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Crystal Structure of a Calcium-Phospholipid Binding Domain from Cytosolic Phospholipase A2
Cytosolic phospholipase A2 (cPLA2) is a calcium-sensitive 85-kDa enzyme that hydrolyzes arachidonic acid-containing membrane phospholipids to initiate the biosynthesis of eicosanoids and platelet-activating factor, potent inflammatory mediators. The calcium-dependent activation of the enzyme is medi...
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Published in: | The Journal of biological chemistry 1998-01, Vol.273 (3), p.1596-1604 |
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container_title | The Journal of biological chemistry |
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creator | Perisic, Olga Fong, Sun Lynch, Denise E. Bycroft, Mark Williams, Roger L. |
description | Cytosolic phospholipase A2 (cPLA2) is a calcium-sensitive 85-kDa enzyme that hydrolyzes arachidonic acid-containing membrane phospholipids to initiate the biosynthesis of eicosanoids and platelet-activating factor, potent inflammatory mediators. The calcium-dependent activation of the enzyme is mediated by an N-terminal C2 domain, which is responsible for calcium-dependent translocation of the enzyme to membranes and that enables the intact enzyme to hydrolyze membrane-resident substrates. The 2.4-Å x-ray crystal structure of this C2 domain was solved by multiple isomorphous replacement and reveals a β-sandwich with the same topology as the C2 domain from phosphoinositide-specific phospholipase Cδ1. Two clusters of exposed hydrophobic residues surround two adjacent calcium binding sites. This region, along with an adjoining strip of basic residues, appear to constitute the membrane binding motif. The structure provides a striking insight into the relative importance of hydrophobic and electrostatic components of membrane binding for cPLA2. Although hydrophobic interactions predominate for cPLA2, for other C2 domains such as in “conventional” protein kinase C and synaptotagmins, electrostatic forces prevail. |
doi_str_mv | 10.1074/jbc.273.3.1596 |
format | article |
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The calcium-dependent activation of the enzyme is mediated by an N-terminal C2 domain, which is responsible for calcium-dependent translocation of the enzyme to membranes and that enables the intact enzyme to hydrolyze membrane-resident substrates. The 2.4-Å x-ray crystal structure of this C2 domain was solved by multiple isomorphous replacement and reveals a β-sandwich with the same topology as the C2 domain from phosphoinositide-specific phospholipase Cδ1. Two clusters of exposed hydrophobic residues surround two adjacent calcium binding sites. This region, along with an adjoining strip of basic residues, appear to constitute the membrane binding motif. The structure provides a striking insight into the relative importance of hydrophobic and electrostatic components of membrane binding for cPLA2. 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Although hydrophobic interactions predominate for cPLA2, for other C2 domains such as in “conventional” protein kinase C and synaptotagmins, electrostatic forces prevail.</description><subject>Amino Acid Sequence</subject><subject>Binding Sites</subject><subject>Calcium - metabolism</subject><subject>Cloning, Molecular</subject><subject>Crystallography, X-Ray</subject><subject>Cytosol - enzymology</subject><subject>Humans</subject><subject>Isoenzymes - metabolism</subject><subject>Models, Chemical</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Phospholipase C delta</subject><subject>Phospholipases A - chemistry</subject><subject>Phospholipases A2</subject><subject>Phospholipids - metabolism</subject><subject>Protein Structure, Secondary</subject><subject>Type C Phospholipases - metabolism</subject><issn>0021-9258</issn><issn>1083-351X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><recordid>eNp1kEFr3DAQRkVp2GzSXnsLiB56sytZtiUfN27SBhYSSAulFyFL47WCbW0kO2X_fbTskpBD5jKH78038BD6QklKCc-_PzQ6zThLWUqLqvyAlpQIlrCC_v2IloRkNKmyQpyisxAeSJy8ogu0qHJGOKFL9K_2uzCpHt9PftbT7AG7Fitcq17beUjuOhe2nevt1hp8aUdjxw3-4QZlR9x6N-B6N7kQc41fURUAr7JP6KRVfYDPx32O_lxf_a5_Jevbnzf1ap3onGdTYhTNK60JNKoRDa1YyWmuypYZ0rCSqsI0meCUZy1AWQghCs6EyHlVkMxwo9g5-nbo3Xr3OEOY5GCDhr5XI7g5SF6VZUlpHsH0AGrvQvDQyq23g_I7SYncy5RRpowyJZN7mfHg4tg8NwOYF_xoL-ZfD3lnN91_60E21ukOhrcl4gBBdPBkwcugLYwaTDzQkzTOvvf_GZ5wjkg</recordid><startdate>19980116</startdate><enddate>19980116</enddate><creator>Perisic, Olga</creator><creator>Fong, Sun</creator><creator>Lynch, Denise E.</creator><creator>Bycroft, Mark</creator><creator>Williams, Roger L.</creator><general>Elsevier Inc</general><general>American Society for Biochemistry and Molecular Biology</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>19980116</creationdate><title>Crystal Structure of a Calcium-Phospholipid Binding Domain from Cytosolic Phospholipase A2</title><author>Perisic, Olga ; Fong, Sun ; Lynch, Denise E. ; Bycroft, Mark ; Williams, Roger L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c472t-da149cc0ebab8b1936714a6f3d0b361a5db287172fee6588857388479502d7da3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>Amino Acid Sequence</topic><topic>Binding Sites</topic><topic>Calcium - metabolism</topic><topic>Cloning, Molecular</topic><topic>Crystallography, X-Ray</topic><topic>Cytosol - enzymology</topic><topic>Humans</topic><topic>Isoenzymes - metabolism</topic><topic>Models, Chemical</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>Phospholipase C delta</topic><topic>Phospholipases A - chemistry</topic><topic>Phospholipases A2</topic><topic>Phospholipids - metabolism</topic><topic>Protein Structure, Secondary</topic><topic>Type C Phospholipases - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Perisic, Olga</creatorcontrib><creatorcontrib>Fong, Sun</creatorcontrib><creatorcontrib>Lynch, Denise E.</creatorcontrib><creatorcontrib>Bycroft, Mark</creatorcontrib><creatorcontrib>Williams, Roger L.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>The Journal of biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Perisic, Olga</au><au>Fong, Sun</au><au>Lynch, Denise E.</au><au>Bycroft, Mark</au><au>Williams, Roger L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Crystal Structure of a Calcium-Phospholipid Binding Domain from Cytosolic Phospholipase A2</atitle><jtitle>The Journal of biological chemistry</jtitle><addtitle>J Biol Chem</addtitle><date>1998-01-16</date><risdate>1998</risdate><volume>273</volume><issue>3</issue><spage>1596</spage><epage>1604</epage><pages>1596-1604</pages><issn>0021-9258</issn><eissn>1083-351X</eissn><abstract>Cytosolic phospholipase A2 (cPLA2) is a calcium-sensitive 85-kDa enzyme that hydrolyzes arachidonic acid-containing membrane phospholipids to initiate the biosynthesis of eicosanoids and platelet-activating factor, potent inflammatory mediators. The calcium-dependent activation of the enzyme is mediated by an N-terminal C2 domain, which is responsible for calcium-dependent translocation of the enzyme to membranes and that enables the intact enzyme to hydrolyze membrane-resident substrates. The 2.4-Å x-ray crystal structure of this C2 domain was solved by multiple isomorphous replacement and reveals a β-sandwich with the same topology as the C2 domain from phosphoinositide-specific phospholipase Cδ1. Two clusters of exposed hydrophobic residues surround two adjacent calcium binding sites. This region, along with an adjoining strip of basic residues, appear to constitute the membrane binding motif. The structure provides a striking insight into the relative importance of hydrophobic and electrostatic components of membrane binding for cPLA2. 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subjects | Amino Acid Sequence Binding Sites Calcium - metabolism Cloning, Molecular Crystallography, X-Ray Cytosol - enzymology Humans Isoenzymes - metabolism Models, Chemical Models, Molecular Molecular Sequence Data Phospholipase C delta Phospholipases A - chemistry Phospholipases A2 Phospholipids - metabolism Protein Structure, Secondary Type C Phospholipases - metabolism |
title | Crystal Structure of a Calcium-Phospholipid Binding Domain from Cytosolic Phospholipase A2 |
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