beta.-Lactamase-catalyzed aminolysis of depsipeptides: amine specificity and steady-state kinetics

• Published in: Biochemistry (Easton) 1989-08, Vol.28 (17), p.6863-6870
• Main Authors: Pazhanisamy, S, Govardhan, Chandrika P, Pratt, R. F
• Format: Article
• Language: English
• Subjects: Amino Acids; beta-Lactamases - metabolism; Binding Sites; depsipeptides; Enterobacter - enzymology; Enterobacter cloacae; Enterobacteriaceae - enzymology; Exact sciences and technology; Glycine - metabolism; Isomerism; Kinetics; Mathematical analysis; Mathematics; Models, Theoretical; Phenylacetates - metabolism; Potential theory; Sciences and techniques of general use; Substrate Specificity
• ISSN: 0006-2960; 1520-4995
• DOI: 10.1021/bi00443a013

beta-Lactamases catalyze not only the hydrolysis but also the aminolysis of certain depsipeptides [Pratt, R. F., & Govardhan, C. P. (1984) Proc. Natl. Acad. Sci. U.S.A. 81, 1302-1306]. This paper explores further the specificity of the aminolysis reaction with respect to the structure of the amine and also the steady-state kinetics of the reaction. The amines preferred by the class C beta-lactamase of Enterobacter cloacae P99 appear to be aromatic D-alpha-amino acids. The general order of substrate effectiveness at pH 7.5 appears to be aromatic D-alpha-amino acids greater than large aliphatic D-alpha-amino acids greater than small aliphatic D-alpha-amino acids approximately small aliphatic L-alpha-amino acids greater than large L-alpha-amino acids. Charges on the aliphatic side chains seem unimportant. Ineffective as acyl acceptors were beta-amino acids, alpha-amino phosphonic acids, and, in general, amines, including amino acid carboxyl derivatives and peptides. There is thus strong evidence for specific interaction between the amine and the enzyme. A detailed kinetics study was made of the P99 beta-lactamase-catalyzed aminolysis of m-[[(phenylacetyl)glycyl]oxy]benzoic acid by D-phenylalanine. The steady-state kinetics were complex because of the presence of parallel enzyme-catalyzed hydrolysis and aminolysis reactions. An empirical rate equation was obtained for the total reaction. This has important elements in common with that previously found for the aminolysis of specific peptides by the DD-peptidases of various Streptomyces strains [e.g., Frere, J.-M., Ghuysen, J.-M., Perkins, H.R., & Nieto, M. (1973) Biochem. J. 135, 483-492].