A simple method for detecting human polyomavirus DNA in urine by the polymerase chain reaction

• Published in: Journal of virological methods 1996-04, Vol.58 (1), p.131-136
• Main Authors: Chang, Deching, Wang, Meilin, Ou, Wei-chih, Tsai, Rong-tai, Fung, Chiung-yau, Hwang, yuh-jean
• Format: Article
• Language: English
• Subjects: Biological and medical sciences; Dialysis; DNA, Viral - urine; Female; Human viral diseases; Humans; Infectious diseases; Inhibitors; JC Virus - genetics; JC Virus - isolation & purification; JCV; Medical sciences; Polymerase Chain Reaction - methods; polyomavirus; Pregnancy; Sensitivity and Specificity; Viral diseases; Viral diseases of the genital and urinary system
• ISSN: 0166-0934; 1879-0984
• DOI: 10.1016/0166-0934(95)02001-2

In order to develop a simple and sensitive method for detecting human polyomavirus DNA in the urine of patients by the polymerase chain reaction (PCR), it was found that the viral DNA could be released from urine by proteinase K and then amplified by PCR directly, without additional treatment such as ultracentrifugation or DNA extraction. Direct PCR amplification of viral DNA from urine was volume limited and 5 μl of urine appeared to be the optimum amount for direct PCR amplification. When the urine volume was greater than 10 μl, the results of PCR were inconsistent. However, the urine volume could be increased after dialysis to remove possible inhibitor(s) which may interfere with PCR. Direct PCR amplification of patient urine is convenient and eliminates several steps which can cause loss of DNA from the sample.