Loading…

fast and accurate algorithm for QTAIM integration in solids

A new algorithm is presented for the calculation of atomic properties, in the sense of the quantum theory of atoms in molecules. This new method, named QTREE, applies to solid-state densities and allows the computation of the atomic properties of all the atoms in the crystal in seconds to minutes. T...

Full description

Saved in:
Bibliographic Details
Published in:Journal of computational chemistry 2011-01, Vol.32 (2), p.291-305
Main Authors: Otero-de-la-Roza, A, Luaña, Víctor
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c4130-eb6299c38995c280c1a018e6e74c3aa3624d1511d577ea1781028befc5de24003
cites cdi_FETCH-LOGICAL-c4130-eb6299c38995c280c1a018e6e74c3aa3624d1511d577ea1781028befc5de24003
container_end_page 305
container_issue 2
container_start_page 291
container_title Journal of computational chemistry
container_volume 32
creator Otero-de-la-Roza, A
Luaña, Víctor
description A new algorithm is presented for the calculation of atomic properties, in the sense of the quantum theory of atoms in molecules. This new method, named QTREE, applies to solid-state densities and allows the computation of the atomic properties of all the atoms in the crystal in seconds to minutes. The basis of the method is the recursive subdivision of a symmetry-reduced wedge of the Wigner-Seitz cell, which in turn is expressed as a union of tetrahedra, plus the use of β-spheres to improve the performance. A considerable speedup is thus achieved compared with traditional quadrature-based schemes, justified by the poor performance of the latter because of the particular features of atomic basins in solids. QTREE can use both analytical or interpolated densities, calculates all the atomic properties available, and converges to the correct values in the limit of infinite precision. Several gradient path tracing and integration techniques are tested. Basin volumes and charges for a selected set of 11 crystals are determined as a test of the new method.
doi_str_mv 10.1002/jcc.21620
format article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_816384593</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>816384593</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4130-eb6299c38995c280c1a018e6e74c3aa3624d1511d577ea1781028befc5de24003</originalsourceid><addsrcrecordid>eNp1kU1v1DAQQC0EokvhwB-AiAvikHbGX7HFqdrSUihFiFb0ZnkdZ_GSjYudCPrvcUnbAxInW_Kbp9EzIc8R9hCA7m-c26MoKTwgCwQta62ay4dkAahpraTAHfIk5w0AMCH5Y7JDQXLBgC7I287msbJDW1nnpmRHX9l-HVMYv2-rLqbqy_nByacqDKNfl9cQh3KvcuxDm5-SR53ts392e-6Si6N358v39enn45PlwWntODKo_UpSrR1TWgtHFTi0gMpL33DHrGWS8hYFYiuaxltsFAJVK9850XrKy8675PXsvUrx5-TzaLYhO9_3dvBxykahZIoLzQr56h9yE6c0lOUK1HApOL3RvZkhl2LOyXfmKoWtTdcGwdz0NKWn-duzsC9uhdNq69t78i5gAfZn4Ffo_fX_TebDcnmnrOeJkEf_-37Cph9GNqwR5tvZsYGzw8MjIT6ay8K_nPnORmPXKWRz8ZVCKYsay-cK9gdup5P8</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>817465420</pqid></control><display><type>article</type><title>fast and accurate algorithm for QTAIM integration in solids</title><source>Wiley-Blackwell Read &amp; Publish Collection</source><creator>Otero-de-la-Roza, A ; Luaña, Víctor</creator><creatorcontrib>Otero-de-la-Roza, A ; Luaña, Víctor</creatorcontrib><description>A new algorithm is presented for the calculation of atomic properties, in the sense of the quantum theory of atoms in molecules. This new method, named QTREE, applies to solid-state densities and allows the computation of the atomic properties of all the atoms in the crystal in seconds to minutes. The basis of the method is the recursive subdivision of a symmetry-reduced wedge of the Wigner-Seitz cell, which in turn is expressed as a union of tetrahedra, plus the use of β-spheres to improve the performance. A considerable speedup is thus achieved compared with traditional quadrature-based schemes, justified by the poor performance of the latter because of the particular features of atomic basins in solids. QTREE can use both analytical or interpolated densities, calculates all the atomic properties available, and converges to the correct values in the limit of infinite precision. Several gradient path tracing and integration techniques are tested. Basin volumes and charges for a selected set of 11 crystals are determined as a test of the new method.</description><identifier>ISSN: 0192-8651</identifier><identifier>EISSN: 1096-987X</identifier><identifier>DOI: 10.1002/jcc.21620</identifier><identifier>PMID: 20645302</identifier><identifier>CODEN: JCCHDD</identifier><language>eng</language><publisher>Hoboken: Wiley Subscription Services, Inc., A Wiley Company</publisher><subject>Accuracy ; Algorithms ; atomic properties in solids ; Atoms &amp; subatomic particles ; atoms in molecules ; Crystal structure ; integration grid ; Molecular structure ; octree ; QTAIM ; Quantum theory ; Solids</subject><ispartof>Journal of computational chemistry, 2011-01, Vol.32 (2), p.291-305</ispartof><rights>Copyright © 2010 Wiley Periodicals, Inc.</rights><rights>Copyright John Wiley and Sons, Limited Jan 30, 2011</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4130-eb6299c38995c280c1a018e6e74c3aa3624d1511d577ea1781028befc5de24003</citedby><cites>FETCH-LOGICAL-c4130-eb6299c38995c280c1a018e6e74c3aa3624d1511d577ea1781028befc5de24003</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20645302$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Otero-de-la-Roza, A</creatorcontrib><creatorcontrib>Luaña, Víctor</creatorcontrib><title>fast and accurate algorithm for QTAIM integration in solids</title><title>Journal of computational chemistry</title><addtitle>J. Comput. Chem</addtitle><description>A new algorithm is presented for the calculation of atomic properties, in the sense of the quantum theory of atoms in molecules. This new method, named QTREE, applies to solid-state densities and allows the computation of the atomic properties of all the atoms in the crystal in seconds to minutes. The basis of the method is the recursive subdivision of a symmetry-reduced wedge of the Wigner-Seitz cell, which in turn is expressed as a union of tetrahedra, plus the use of β-spheres to improve the performance. A considerable speedup is thus achieved compared with traditional quadrature-based schemes, justified by the poor performance of the latter because of the particular features of atomic basins in solids. QTREE can use both analytical or interpolated densities, calculates all the atomic properties available, and converges to the correct values in the limit of infinite precision. Several gradient path tracing and integration techniques are tested. Basin volumes and charges for a selected set of 11 crystals are determined as a test of the new method.</description><subject>Accuracy</subject><subject>Algorithms</subject><subject>atomic properties in solids</subject><subject>Atoms &amp; subatomic particles</subject><subject>atoms in molecules</subject><subject>Crystal structure</subject><subject>integration grid</subject><subject>Molecular structure</subject><subject>octree</subject><subject>QTAIM</subject><subject>Quantum theory</subject><subject>Solids</subject><issn>0192-8651</issn><issn>1096-987X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNp1kU1v1DAQQC0EokvhwB-AiAvikHbGX7HFqdrSUihFiFb0ZnkdZ_GSjYudCPrvcUnbAxInW_Kbp9EzIc8R9hCA7m-c26MoKTwgCwQta62ay4dkAahpraTAHfIk5w0AMCH5Y7JDQXLBgC7I287msbJDW1nnpmRHX9l-HVMYv2-rLqbqy_nByacqDKNfl9cQh3KvcuxDm5-SR53ts392e-6Si6N358v39enn45PlwWntODKo_UpSrR1TWgtHFTi0gMpL33DHrGWS8hYFYiuaxltsFAJVK9850XrKy8675PXsvUrx5-TzaLYhO9_3dvBxykahZIoLzQr56h9yE6c0lOUK1HApOL3RvZkhl2LOyXfmKoWtTdcGwdz0NKWn-duzsC9uhdNq69t78i5gAfZn4Ffo_fX_TebDcnmnrOeJkEf_-37Cph9GNqwR5tvZsYGzw8MjIT6ay8K_nPnORmPXKWRz8ZVCKYsay-cK9gdup5P8</recordid><startdate>20110130</startdate><enddate>20110130</enddate><creator>Otero-de-la-Roza, A</creator><creator>Luaña, Víctor</creator><general>Wiley Subscription Services, Inc., A Wiley Company</general><general>Wiley Subscription Services, Inc</general><scope>FBQ</scope><scope>BSCLL</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>JQ2</scope><scope>7X8</scope></search><sort><creationdate>20110130</creationdate><title>fast and accurate algorithm for QTAIM integration in solids</title><author>Otero-de-la-Roza, A ; Luaña, Víctor</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4130-eb6299c38995c280c1a018e6e74c3aa3624d1511d577ea1781028befc5de24003</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Accuracy</topic><topic>Algorithms</topic><topic>atomic properties in solids</topic><topic>Atoms &amp; subatomic particles</topic><topic>atoms in molecules</topic><topic>Crystal structure</topic><topic>integration grid</topic><topic>Molecular structure</topic><topic>octree</topic><topic>QTAIM</topic><topic>Quantum theory</topic><topic>Solids</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Otero-de-la-Roza, A</creatorcontrib><creatorcontrib>Luaña, Víctor</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Computer Science Collection</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of computational chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Otero-de-la-Roza, A</au><au>Luaña, Víctor</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>fast and accurate algorithm for QTAIM integration in solids</atitle><jtitle>Journal of computational chemistry</jtitle><addtitle>J. Comput. Chem</addtitle><date>2011-01-30</date><risdate>2011</risdate><volume>32</volume><issue>2</issue><spage>291</spage><epage>305</epage><pages>291-305</pages><issn>0192-8651</issn><eissn>1096-987X</eissn><coden>JCCHDD</coden><abstract>A new algorithm is presented for the calculation of atomic properties, in the sense of the quantum theory of atoms in molecules. This new method, named QTREE, applies to solid-state densities and allows the computation of the atomic properties of all the atoms in the crystal in seconds to minutes. The basis of the method is the recursive subdivision of a symmetry-reduced wedge of the Wigner-Seitz cell, which in turn is expressed as a union of tetrahedra, plus the use of β-spheres to improve the performance. A considerable speedup is thus achieved compared with traditional quadrature-based schemes, justified by the poor performance of the latter because of the particular features of atomic basins in solids. QTREE can use both analytical or interpolated densities, calculates all the atomic properties available, and converges to the correct values in the limit of infinite precision. Several gradient path tracing and integration techniques are tested. Basin volumes and charges for a selected set of 11 crystals are determined as a test of the new method.</abstract><cop>Hoboken</cop><pub>Wiley Subscription Services, Inc., A Wiley Company</pub><pmid>20645302</pmid><doi>10.1002/jcc.21620</doi><tpages>15</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0192-8651
ispartof Journal of computational chemistry, 2011-01, Vol.32 (2), p.291-305
issn 0192-8651
1096-987X
language eng
recordid cdi_proquest_miscellaneous_816384593
source Wiley-Blackwell Read & Publish Collection
subjects Accuracy
Algorithms
atomic properties in solids
Atoms & subatomic particles
atoms in molecules
Crystal structure
integration grid
Molecular structure
octree
QTAIM
Quantum theory
Solids
title fast and accurate algorithm for QTAIM integration in solids
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-01T14%3A54%3A19IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=fast%20and%20accurate%20algorithm%20for%20QTAIM%20integration%20in%20solids&rft.jtitle=Journal%20of%20computational%20chemistry&rft.au=Otero-de-la-Roza,%20A&rft.date=2011-01-30&rft.volume=32&rft.issue=2&rft.spage=291&rft.epage=305&rft.pages=291-305&rft.issn=0192-8651&rft.eissn=1096-987X&rft.coden=JCCHDD&rft_id=info:doi/10.1002/jcc.21620&rft_dat=%3Cproquest_cross%3E816384593%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c4130-eb6299c38995c280c1a018e6e74c3aa3624d1511d577ea1781028befc5de24003%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=817465420&rft_id=info:pmid/20645302&rfr_iscdi=true