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Structural Constraints on the Ternary Complex of 5-Enolpyruvylshikimate-3-phosphate Synthase from Rotational-echo Double-resonance NMR
The 46 kDa enzyme 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase catalyzes the condensation of shikimate-3-phosphate (S3P) and phospho enolpyruvate to form EPSP. The reaction is inhibited by N-(phosphono- methyl)-glycine (Glp), which, in the presence of S3P, binds to EPSP synthase to form a stab...
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Published in: | Journal of molecular biology 1996-02, Vol.256 (1), p.160-171 |
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creator | McDowell, Lynda M. Schmidt, Asher Cohen, Eric R. Studelska, Daniel R. Schaefer, Jacob |
description | The 46 kDa enzyme 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase catalyzes the condensation of shikimate-3-phosphate (S3P) and phospho enolpyruvate to form EPSP. The reaction is inhibited by
N-(phosphono- methyl)-glycine (Glp), which, in the presence of S3P, binds to EPSP synthase to form a stable ternary complex. As part of a solid-state NMR characterization of this structure,
15N labels were introduced selectively into the lysine, arginine and histidine residues of EPSP synthase and distances to a
13C label in Glp and to the
31P in S3P and Glp were measured by rotational-echo double-resonance NMR. Three lysine and four arginine residues are in the proximity of the phosphate group of S3P and the carboxyl and phosphonate groups of Glp. A single histidine residue is in the vicinity of the binding site (closer to Glp than to S3P) but is more distant than the lysine and arginine residues. |
doi_str_mv | 10.1006/jmbi.1996.0074 |
format | article |
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N-(phosphono- methyl)-glycine (Glp), which, in the presence of S3P, binds to EPSP synthase to form a stable ternary complex. As part of a solid-state NMR characterization of this structure,
15N labels were introduced selectively into the lysine, arginine and histidine residues of EPSP synthase and distances to a
13C label in Glp and to the
31P in S3P and Glp were measured by rotational-echo double-resonance NMR. Three lysine and four arginine residues are in the proximity of the phosphate group of S3P and the carboxyl and phosphonate groups of Glp. A single histidine residue is in the vicinity of the binding site (closer to Glp than to S3P) but is more distant than the lysine and arginine residues.</description><identifier>ISSN: 0022-2836</identifier><identifier>EISSN: 1089-8638</identifier><identifier>DOI: 10.1006/jmbi.1996.0074</identifier><identifier>PMID: 8609607</identifier><language>eng</language><publisher>Netherlands: Elsevier Ltd</publisher><subject>3-Phosphoshikimate 1-Carboxyvinyltransferase ; 5-enolpyruvylshikimate-3-phosphate synthase ; Alkyl and Aryl Transferases ; Arginine - chemistry ; Binding Sites ; Escherichia coli - enzymology ; Glycine - analogs & derivatives ; Glycine - metabolism ; Glyphosate ; Histidine - chemistry ; interatomic distances ; Lysine - chemistry ; Magnetic Resonance Spectroscopy - methods ; Molecular Structure ; Nitrogen Isotopes ; protein binding site ; Shikimic Acid - analogs & derivatives ; Shikimic Acid - metabolism ; solid-state NMR ; stable-isotope label ; Transferases - antagonists & inhibitors ; Transferases - chemistry ; Transferases - metabolism</subject><ispartof>Journal of molecular biology, 1996-02, Vol.256 (1), p.160-171</ispartof><rights>1996 Academic Press</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c405t-adcacca345afc8f19ec5547639bca6017d4f8cc4814b8966f40081a7238cf7523</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8609607$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>McDowell, Lynda M.</creatorcontrib><creatorcontrib>Schmidt, Asher</creatorcontrib><creatorcontrib>Cohen, Eric R.</creatorcontrib><creatorcontrib>Studelska, Daniel R.</creatorcontrib><creatorcontrib>Schaefer, Jacob</creatorcontrib><title>Structural Constraints on the Ternary Complex of 5-Enolpyruvylshikimate-3-phosphate Synthase from Rotational-echo Double-resonance NMR</title><title>Journal of molecular biology</title><addtitle>J Mol Biol</addtitle><description>The 46 kDa enzyme 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase catalyzes the condensation of shikimate-3-phosphate (S3P) and phospho enolpyruvate to form EPSP. The reaction is inhibited by
N-(phosphono- methyl)-glycine (Glp), which, in the presence of S3P, binds to EPSP synthase to form a stable ternary complex. As part of a solid-state NMR characterization of this structure,
15N labels were introduced selectively into the lysine, arginine and histidine residues of EPSP synthase and distances to a
13C label in Glp and to the
31P in S3P and Glp were measured by rotational-echo double-resonance NMR. Three lysine and four arginine residues are in the proximity of the phosphate group of S3P and the carboxyl and phosphonate groups of Glp. A single histidine residue is in the vicinity of the binding site (closer to Glp than to S3P) but is more distant than the lysine and arginine residues.</description><subject>3-Phosphoshikimate 1-Carboxyvinyltransferase</subject><subject>5-enolpyruvylshikimate-3-phosphate synthase</subject><subject>Alkyl and Aryl Transferases</subject><subject>Arginine - chemistry</subject><subject>Binding Sites</subject><subject>Escherichia coli - enzymology</subject><subject>Glycine - analogs & derivatives</subject><subject>Glycine - metabolism</subject><subject>Glyphosate</subject><subject>Histidine - chemistry</subject><subject>interatomic distances</subject><subject>Lysine - chemistry</subject><subject>Magnetic Resonance Spectroscopy - methods</subject><subject>Molecular Structure</subject><subject>Nitrogen Isotopes</subject><subject>protein binding site</subject><subject>Shikimic Acid - analogs & derivatives</subject><subject>Shikimic Acid - metabolism</subject><subject>solid-state NMR</subject><subject>stable-isotope label</subject><subject>Transferases - antagonists & inhibitors</subject><subject>Transferases - chemistry</subject><subject>Transferases - metabolism</subject><issn>0022-2836</issn><issn>1089-8638</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1996</creationdate><recordtype>article</recordtype><recordid>eNp1kEFv1DAQhS0EKtvClRuST9y82InjOEe0FIpUQGrL2XKcseKS2MF2KvIH-N14tStunGY0782T3ofQG0b3jFLx_nHu3Z51ndhT2vJnaMeo7IgUtXyOdpRWFalkLV6iy5QeKaVNzeUFupCCdoK2O_TnPsfV5DXqCR-CTzlq53PCweM8An6A6HXcijQvE_zGweKGXPswLVtcn7Ypje6nm3UGUpNlDGkZy47vN59HnQDbGGZ8F7LOLng9ETBjwB_D2k9AIqRy8wbwt693r9ALq6cEr8_zCv34dP1wuCG33z9_OXy4JYbTJhM9GG2MrnmjrZGWdWCahrei7nqjBWXtwK00hkvGe9kJYTmlkum2qqWxbVPVV-jdKXeJ4dcKKavZJQPTpD2ENam27WQlK16M-5PRxJBSBKuWWIrGTTGqjuDVEbw6gldH8OXh7Tl57WcY_tnPpIsuTzqUek8OokrGQak_uAgmqyG4_0X_BelclR4</recordid><startdate>19960216</startdate><enddate>19960216</enddate><creator>McDowell, Lynda M.</creator><creator>Schmidt, Asher</creator><creator>Cohen, Eric R.</creator><creator>Studelska, Daniel R.</creator><creator>Schaefer, Jacob</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>19960216</creationdate><title>Structural Constraints on the Ternary Complex of 5-Enolpyruvylshikimate-3-phosphate Synthase from Rotational-echo Double-resonance NMR</title><author>McDowell, Lynda M. ; Schmidt, Asher ; Cohen, Eric R. ; Studelska, Daniel R. ; Schaefer, Jacob</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c405t-adcacca345afc8f19ec5547639bca6017d4f8cc4814b8966f40081a7238cf7523</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1996</creationdate><topic>3-Phosphoshikimate 1-Carboxyvinyltransferase</topic><topic>5-enolpyruvylshikimate-3-phosphate synthase</topic><topic>Alkyl and Aryl Transferases</topic><topic>Arginine - chemistry</topic><topic>Binding Sites</topic><topic>Escherichia coli - enzymology</topic><topic>Glycine - analogs & derivatives</topic><topic>Glycine - metabolism</topic><topic>Glyphosate</topic><topic>Histidine - chemistry</topic><topic>interatomic distances</topic><topic>Lysine - chemistry</topic><topic>Magnetic Resonance Spectroscopy - methods</topic><topic>Molecular Structure</topic><topic>Nitrogen Isotopes</topic><topic>protein binding site</topic><topic>Shikimic Acid - analogs & derivatives</topic><topic>Shikimic Acid - metabolism</topic><topic>solid-state NMR</topic><topic>stable-isotope label</topic><topic>Transferases - antagonists & inhibitors</topic><topic>Transferases - chemistry</topic><topic>Transferases - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>McDowell, Lynda M.</creatorcontrib><creatorcontrib>Schmidt, Asher</creatorcontrib><creatorcontrib>Cohen, Eric R.</creatorcontrib><creatorcontrib>Studelska, Daniel R.</creatorcontrib><creatorcontrib>Schaefer, Jacob</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>McDowell, Lynda M.</au><au>Schmidt, Asher</au><au>Cohen, Eric R.</au><au>Studelska, Daniel R.</au><au>Schaefer, Jacob</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structural Constraints on the Ternary Complex of 5-Enolpyruvylshikimate-3-phosphate Synthase from Rotational-echo Double-resonance NMR</atitle><jtitle>Journal of molecular biology</jtitle><addtitle>J Mol Biol</addtitle><date>1996-02-16</date><risdate>1996</risdate><volume>256</volume><issue>1</issue><spage>160</spage><epage>171</epage><pages>160-171</pages><issn>0022-2836</issn><eissn>1089-8638</eissn><abstract>The 46 kDa enzyme 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase catalyzes the condensation of shikimate-3-phosphate (S3P) and phospho enolpyruvate to form EPSP. The reaction is inhibited by
N-(phosphono- methyl)-glycine (Glp), which, in the presence of S3P, binds to EPSP synthase to form a stable ternary complex. As part of a solid-state NMR characterization of this structure,
15N labels were introduced selectively into the lysine, arginine and histidine residues of EPSP synthase and distances to a
13C label in Glp and to the
31P in S3P and Glp were measured by rotational-echo double-resonance NMR. Three lysine and four arginine residues are in the proximity of the phosphate group of S3P and the carboxyl and phosphonate groups of Glp. A single histidine residue is in the vicinity of the binding site (closer to Glp than to S3P) but is more distant than the lysine and arginine residues.</abstract><cop>Netherlands</cop><pub>Elsevier Ltd</pub><pmid>8609607</pmid><doi>10.1006/jmbi.1996.0074</doi><tpages>12</tpages></addata></record> |
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subjects | 3-Phosphoshikimate 1-Carboxyvinyltransferase 5-enolpyruvylshikimate-3-phosphate synthase Alkyl and Aryl Transferases Arginine - chemistry Binding Sites Escherichia coli - enzymology Glycine - analogs & derivatives Glycine - metabolism Glyphosate Histidine - chemistry interatomic distances Lysine - chemistry Magnetic Resonance Spectroscopy - methods Molecular Structure Nitrogen Isotopes protein binding site Shikimic Acid - analogs & derivatives Shikimic Acid - metabolism solid-state NMR stable-isotope label Transferases - antagonists & inhibitors Transferases - chemistry Transferases - metabolism |
title | Structural Constraints on the Ternary Complex of 5-Enolpyruvylshikimate-3-phosphate Synthase from Rotational-echo Double-resonance NMR |
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