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Group A Streptococci from a Remote Community Have Novel Multilocus Genotypes but Share emm Types and Housekeeping Alleles with Isolates from Worldwide Sources
Group A streptococci (GAS) cause several human diseases that differentially affect distinct host populations. Genotypes were defined by multilocus sequence typing and emm typing for 137 organisms collected from individuals in a remote aboriginal island community in tropical Australia and compared wi...
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Published in: | The Journal of infectious diseases 2004-02, Vol.189 (4), p.717-723 |
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container_title | The Journal of infectious diseases |
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creator | McGregor, Karen F. Bilek, Nicole Bennett, Alicia Kalia, Awdhesh Beall, Bernard Carapetis, Jonathan R. Currie, Bart J. Sriprakash, Kadaba S. Spratt, Brian G. Bessen, Debra E. |
description | Group A streptococci (GAS) cause several human diseases that differentially affect distinct host populations. Genotypes were defined by multilocus sequence typing and emm typing for 137 organisms collected from individuals in a remote aboriginal island community in tropical Australia and compared with >200 isolates obtained from sources elsewhere in the world. The majority of aboriginal-derived isolates shared emm types and housekeeping alleles with GAS isolates recovered from outside Australia, but these emm types and alleles were in novel combinations. There were many examples in which isolates from aboriginal and non-Australian subjects shared the same emm type, but for ∼50% of emm types, the multilocus genotypes of isolates of the same emm type but from different regions were very different. A single emm type may typically define a single clone within the United States and on the remote island that is the focus of this study, but in many cases, these clones will be different, and this finding has implications for attempts to make global associations between emm types and certain disease manifestations. |
doi_str_mv | 10.1086/381452 |
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Genotypes were defined by multilocus sequence typing and emm typing for 137 organisms collected from individuals in a remote aboriginal island community in tropical Australia and compared with >200 isolates obtained from sources elsewhere in the world. The majority of aboriginal-derived isolates shared emm types and housekeeping alleles with GAS isolates recovered from outside Australia, but these emm types and alleles were in novel combinations. There were many examples in which isolates from aboriginal and non-Australian subjects shared the same emm type, but for ∼50% of emm types, the multilocus genotypes of isolates of the same emm type but from different regions were very different. A single emm type may typically define a single clone within the United States and on the remote island that is the focus of this study, but in many cases, these clones will be different, and this finding has implications for attempts to make global associations between emm types and certain disease manifestations.</description><identifier>ISSN: 0022-1899</identifier><identifier>EISSN: 1537-6613</identifier><identifier>DOI: 10.1086/381452</identifier><identifier>PMID: 14767827</identifier><identifier>CODEN: JIDIAQ</identifier><language>eng</language><publisher>Chicago, IL: The University of Chicago Press</publisher><subject>Alleles ; Australia ; Bacteria ; Bacterial Proteins - genetics ; Bacterial Typing Techniques ; Bacteriology ; Biological and medical sciences ; Carrier Proteins - genetics ; Epidemiology ; Fundamental and applied biological sciences. Psychology ; Gas recovery ; Genetic loci ; Genotype ; Genotypes ; Geographic regions ; Housekeeping ; Humans ; Infections ; Infectious diseases ; Island life ; Medical sciences ; Microbiology ; Miscellaneous ; Pacific Islands ; Streptococcal Infections - microbiology ; Streptococcus pyogenes ; Streptococcus pyogenes - classification ; Streptococcus pyogenes - genetics ; Streptococcus pyogenes - isolation & purification ; Streptococcus pyogenes - pathogenicity</subject><ispartof>The Journal of infectious diseases, 2004-02, Vol.189 (4), p.717-723</ispartof><rights>Copyright 2004 Infectious Diseases Society of America</rights><rights>2004 by the Infectious Diseases Society of America 2004</rights><rights>2004 INIST-CNRS</rights><rights>Copyright University of Chicago, acting through its Press Feb 15 2004</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c451t-40e3bb362aa6c8efd7b336354acb322b9b7542a169202e201132b0e78fca52a63</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/30077435$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/30077435$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,58238,58471</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=15725995$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/14767827$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>McGregor, Karen F.</creatorcontrib><creatorcontrib>Bilek, Nicole</creatorcontrib><creatorcontrib>Bennett, Alicia</creatorcontrib><creatorcontrib>Kalia, Awdhesh</creatorcontrib><creatorcontrib>Beall, Bernard</creatorcontrib><creatorcontrib>Carapetis, Jonathan R.</creatorcontrib><creatorcontrib>Currie, Bart J.</creatorcontrib><creatorcontrib>Sriprakash, Kadaba S.</creatorcontrib><creatorcontrib>Spratt, Brian G.</creatorcontrib><creatorcontrib>Bessen, Debra E.</creatorcontrib><title>Group A Streptococci from a Remote Community Have Novel Multilocus Genotypes but Share emm Types and Housekeeping Alleles with Isolates from Worldwide Sources</title><title>The Journal of infectious diseases</title><addtitle>The Journal of Infectious Diseases</addtitle><addtitle>The Journal of Infectious Diseases</addtitle><description>Group A streptococci (GAS) cause several human diseases that differentially affect distinct host populations. Genotypes were defined by multilocus sequence typing and emm typing for 137 organisms collected from individuals in a remote aboriginal island community in tropical Australia and compared with >200 isolates obtained from sources elsewhere in the world. The majority of aboriginal-derived isolates shared emm types and housekeeping alleles with GAS isolates recovered from outside Australia, but these emm types and alleles were in novel combinations. There were many examples in which isolates from aboriginal and non-Australian subjects shared the same emm type, but for ∼50% of emm types, the multilocus genotypes of isolates of the same emm type but from different regions were very different. A single emm type may typically define a single clone within the United States and on the remote island that is the focus of this study, but in many cases, these clones will be different, and this finding has implications for attempts to make global associations between emm types and certain disease manifestations.</description><subject>Alleles</subject><subject>Australia</subject><subject>Bacteria</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Typing Techniques</subject><subject>Bacteriology</subject><subject>Biological and medical sciences</subject><subject>Carrier Proteins - genetics</subject><subject>Epidemiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gas recovery</subject><subject>Genetic loci</subject><subject>Genotype</subject><subject>Genotypes</subject><subject>Geographic regions</subject><subject>Housekeeping</subject><subject>Humans</subject><subject>Infections</subject><subject>Infectious diseases</subject><subject>Island life</subject><subject>Medical sciences</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Pacific Islands</subject><subject>Streptococcal Infections - microbiology</subject><subject>Streptococcus pyogenes</subject><subject>Streptococcus pyogenes - classification</subject><subject>Streptococcus pyogenes - genetics</subject><subject>Streptococcus pyogenes - isolation & purification</subject><subject>Streptococcus pyogenes - pathogenicity</subject><issn>0022-1899</issn><issn>1537-6613</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><recordid>eNqF0d1u0zAUB_AIgVgZ8AYgDwnuAv52cllV0E4aINEB024sxz1h6Zw42M62vsyelWytVgkJcWXZ56dzfPTPspcEvye4kB9YQbigj7IJEUzlUhL2OJtgTGlOirI8yJ7FuMYYcybV0-yAcCVVQdUku50HP_RoipYpQJ-89dY2qA6-RQZ9g9YnQDPftkPXpA1amCtAX_wVOPR5cKlx3g4RzaHzadNDRNWQ0PLCBEDQtuj0_s10K7TwQ4RLgL7pfqGpc-DGwnWTLtBx9M6k8XY_8qcPbnXdrAAt_RAsxOfZk9q4CC9252H2_dPH09kiP_k6P55NT3LLBUk5x8CqiklqjLQF1CtVMSaZ4MZWjNKqrJTg1BBZUkyBYkIYrTCoorZGUCPZYfZu27cP_vcAMem2iRacMx2Mf9cFJrzksvgvJCWVtMBqhG_-gutxpW5cQlPKSkI4Z_tuNvgYA9S6D01rwkYTrO9y1dtcR_h6122oWljt2S7IEbzdAROtcXUwnW3i3glFRVmK0R1t3Zj6v4e92pp1TD48KIaxUpzd9ci39SYmuHmom3CppWJK6MXZuT7HBT1T4oeW7A8wV80f</recordid><startdate>20040215</startdate><enddate>20040215</enddate><creator>McGregor, Karen F.</creator><creator>Bilek, Nicole</creator><creator>Bennett, Alicia</creator><creator>Kalia, Awdhesh</creator><creator>Beall, Bernard</creator><creator>Carapetis, Jonathan R.</creator><creator>Currie, Bart J.</creator><creator>Sriprakash, Kadaba S.</creator><creator>Spratt, Brian G.</creator><creator>Bessen, Debra E.</creator><general>The University of Chicago Press</general><general>University of Chicago Press</general><general>Oxford University Press</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>K9.</scope><scope>NAPCQ</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>20040215</creationdate><title>Group A Streptococci from a Remote Community Have Novel Multilocus Genotypes but Share emm Types and Housekeeping Alleles with Isolates from Worldwide Sources</title><author>McGregor, Karen F. ; Bilek, Nicole ; Bennett, Alicia ; Kalia, Awdhesh ; Beall, Bernard ; Carapetis, Jonathan R. ; Currie, Bart J. ; Sriprakash, Kadaba S. ; Spratt, Brian G. ; Bessen, Debra E.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c451t-40e3bb362aa6c8efd7b336354acb322b9b7542a169202e201132b0e78fca52a63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Alleles</topic><topic>Australia</topic><topic>Bacteria</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Typing Techniques</topic><topic>Bacteriology</topic><topic>Biological and medical sciences</topic><topic>Carrier Proteins - genetics</topic><topic>Epidemiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gas recovery</topic><topic>Genetic loci</topic><topic>Genotype</topic><topic>Genotypes</topic><topic>Geographic regions</topic><topic>Housekeeping</topic><topic>Humans</topic><topic>Infections</topic><topic>Infectious diseases</topic><topic>Island life</topic><topic>Medical sciences</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Pacific Islands</topic><topic>Streptococcal Infections - microbiology</topic><topic>Streptococcus pyogenes</topic><topic>Streptococcus pyogenes - classification</topic><topic>Streptococcus pyogenes - genetics</topic><topic>Streptococcus pyogenes - isolation & purification</topic><topic>Streptococcus pyogenes - pathogenicity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>McGregor, Karen F.</creatorcontrib><creatorcontrib>Bilek, Nicole</creatorcontrib><creatorcontrib>Bennett, Alicia</creatorcontrib><creatorcontrib>Kalia, Awdhesh</creatorcontrib><creatorcontrib>Beall, Bernard</creatorcontrib><creatorcontrib>Carapetis, Jonathan R.</creatorcontrib><creatorcontrib>Currie, Bart J.</creatorcontrib><creatorcontrib>Sriprakash, Kadaba S.</creatorcontrib><creatorcontrib>Spratt, Brian G.</creatorcontrib><creatorcontrib>Bessen, Debra E.</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Premium</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>The Journal of infectious diseases</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>McGregor, Karen F.</au><au>Bilek, Nicole</au><au>Bennett, Alicia</au><au>Kalia, Awdhesh</au><au>Beall, Bernard</au><au>Carapetis, Jonathan R.</au><au>Currie, Bart J.</au><au>Sriprakash, Kadaba S.</au><au>Spratt, Brian G.</au><au>Bessen, Debra E.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Group A Streptococci from a Remote Community Have Novel Multilocus Genotypes but Share emm Types and Housekeeping Alleles with Isolates from Worldwide Sources</atitle><jtitle>The Journal of infectious diseases</jtitle><stitle>The Journal of Infectious Diseases</stitle><addtitle>The Journal of Infectious Diseases</addtitle><date>2004-02-15</date><risdate>2004</risdate><volume>189</volume><issue>4</issue><spage>717</spage><epage>723</epage><pages>717-723</pages><issn>0022-1899</issn><eissn>1537-6613</eissn><coden>JIDIAQ</coden><abstract>Group A streptococci (GAS) cause several human diseases that differentially affect distinct host populations. Genotypes were defined by multilocus sequence typing and emm typing for 137 organisms collected from individuals in a remote aboriginal island community in tropical Australia and compared with >200 isolates obtained from sources elsewhere in the world. The majority of aboriginal-derived isolates shared emm types and housekeeping alleles with GAS isolates recovered from outside Australia, but these emm types and alleles were in novel combinations. There were many examples in which isolates from aboriginal and non-Australian subjects shared the same emm type, but for ∼50% of emm types, the multilocus genotypes of isolates of the same emm type but from different regions were very different. 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subjects | Alleles Australia Bacteria Bacterial Proteins - genetics Bacterial Typing Techniques Bacteriology Biological and medical sciences Carrier Proteins - genetics Epidemiology Fundamental and applied biological sciences. Psychology Gas recovery Genetic loci Genotype Genotypes Geographic regions Housekeeping Humans Infections Infectious diseases Island life Medical sciences Microbiology Miscellaneous Pacific Islands Streptococcal Infections - microbiology Streptococcus pyogenes Streptococcus pyogenes - classification Streptococcus pyogenes - genetics Streptococcus pyogenes - isolation & purification Streptococcus pyogenes - pathogenicity |
title | Group A Streptococci from a Remote Community Have Novel Multilocus Genotypes but Share emm Types and Housekeeping Alleles with Isolates from Worldwide Sources |
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