Nucleolar targeting of 5S RNA in Xenopus laevis oocytes: Somatic-type nucleotide substitutions enhance nucleolar localization

• Published in: Journal of cellular biochemistry 1998-06, Vol.69 (4), p.490-505
• Main Authors: North, Melanie T., Allison, Lizabeth A.
• Format: Article
• Language: English
• Subjects: Animals; Base Sequence; Cell Fractionation; Cell Nucleolus - metabolism; Microinjections; Molecular Sequence Data; Mutation - physiology; nuclear import; Nucleic Acid Conformation; nucleolus; Oocytes - metabolism; ribonucleoprotein particles; ribosomal protein L5; Ribosomal Proteins - metabolism; ribosome assembly; RNA; RNA, Ribosomal, 5S - chemistry; RNA, Ribosomal, 5S - genetics; RNA, Ribosomal, 5S - metabolism; TFIIIA; Xenopus laevis
• ISSN: 0730-2312; 1097-4644
• DOI: 10.1002/(SICI)1097-4644(19980615)69:4<490::AID-JCB10>3.0.CO;2-D

In Xenopus laevis oocytes, 5S RNA is stored in the cytoplasm until vitellogenesis, at which time it is imported into the nucleus and targeted to nucleoli for ribosome assembly. This article shows that throughout oogenesis there is a pool of nuclear 5S RNA which is not nucleolar‐associated. This distribution reflects that of oocyte‐type 5S RNA, which is the major 5S RNA species in oocytes; only small amounts of somatic‐type, which differs by six nucleotides, are synthesized. Indeed, 32P‐labeled oocyte‐type 5S RNA showed a degree of nucleolar localization similar to endogenous 5S RNA (33%) after microinjection. In contrast, 32P‐labeled somatic‐type 5S RNA showed significantly enhanced localization, whereby 70% of nuclear RNA was associated with nucleoli. A chimeric RNA molecule containing only one somatic‐specific nucleotide substitution also showed enhanced localization, in addition to other somatic‐specific phenotypes, including enhanced nuclear import and ribosome incorporation. The distribution of 35S‐labeled ribosomal protein L5 was similar to that of oocyte‐type 5S RNA, even when preassembled with somatic‐type 5S RNA. The distribution of a series of 5S RNA mutants was also analyzed. These mutants showed various degrees of localization, suggesting that the efficiency of nucleolar targeting can be influenced by many discrete regions of the 5S RNA molecule. J. Cell. Biochem. 69:490–505, 1998. © 1998 Wiley‐Liss, Inc.