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Effects of carbon source on expression of alcohol oxidase activity and on morphologic pattern of YR-1 strain, a filamentous fungus isolated from petroleum-contaminated soils
Soluble alcohol oxidase (AO) activity was detected in the supernatant fraction of a high-speed centrifugation procedure after ballistic cellular homo-genization to break the mycelium from a filamentous fungus strain named YR-1, isolated from petroleum-contaminated soils. AO activity from aerobically...
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Published in: | Applied biochemistry and biotechnology 2004-03, Vol.113 (1-3), p.161-171 |
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description | Soluble alcohol oxidase (AO) activity was detected in the supernatant fraction of a high-speed centrifugation procedure after ballistic cellular homo-genization to break the mycelium from a filamentous fungus strain named YR-1, isolated from petroleum-contaminated soils. AO activity from aerobically grown mycelium was detected in growth media containing different carbon sources, including alcohols and hydrocarbons but not in glucose. In previous work, zymogram analysis conducted with crude extracts from aerobic mycelium of YR-1 strain indicated the existence of two AO enzymes originally named AO-1 and AO-2. In the present study, we were able to separate the AO-1 band into two bands depending on culture conditions, carbon source, and polyacrylamide gel electrophoresis (PAGE) separation conditions; the enzyme activity pattern in zymograms from cell-free extracts exhibited three different bands after native PAGE. New nomenclature was used for upper bands AO-1 and AO-2 and lower band AO-3, respectively. The expression of AO activity was studied in the absence of glucose in the culture media and in the presence of hydrocarbons or petroleum as sole carbon source, suggesting that AO expression could be subjected to two regulatory possibilities: carbon catabolite regulation by glucose and induction by hydrocarbons. The possibility of catabolic inhibition of AO by glucose in the active enzyme was also tested, and the results confirm that this kind of regulatory mechanism is not present in AO activity. |
doi_str_mv | 10.1385/ABAB:113:1-3:161 |
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AO activity from aerobically grown mycelium was detected in growth media containing different carbon sources, including alcohols and hydrocarbons but not in glucose. In previous work, zymogram analysis conducted with crude extracts from aerobic mycelium of YR-1 strain indicated the existence of two AO enzymes originally named AO-1 and AO-2. In the present study, we were able to separate the AO-1 band into two bands depending on culture conditions, carbon source, and polyacrylamide gel electrophoresis (PAGE) separation conditions; the enzyme activity pattern in zymograms from cell-free extracts exhibited three different bands after native PAGE. New nomenclature was used for upper bands AO-1 and AO-2 and lower band AO-3, respectively. The expression of AO activity was studied in the absence of glucose in the culture media and in the presence of hydrocarbons or petroleum as sole carbon source, suggesting that AO expression could be subjected to two regulatory possibilities: carbon catabolite regulation by glucose and induction by hydrocarbons. The possibility of catabolic inhibition of AO by glucose in the active enzyme was also tested, and the results confirm that this kind of regulatory mechanism is not present in AO activity.</description><identifier>ISSN: 0273-2289</identifier><identifier>EISSN: 1559-0291</identifier><identifier>EISSN: 0273-2289</identifier><identifier>DOI: 10.1385/ABAB:113:1-3:161</identifier><identifier>PMID: 15054203</identifier><language>eng</language><publisher>United States: Springer Nature B.V</publisher><subject>Activity patterns ; Alcohol ; Alcohol oxidase ; alcohol oxidoreductases ; Alcohol Oxidoreductases - chemistry ; Alcohol Oxidoreductases - metabolism ; Biochemistry ; Biotechnology - methods ; Carbon ; Carbon - chemistry ; Carbon sources ; Cell culture ; Cell Division ; Cell-Free System ; Centrifugation ; Culture Media ; Electrophoresis ; Electrophoresis, Polyacrylamide Gel ; Enzymatic activity ; Enzyme activity ; Enzymes ; Fungi ; Fungi - metabolism ; Gel electrophoresis ; Glucose ; Glucose - chemistry ; Growth media ; Hydrocarbons ; Hydrocarbons - chemistry ; Mycelia ; Petroleum ; Petroleum hydrocarbons ; polluted soils ; Polyacrylamide ; Regulatory mechanisms (biology) ; Soil ; Soil contamination ; Soil microorganisms ; Soil pollution ; Soils ; Studies ; Time Factors</subject><ispartof>Applied biochemistry and biotechnology, 2004-03, Vol.113 (1-3), p.161-171</ispartof><rights>Humana Press Inc. 2004</rights><rights>Humana Press Inc. 2004.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c408t-ae3cc480ebd1f925a0fef8153c91dc79c1f8e1f400751e6b5bbe71afcaf37ed93</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15054203$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rodriguez Robelo, C</creatorcontrib><creatorcontrib>Zazueta Novoa, V</creatorcontrib><creatorcontrib>Zazueta-Sandoval, R</creatorcontrib><title>Effects of carbon source on expression of alcohol oxidase activity and on morphologic pattern of YR-1 strain, a filamentous fungus isolated from petroleum-contaminated soils</title><title>Applied biochemistry and biotechnology</title><addtitle>Appl Biochem Biotechnol</addtitle><description>Soluble alcohol oxidase (AO) activity was detected in the supernatant fraction of a high-speed centrifugation procedure after ballistic cellular homo-genization to break the mycelium from a filamentous fungus strain named YR-1, isolated from petroleum-contaminated soils. AO activity from aerobically grown mycelium was detected in growth media containing different carbon sources, including alcohols and hydrocarbons but not in glucose. In previous work, zymogram analysis conducted with crude extracts from aerobic mycelium of YR-1 strain indicated the existence of two AO enzymes originally named AO-1 and AO-2. In the present study, we were able to separate the AO-1 band into two bands depending on culture conditions, carbon source, and polyacrylamide gel electrophoresis (PAGE) separation conditions; the enzyme activity pattern in zymograms from cell-free extracts exhibited three different bands after native PAGE. New nomenclature was used for upper bands AO-1 and AO-2 and lower band AO-3, respectively. The expression of AO activity was studied in the absence of glucose in the culture media and in the presence of hydrocarbons or petroleum as sole carbon source, suggesting that AO expression could be subjected to two regulatory possibilities: carbon catabolite regulation by glucose and induction by hydrocarbons. The possibility of catabolic inhibition of AO by glucose in the active enzyme was also tested, and the results confirm that this kind of regulatory mechanism is not present in AO activity.</description><subject>Activity patterns</subject><subject>Alcohol</subject><subject>Alcohol oxidase</subject><subject>alcohol oxidoreductases</subject><subject>Alcohol Oxidoreductases - chemistry</subject><subject>Alcohol Oxidoreductases - metabolism</subject><subject>Biochemistry</subject><subject>Biotechnology - methods</subject><subject>Carbon</subject><subject>Carbon - chemistry</subject><subject>Carbon sources</subject><subject>Cell culture</subject><subject>Cell Division</subject><subject>Cell-Free System</subject><subject>Centrifugation</subject><subject>Culture Media</subject><subject>Electrophoresis</subject><subject>Electrophoresis, Polyacrylamide Gel</subject><subject>Enzymatic activity</subject><subject>Enzyme activity</subject><subject>Enzymes</subject><subject>Fungi</subject><subject>Fungi - metabolism</subject><subject>Gel electrophoresis</subject><subject>Glucose</subject><subject>Glucose - chemistry</subject><subject>Growth media</subject><subject>Hydrocarbons</subject><subject>Hydrocarbons - chemistry</subject><subject>Mycelia</subject><subject>Petroleum</subject><subject>Petroleum hydrocarbons</subject><subject>polluted soils</subject><subject>Polyacrylamide</subject><subject>Regulatory mechanisms (biology)</subject><subject>Soil</subject><subject>Soil contamination</subject><subject>Soil microorganisms</subject><subject>Soil pollution</subject><subject>Soils</subject><subject>Studies</subject><subject>Time Factors</subject><issn>0273-2289</issn><issn>1559-0291</issn><issn>0273-2289</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><recordid>eNp9ksFrFTEQxhdR7LP17kmDgl66mtlsNpveXku1hYKg9uApZLOTZ8ruZptkpf2j_B_N63sgCHoYZuD7fcMkfEXxAuh7YC3_sD5dn54AsBMoczXwqFgB57KklYTHxYpWgpVV1cqD4lmMN5RC1XLxtDgATnldUbYqfp1biyZF4i0xOnR-ItEvwSDJE97NAWN0ecyyHoz_4Qfi71yvIxJtkvvp0j3RU7-lRx_mrPuNM2TWKWF4sH3_UgKJKWg3HRNNrBv0iFPySyR2mTa5uegHnbAnNviRzJiCH3AZS-OnpEc3PWjRuyEeFU-sHiI-3_fD4vrj-bezi_Lq86fLs_VVaWraplIjM6ZuKXY9WFlxTS3aFjgzEnojpAHbItiaUsEBm453HQrQ1mjLBPaSHRbvdnvn4G8XjEmNLhocBj1hPlzlXTy7-ZZ8-19SgJBVI0UG3_wF3uR_nvIrVNU0taCCNjRTr_9FgRQANaMsQ3QHmeBjDGjVHNyow70Cqra5UNtcqJwLBSpXA9nycr936Ubs_xj2QcjAqx1gtVd6E1xU118rCoxSyQUTjP0GP-a_0Q</recordid><startdate>20040301</startdate><enddate>20040301</enddate><creator>Rodriguez Robelo, C</creator><creator>Zazueta Novoa, V</creator><creator>Zazueta-Sandoval, R</creator><general>Springer Nature B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope><scope>7QO</scope><scope>7U7</scope><scope>M7N</scope></search><sort><creationdate>20040301</creationdate><title>Effects of carbon source on expression of alcohol oxidase activity and on morphologic pattern of YR-1 strain, a filamentous fungus isolated from petroleum-contaminated soils</title><author>Rodriguez Robelo, C ; Zazueta Novoa, V ; Zazueta-Sandoval, R</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c408t-ae3cc480ebd1f925a0fef8153c91dc79c1f8e1f400751e6b5bbe71afcaf37ed93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Activity patterns</topic><topic>Alcohol</topic><topic>Alcohol oxidase</topic><topic>alcohol oxidoreductases</topic><topic>Alcohol Oxidoreductases - chemistry</topic><topic>Alcohol Oxidoreductases - metabolism</topic><topic>Biochemistry</topic><topic>Biotechnology - methods</topic><topic>Carbon</topic><topic>Carbon - chemistry</topic><topic>Carbon sources</topic><topic>Cell culture</topic><topic>Cell Division</topic><topic>Cell-Free System</topic><topic>Centrifugation</topic><topic>Culture Media</topic><topic>Electrophoresis</topic><topic>Electrophoresis, Polyacrylamide Gel</topic><topic>Enzymatic activity</topic><topic>Enzyme activity</topic><topic>Enzymes</topic><topic>Fungi</topic><topic>Fungi - metabolism</topic><topic>Gel electrophoresis</topic><topic>Glucose</topic><topic>Glucose - chemistry</topic><topic>Growth media</topic><topic>Hydrocarbons</topic><topic>Hydrocarbons - chemistry</topic><topic>Mycelia</topic><topic>Petroleum</topic><topic>Petroleum hydrocarbons</topic><topic>polluted soils</topic><topic>Polyacrylamide</topic><topic>Regulatory mechanisms (biology)</topic><topic>Soil</topic><topic>Soil contamination</topic><topic>Soil microorganisms</topic><topic>Soil pollution</topic><topic>Soils</topic><topic>Studies</topic><topic>Time Factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rodriguez Robelo, C</creatorcontrib><creatorcontrib>Zazueta Novoa, V</creatorcontrib><creatorcontrib>Zazueta-Sandoval, R</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><jtitle>Applied biochemistry and biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rodriguez Robelo, C</au><au>Zazueta Novoa, V</au><au>Zazueta-Sandoval, R</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Effects of carbon source on expression of alcohol oxidase activity and on morphologic pattern of YR-1 strain, a filamentous fungus isolated from petroleum-contaminated soils</atitle><jtitle>Applied biochemistry and biotechnology</jtitle><addtitle>Appl Biochem Biotechnol</addtitle><date>2004-03-01</date><risdate>2004</risdate><volume>113</volume><issue>1-3</issue><spage>161</spage><epage>171</epage><pages>161-171</pages><issn>0273-2289</issn><eissn>1559-0291</eissn><eissn>0273-2289</eissn><abstract>Soluble alcohol oxidase (AO) activity was detected in the supernatant fraction of a high-speed centrifugation procedure after ballistic cellular homo-genization to break the mycelium from a filamentous fungus strain named YR-1, isolated from petroleum-contaminated soils. AO activity from aerobically grown mycelium was detected in growth media containing different carbon sources, including alcohols and hydrocarbons but not in glucose. In previous work, zymogram analysis conducted with crude extracts from aerobic mycelium of YR-1 strain indicated the existence of two AO enzymes originally named AO-1 and AO-2. In the present study, we were able to separate the AO-1 band into two bands depending on culture conditions, carbon source, and polyacrylamide gel electrophoresis (PAGE) separation conditions; the enzyme activity pattern in zymograms from cell-free extracts exhibited three different bands after native PAGE. New nomenclature was used for upper bands AO-1 and AO-2 and lower band AO-3, respectively. The expression of AO activity was studied in the absence of glucose in the culture media and in the presence of hydrocarbons or petroleum as sole carbon source, suggesting that AO expression could be subjected to two regulatory possibilities: carbon catabolite regulation by glucose and induction by hydrocarbons. The possibility of catabolic inhibition of AO by glucose in the active enzyme was also tested, and the results confirm that this kind of regulatory mechanism is not present in AO activity.</abstract><cop>United States</cop><pub>Springer Nature B.V</pub><pmid>15054203</pmid><doi>10.1385/ABAB:113:1-3:161</doi><tpages>11</tpages></addata></record> |
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subjects | Activity patterns Alcohol Alcohol oxidase alcohol oxidoreductases Alcohol Oxidoreductases - chemistry Alcohol Oxidoreductases - metabolism Biochemistry Biotechnology - methods Carbon Carbon - chemistry Carbon sources Cell culture Cell Division Cell-Free System Centrifugation Culture Media Electrophoresis Electrophoresis, Polyacrylamide Gel Enzymatic activity Enzyme activity Enzymes Fungi Fungi - metabolism Gel electrophoresis Glucose Glucose - chemistry Growth media Hydrocarbons Hydrocarbons - chemistry Mycelia Petroleum Petroleum hydrocarbons polluted soils Polyacrylamide Regulatory mechanisms (biology) Soil Soil contamination Soil microorganisms Soil pollution Soils Studies Time Factors |
title | Effects of carbon source on expression of alcohol oxidase activity and on morphologic pattern of YR-1 strain, a filamentous fungus isolated from petroleum-contaminated soils |
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