpGdyYdp0SeF5jS_F8R51zKvBhEuhWr4GMMxqplcK0O3wojNfRVQz011FOCK6mGvmnqYrd-VbZmvp_ZBU38csd1rHRjg-4qF_caI4SlBEm73mq1W9QbF4xamK516ZTSebV24e_HXzWqjow</recordid><startdate>199409</startdate><enddate>199409</enddate><creator>Lin, Nien-Tsung</creator><creator>You, Bih-Yuh</creator><creator>Huang, Chang-Yi</creator><creator>Kuo, Chung-Wen</creator><creator>Wen, Fu-Shyan</creator><creator>Yang, Jui-Sen</creator><creator>Tseng, Yi-Hsiung</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7U9</scope><scope>C1K</scope><scope>H94</scope><scope>7X8</scope></search><sort><creationdate>199409</creationdate><title>Characterization of two novel filamentous phages of Xanthomonas</title><author>Lin, Nien-Tsung ; You, Bih-Yuh ; Huang, Chang-Yi ; Kuo, Chung-Wen ; Wen, Fu-Shyan ; Yang, Jui-Sen ; Tseng, Yi-Hsiung</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3533-9bbcb74158032e0a73e251f4200043e410295f9b0a753735d354f258292fa69a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1994</creationdate><topic>Bacteriophages - isolation & purification</topic><topic>Bacteriophages - physiology</topic><topic>Bacteriophages - ultrastructure</topic><topic>Biological and medical sciences</topic><topic>DNA, Viral - analysis</topic><topic>DNA, Viral - metabolism</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Immune Sera</topic><topic>Microbiology</topic><topic>Microscopy, Electron</topic><topic>Open Reading Frames</topic><topic>Restriction Mapping</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>Systematics</topic><topic>Virology</topic><topic>Virus Replication</topic><topic>Xanthomonas</topic><topic>Xanthomonas campestris</topic><topic>Xanthomonas campestris vesicatoria</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lin, Nien-Tsung</creatorcontrib><creatorcontrib>You, Bih-Yuh</creatorcontrib><creatorcontrib>Huang, Chang-Yi</creatorcontrib><creatorcontrib>Kuo, Chung-Wen</creatorcontrib><creatorcontrib>Wen, Fu-Shyan</creatorcontrib><creatorcontrib>Yang, Jui-Sen</creatorcontrib><creatorcontrib>Tseng, Yi-Hsiung</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of general virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lin, Nien-Tsung</au><au>You, Bih-Yuh</au><au>Huang, Chang-Yi</au><au>Kuo, Chung-Wen</au><au>Wen, Fu-Shyan</au><au>Yang, Jui-Sen</au><au>Tseng, Yi-Hsiung</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of two novel filamentous phages of Xanthomonas</atitle><jtitle>Journal of general virology</jtitle><addtitle>J Gen Virol</addtitle><date>1994-09</date><risdate>1994</risdate><volume>75</volume><issue>9</issue><spage>2543</spage><epage>2547</epage><pages>2543-2547</pages><issn>0022-1317</issn><eissn>1465-2099</eissn><coden>JGVIAY</coden><abstract>1 Department of Botany,
2 Institute of Molecular Biology
and 3 Department of Horticulture, National Chung Hsing University, Taichung 402, Taiwan, Republic of China
Two filamentous phages of Xanthomonas campestris pv. vesicatoria and Xanthomonas oryzae pv. oryzae were isolated and designated øXv and øXo, respectively. They were similar to other filamentous phages of Xanthomonas in (i) shape, (ii) restrictive host specificity, (iii) high stability, (iv) an ssDNA genome, (v) a dsDNA as the replicative form (RF), (vi) propagation without lysis of host cells and (vii) ability to integrate into the host chromosome. These phages showed sequence homology to filamentous phage øLf of X. c. pv. campestris . øXv was inactivated by antisera against øXv, øXo and øLf, whereas øXo and øLf were inactivated only by their respective antisera and the anti-øXv serum. Both the single-stranded phage DNAs and the RF DNAs of øXv, øXo and øLf were able to transfect X. c. pv. vesicatoria, X. o. pv. oryzae and X. c. pv. campestris . Physical maps of øXv and øXo were constructed for the RF DNAs. Genome sizes were estimated, based on mapping data, to be 6.8 kb for øXv and 7.6 kb for øXo, larger than that of the øLf genome (6.0 kb). The difference in genome sizes appeared to result from insertions of large DNA fragments. These fragments and the regions mediating integration were localized in the physical maps.
Present address: Pesticide Toxicology Department, Taiwan Agricultural Chemicals and Toxic Substances Research Institute, Wufeng, Taichung 413, Taiwan, Republic of China.
Received 29 November 1993;
accepted 11 April 1994.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>8077961</pmid><doi>10.1099/0022-1317-75-9-2543</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Bacteriophages - isolation & purification Bacteriophages - physiology Bacteriophages - ultrastructure Biological and medical sciences DNA, Viral - analysis DNA, Viral - metabolism Fundamental and applied biological sciences. Psychology Immune Sera Microbiology Microscopy, Electron Open Reading Frames Restriction Mapping Sequence Homology, Nucleic Acid Systematics Virology Virus Replication Xanthomonas Xanthomonas campestris Xanthomonas campestris vesicatoria |
title | Characterization of two novel filamentous phages of Xanthomonas |
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