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Relationships between polymorphism for mitochondrial deoxyribonucleic acid and yield traits of Holstein cows
Two independent data files from the breeding herd of Iowa State University and six North Carolina herds were used to examine relationships between yield traits and mtDNA polymorphism. Maternal lineages were established by tracing ancestry of cows to founder females in the herd book of the Holstein A...
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Published in: | Journal of dairy science 1996-04, Vol.79 (4), p.647-654 |
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creator | Boettcher, P. J Freeman, A. E Johnston, S. D Smith, R. K Beitz, D. C Mcdaniel, B. T |
description | Two independent data files from the breeding herd of Iowa State University and six North Carolina herds were used to examine relationships between yield traits and mtDNA polymorphism. Maternal lineages were established by tracing ancestry of cows to founder females in the herd book of the Holstein Association. Data from Iowa State University were 1476 records from 602 cows from 29 maternal lineages. The nucleotides of mtDNA encoding rRNA were sequenced. Eleven sites of polymorphism were found. An animal model for gene substitution was used to examine the relationship between sequence differences and yield traits. Traits analyzed were mature equivalent yield of milk, fat, SNF, and milk energy as well as concentrations of fat, SNF, and milk energy. Effects of sequence differences were significant for most traits. Sequence information from the D-loop was available for 12 lineages from North Carolina. The effect of polymorphism at 4 sites was examined using 1472 records from 668 cows. Traits measured were the same, except that protein replaced SNF. No significant relationships existed between any of the traits and D-loop polymorphism, but results suggested that an association might exist between polymorphism and concentrations of milk yield, fat percentage, and energy. Whenever a significant relationship was detected, the effect of mutation (rare genotype) was detrimental. |
doi_str_mv | 10.3168/jds.S0022-0302(96)76410-X |
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J ; Freeman, A. E ; Johnston, S. D ; Smith, R. K ; Beitz, D. C ; Mcdaniel, B. T</creator><creatorcontrib>Boettcher, P. J ; Freeman, A. E ; Johnston, S. D ; Smith, R. K ; Beitz, D. C ; Mcdaniel, B. T ; Landbouweekblad, Cape Town (South Africa) ; Iowa State University, Ames</creatorcontrib><description>Two independent data files from the breeding herd of Iowa State University and six North Carolina herds were used to examine relationships between yield traits and mtDNA polymorphism. Maternal lineages were established by tracing ancestry of cows to founder females in the herd book of the Holstein Association. Data from Iowa State University were 1476 records from 602 cows from 29 maternal lineages. The nucleotides of mtDNA encoding rRNA were sequenced. Eleven sites of polymorphism were found. An animal model for gene substitution was used to examine the relationship between sequence differences and yield traits. Traits analyzed were mature equivalent yield of milk, fat, SNF, and milk energy as well as concentrations of fat, SNF, and milk energy. Effects of sequence differences were significant for most traits. Sequence information from the D-loop was available for 12 lineages from North Carolina. The effect of polymorphism at 4 sites was examined using 1472 records from 668 cows. Traits measured were the same, except that protein replaced SNF. No significant relationships existed between any of the traits and D-loop polymorphism, but results suggested that an association might exist between polymorphism and concentrations of milk yield, fat percentage, and energy. Whenever a significant relationship was detected, the effect of mutation (rare genotype) was detrimental.</description><identifier>ISSN: 0022-0302</identifier><identifier>EISSN: 1525-3198</identifier><identifier>DOI: 10.3168/jds.S0022-0302(96)76410-X</identifier><identifier>PMID: 8744230</identifier><identifier>CODEN: JDSCAE</identifier><language>eng</language><publisher>Savoy, IL: Am Dairy Sci Assoc</publisher><subject>adn ; Animal productions ; Animals ; arn ribosomal ; arn ribosomial ; Biological and medical sciences ; breeds animals ; carolina del norte ; caroline du nord ; Cattle - genetics ; composicion aproximada ; composition globale ; contenido de lipidos ; dairy cows ; dna ; DNA, Mitochondrial - genetics ; energy value ; Female ; Fundamental and applied biological sciences. Psychology ; genetic polymorphism ; genotipos ; Genotype ; genotypes ; grasa de la leche ; iowa ; Lactation - genetics ; lipid content ; Lipids - analysis ; mathematical models ; matiere grasse du lait ; Milk - chemistry ; milk fat ; milk yield ; mitochondria ; mitochondrie ; mitocondria ; modele mathematique ; modelos matematicos ; Mutation ; north carolina ; nucleotide sequence ; polimorfismo genetico ; Polymorphism, Genetic ; polymorphisme genetique ; proximate composition ; race animal ; razas animales ; rendement laitier ; rendimiento lechero ; ribosomal rna ; RNA, Ribosomal - genetics ; secuencia nucleotidica ; sequence nucleotidique ; teneur en lipides ; Terrestrial animal productions ; vacas lecheras ; vache laitiere ; valeur energetique ; valor energetico ; Vertebrates</subject><ispartof>Journal of dairy science, 1996-04, Vol.79 (4), p.647-654</ispartof><rights>1996 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c473t-ae1510c1d40dabb0ad8688f859d4d0f823f9f783409eca7cb3b405ee830c0c173</citedby><cites>FETCH-LOGICAL-c473t-ae1510c1d40dabb0ad8688f859d4d0f823f9f783409eca7cb3b405ee830c0c173</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=3089407$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8744230$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Boettcher, P. J</creatorcontrib><creatorcontrib>Freeman, A. E</creatorcontrib><creatorcontrib>Johnston, S. D</creatorcontrib><creatorcontrib>Smith, R. K</creatorcontrib><creatorcontrib>Beitz, D. C</creatorcontrib><creatorcontrib>Mcdaniel, B. T</creatorcontrib><creatorcontrib>Landbouweekblad, Cape Town (South Africa)</creatorcontrib><creatorcontrib>Iowa State University, Ames</creatorcontrib><title>Relationships between polymorphism for mitochondrial deoxyribonucleic acid and yield traits of Holstein cows</title><title>Journal of dairy science</title><addtitle>J Dairy Sci</addtitle><description>Two independent data files from the breeding herd of Iowa State University and six North Carolina herds were used to examine relationships between yield traits and mtDNA polymorphism. Maternal lineages were established by tracing ancestry of cows to founder females in the herd book of the Holstein Association. Data from Iowa State University were 1476 records from 602 cows from 29 maternal lineages. The nucleotides of mtDNA encoding rRNA were sequenced. Eleven sites of polymorphism were found. An animal model for gene substitution was used to examine the relationship between sequence differences and yield traits. Traits analyzed were mature equivalent yield of milk, fat, SNF, and milk energy as well as concentrations of fat, SNF, and milk energy. Effects of sequence differences were significant for most traits. Sequence information from the D-loop was available for 12 lineages from North Carolina. The effect of polymorphism at 4 sites was examined using 1472 records from 668 cows. Traits measured were the same, except that protein replaced SNF. No significant relationships existed between any of the traits and D-loop polymorphism, but results suggested that an association might exist between polymorphism and concentrations of milk yield, fat percentage, and energy. Whenever a significant relationship was detected, the effect of mutation (rare genotype) was detrimental.</description><subject>adn</subject><subject>Animal productions</subject><subject>Animals</subject><subject>arn ribosomal</subject><subject>arn ribosomial</subject><subject>Biological and medical sciences</subject><subject>breeds animals</subject><subject>carolina del norte</subject><subject>caroline du nord</subject><subject>Cattle - genetics</subject><subject>composicion aproximada</subject><subject>composition globale</subject><subject>contenido de lipidos</subject><subject>dairy cows</subject><subject>dna</subject><subject>DNA, Mitochondrial - genetics</subject><subject>energy value</subject><subject>Female</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genetic polymorphism</subject><subject>genotipos</subject><subject>Genotype</subject><subject>genotypes</subject><subject>grasa de la leche</subject><subject>iowa</subject><subject>Lactation - genetics</subject><subject>lipid content</subject><subject>Lipids - analysis</subject><subject>mathematical models</subject><subject>matiere grasse du lait</subject><subject>Milk - chemistry</subject><subject>milk fat</subject><subject>milk yield</subject><subject>mitochondria</subject><subject>mitochondrie</subject><subject>mitocondria</subject><subject>modele mathematique</subject><subject>modelos matematicos</subject><subject>Mutation</subject><subject>north carolina</subject><subject>nucleotide sequence</subject><subject>polimorfismo genetico</subject><subject>Polymorphism, Genetic</subject><subject>polymorphisme genetique</subject><subject>proximate composition</subject><subject>race animal</subject><subject>razas animales</subject><subject>rendement laitier</subject><subject>rendimiento lechero</subject><subject>ribosomal rna</subject><subject>RNA, Ribosomal - genetics</subject><subject>secuencia nucleotidica</subject><subject>sequence nucleotidique</subject><subject>teneur en lipides</subject><subject>Terrestrial animal productions</subject><subject>vacas lecheras</subject><subject>vache laitiere</subject><subject>valeur energetique</subject><subject>valor energetico</subject><subject>Vertebrates</subject><issn>0022-0302</issn><issn>1525-3198</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1996</creationdate><recordtype>article</recordtype><recordid>eNpdkVtv1DAQhS0EKkvhJ4CMuAgeUuzYie1HVAFFqoREqdQ3y_Gl8cqJUzvRsv8ep7vaB55Go_nOmbEPAG8xuiC45V-2Jl_cIFTXFSKo_iTaz6ylGFV3T8AGN3VTESz4U7A5Ic_Bi5y3pcU1as7AGWeU1gRtQPhtg5p9HHPvpww7O--sHeEUw36Iaep9HqCLCQ5-jrqPo0leBWhs_LtPvovjooP1GirtDVSjgXtvg4FzUn7OMDp4FUOerR-hjrv8EjxzKmT76ljPwe33b38ur6rrXz9-Xn69rjRlZK6UxQ1GGhuKjOo6pAxvOXe8EYYa5HhNnHCME4qE1YrpjnQUNdZygnSRMXIOPh58pxQfFptnOfisbQhqtHHJkvGaEkRFAd_9B27jksZym8ScMSTapiGFEgdKp5hzsk5OyQ8q7SVGcs1DljzkYx5y_WwpWvmYh7wr2tfHDUs3WHNSHgMo8_fHucpaBZfUqH0-YQRxQdH6og8HrPf3_c4nK_OgQiimeF3OhKSypSv35sA5FaW6T8Xq9gYLwdbjWtySf7q0rFQ</recordid><startdate>19960401</startdate><enddate>19960401</enddate><creator>Boettcher, P. 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T</creator><general>Am Dairy Sci Assoc</general><general>American Dairy Science Association</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7WH</scope><scope>K30</scope><scope>PAAUG</scope><scope>PAWHS</scope><scope>PAWZZ</scope><scope>PAXOH</scope><scope>PBHAV</scope><scope>PBQSW</scope><scope>PBYQZ</scope><scope>PCIWU</scope><scope>PCMID</scope><scope>PCZJX</scope><scope>PDGRG</scope><scope>PDWWI</scope><scope>PETMR</scope><scope>PFVGT</scope><scope>PGXDX</scope><scope>PIHIL</scope><scope>PISVA</scope><scope>PJCTQ</scope><scope>PJTMS</scope><scope>PLCHJ</scope><scope>PMHAD</scope><scope>PNQDJ</scope><scope>POUND</scope><scope>PPLAD</scope><scope>PQAPC</scope><scope>PQCAN</scope><scope>PQCMW</scope><scope>PQEME</scope><scope>PQHKH</scope><scope>PQMID</scope><scope>PQNCT</scope><scope>PQNET</scope><scope>PQSCT</scope><scope>PQSET</scope><scope>PSVJG</scope><scope>PVMQY</scope><scope>PZGFC</scope><scope>7X8</scope></search><sort><creationdate>19960401</creationdate><title>Relationships between polymorphism for mitochondrial deoxyribonucleic acid and yield traits of Holstein cows</title><author>Boettcher, P. J ; Freeman, A. E ; Johnston, S. D ; Smith, R. K ; Beitz, D. C ; Mcdaniel, B. T</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c473t-ae1510c1d40dabb0ad8688f859d4d0f823f9f783409eca7cb3b405ee830c0c173</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1996</creationdate><topic>adn</topic><topic>Animal productions</topic><topic>Animals</topic><topic>arn ribosomal</topic><topic>arn ribosomial</topic><topic>Biological and medical sciences</topic><topic>breeds animals</topic><topic>carolina del norte</topic><topic>caroline du nord</topic><topic>Cattle - genetics</topic><topic>composicion aproximada</topic><topic>composition globale</topic><topic>contenido de lipidos</topic><topic>dairy cows</topic><topic>dna</topic><topic>DNA, Mitochondrial - genetics</topic><topic>energy value</topic><topic>Female</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>genetic polymorphism</topic><topic>genotipos</topic><topic>Genotype</topic><topic>genotypes</topic><topic>grasa de la leche</topic><topic>iowa</topic><topic>Lactation - genetics</topic><topic>lipid content</topic><topic>Lipids - analysis</topic><topic>mathematical models</topic><topic>matiere grasse du lait</topic><topic>Milk - chemistry</topic><topic>milk fat</topic><topic>milk yield</topic><topic>mitochondria</topic><topic>mitochondrie</topic><topic>mitocondria</topic><topic>modele mathematique</topic><topic>modelos matematicos</topic><topic>Mutation</topic><topic>north carolina</topic><topic>nucleotide sequence</topic><topic>polimorfismo genetico</topic><topic>Polymorphism, Genetic</topic><topic>polymorphisme genetique</topic><topic>proximate composition</topic><topic>race animal</topic><topic>razas animales</topic><topic>rendement laitier</topic><topic>rendimiento lechero</topic><topic>ribosomal rna</topic><topic>RNA, Ribosomal - genetics</topic><topic>secuencia nucleotidica</topic><topic>sequence nucleotidique</topic><topic>teneur en lipides</topic><topic>Terrestrial animal productions</topic><topic>vacas lecheras</topic><topic>vache laitiere</topic><topic>valeur energetique</topic><topic>valor energetico</topic><topic>Vertebrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Boettcher, P. 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J</au><au>Freeman, A. E</au><au>Johnston, S. D</au><au>Smith, R. K</au><au>Beitz, D. C</au><au>Mcdaniel, B. T</au><aucorp>Landbouweekblad, Cape Town (South Africa)</aucorp><aucorp>Iowa State University, Ames</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Relationships between polymorphism for mitochondrial deoxyribonucleic acid and yield traits of Holstein cows</atitle><jtitle>Journal of dairy science</jtitle><addtitle>J Dairy Sci</addtitle><date>1996-04-01</date><risdate>1996</risdate><volume>79</volume><issue>4</issue><spage>647</spage><epage>654</epage><pages>647-654</pages><issn>0022-0302</issn><eissn>1525-3198</eissn><coden>JDSCAE</coden><abstract>Two independent data files from the breeding herd of Iowa State University and six North Carolina herds were used to examine relationships between yield traits and mtDNA polymorphism. Maternal lineages were established by tracing ancestry of cows to founder females in the herd book of the Holstein Association. Data from Iowa State University were 1476 records from 602 cows from 29 maternal lineages. The nucleotides of mtDNA encoding rRNA were sequenced. Eleven sites of polymorphism were found. An animal model for gene substitution was used to examine the relationship between sequence differences and yield traits. Traits analyzed were mature equivalent yield of milk, fat, SNF, and milk energy as well as concentrations of fat, SNF, and milk energy. Effects of sequence differences were significant for most traits. Sequence information from the D-loop was available for 12 lineages from North Carolina. The effect of polymorphism at 4 sites was examined using 1472 records from 668 cows. Traits measured were the same, except that protein replaced SNF. No significant relationships existed between any of the traits and D-loop polymorphism, but results suggested that an association might exist between polymorphism and concentrations of milk yield, fat percentage, and energy. Whenever a significant relationship was detected, the effect of mutation (rare genotype) was detrimental.</abstract><cop>Savoy, IL</cop><pub>Am Dairy Sci Assoc</pub><pmid>8744230</pmid><doi>10.3168/jds.S0022-0302(96)76410-X</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | adn Animal productions Animals arn ribosomal arn ribosomial Biological and medical sciences breeds animals carolina del norte caroline du nord Cattle - genetics composicion aproximada composition globale contenido de lipidos dairy cows dna DNA, Mitochondrial - genetics energy value Female Fundamental and applied biological sciences. Psychology genetic polymorphism genotipos Genotype genotypes grasa de la leche iowa Lactation - genetics lipid content Lipids - analysis mathematical models matiere grasse du lait Milk - chemistry milk fat milk yield mitochondria mitochondrie mitocondria modele mathematique modelos matematicos Mutation north carolina nucleotide sequence polimorfismo genetico Polymorphism, Genetic polymorphisme genetique proximate composition race animal razas animales rendement laitier rendimiento lechero ribosomal rna RNA, Ribosomal - genetics secuencia nucleotidica sequence nucleotidique teneur en lipides Terrestrial animal productions vacas lecheras vache laitiere valeur energetique valor energetico Vertebrates |
title | Relationships between polymorphism for mitochondrial deoxyribonucleic acid and yield traits of Holstein cows |
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