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Virtual Screening for Ligands of the Insect Molting Hormone Receptor
Insect growth is regulated by the orchestrated event of ecdysteroids and their receptor proteins. Agonists/antagonists of ecdysteroid receptor are predicted to disrupt normal growth, providing good candidates of new insecticides. A database of over 2 million compounds was subjected to a shape-based...
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Published in: | Journal of chemical information and modeling 2011-02, Vol.51 (2), p.296-305 |
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container_title | Journal of chemical information and modeling |
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creator | Harada, Toshiyuki Nakagawa, Yoshiaki Ogura, Takehiko Yamada, Yutaka Ohe, Takehiro Miyagawa, Hisashi |
description | Insect growth is regulated by the orchestrated event of ecdysteroids and their receptor proteins. Agonists/antagonists of ecdysteroid receptor are predicted to disrupt normal growth, providing good candidates of new insecticides. A database of over 2 million compounds was subjected to a shape-based virtual screening cascade to identify novel nonsteroidal hits similar to the known EcR ligand ponasterone A. Testing revealed micromolar hits against two strains of insect cells. Docking experiments against EcR were used to support the predicted binding mode of these ligands based on their overlay to ponasterone A. |
doi_str_mv | 10.1021/ci100400k |
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Agonists/antagonists of ecdysteroid receptor are predicted to disrupt normal growth, providing good candidates of new insecticides. A database of over 2 million compounds was subjected to a shape-based virtual screening cascade to identify novel nonsteroidal hits similar to the known EcR ligand ponasterone A. Testing revealed micromolar hits against two strains of insect cells. Docking experiments against EcR were used to support the predicted binding mode of these ligands based on their overlay to ponasterone A.</description><identifier>ISSN: 1549-9596</identifier><identifier>EISSN: 1549-960X</identifier><identifier>DOI: 10.1021/ci100400k</identifier><identifier>PMID: 21275397</identifier><language>eng</language><publisher>Washington, DC: American Chemical Society</publisher><subject>Amino Acid Sequence ; Animals ; Binding sites ; Biochemistry ; Biological and medical sciences ; Cell Line ; Cells ; Chemistry ; Computational Biology ; Computational Chemistry ; Databases, Factual ; Drosophila melanogaster - genetics ; Drug Design ; Drug Evaluation, Preclinical - methods ; Ecdysone - agonists ; Ecdysone - metabolism ; Ecdysterone - analogs & derivatives ; Ecdysterone - chemistry ; Ecdysterone - metabolism ; Ecdysterone - pharmacology ; Exact sciences and technology ; General and physical chemistry ; General pharmacology ; General. Nomenclature, chemical documentation, computer chemistry ; Genes, Reporter - genetics ; HSP27 Heat-Shock Proteins - genetics ; Insect Proteins - chemistry ; Insect Proteins - metabolism ; Insecticides ; Insects ; Ligands ; Medical sciences ; Models, Molecular ; Molecular Sequence Data ; Molecules ; Pharmaceutical technology. Pharmaceutical industry ; Pharmacology. Drug treatments ; Protein Conformation ; Proteins ; Receptors, Steroid - chemistry ; Receptors, Steroid - metabolism ; Reproducibility of Results ; Spodoptera ; Theory of reactions, general kinetics. Catalysis. Nomenclature, chemical documentation, computer chemistry ; User-Computer Interface</subject><ispartof>Journal of chemical information and modeling, 2011-02, Vol.51 (2), p.296-305</ispartof><rights>Copyright © 2011 American Chemical Society</rights><rights>2015 INIST-CNRS</rights><rights>Copyright American Chemical Society Feb 28, 2011</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a437t-ad950243fd5b9cae57e0e7ab9911b98ff41ab0625486584d02d4d77168b763133</citedby><cites>FETCH-LOGICAL-a437t-ad950243fd5b9cae57e0e7ab9911b98ff41ab0625486584d02d4d77168b763133</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24332673$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21275397$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Harada, Toshiyuki</creatorcontrib><creatorcontrib>Nakagawa, Yoshiaki</creatorcontrib><creatorcontrib>Ogura, Takehiko</creatorcontrib><creatorcontrib>Yamada, Yutaka</creatorcontrib><creatorcontrib>Ohe, Takehiro</creatorcontrib><creatorcontrib>Miyagawa, Hisashi</creatorcontrib><title>Virtual Screening for Ligands of the Insect Molting Hormone Receptor</title><title>Journal of chemical information and modeling</title><addtitle>J. Chem. Inf. Model</addtitle><description>Insect growth is regulated by the orchestrated event of ecdysteroids and their receptor proteins. Agonists/antagonists of ecdysteroid receptor are predicted to disrupt normal growth, providing good candidates of new insecticides. A database of over 2 million compounds was subjected to a shape-based virtual screening cascade to identify novel nonsteroidal hits similar to the known EcR ligand ponasterone A. Testing revealed micromolar hits against two strains of insect cells. Docking experiments against EcR were used to support the predicted binding mode of these ligands based on their overlay to ponasterone A.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Binding sites</subject><subject>Biochemistry</subject><subject>Biological and medical sciences</subject><subject>Cell Line</subject><subject>Cells</subject><subject>Chemistry</subject><subject>Computational Biology</subject><subject>Computational Chemistry</subject><subject>Databases, Factual</subject><subject>Drosophila melanogaster - genetics</subject><subject>Drug Design</subject><subject>Drug Evaluation, Preclinical - methods</subject><subject>Ecdysone - agonists</subject><subject>Ecdysone - metabolism</subject><subject>Ecdysterone - analogs & derivatives</subject><subject>Ecdysterone - chemistry</subject><subject>Ecdysterone - metabolism</subject><subject>Ecdysterone - pharmacology</subject><subject>Exact sciences and technology</subject><subject>General and physical chemistry</subject><subject>General pharmacology</subject><subject>General. Nomenclature, chemical documentation, computer chemistry</subject><subject>Genes, Reporter - genetics</subject><subject>HSP27 Heat-Shock Proteins - genetics</subject><subject>Insect Proteins - chemistry</subject><subject>Insect Proteins - metabolism</subject><subject>Insecticides</subject><subject>Insects</subject><subject>Ligands</subject><subject>Medical sciences</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Molecules</subject><subject>Pharmaceutical technology. Pharmaceutical industry</subject><subject>Pharmacology. Drug treatments</subject><subject>Protein Conformation</subject><subject>Proteins</subject><subject>Receptors, Steroid - chemistry</subject><subject>Receptors, Steroid - metabolism</subject><subject>Reproducibility of Results</subject><subject>Spodoptera</subject><subject>Theory of reactions, general kinetics. Catalysis. Nomenclature, chemical documentation, computer chemistry</subject><subject>User-Computer Interface</subject><issn>1549-9596</issn><issn>1549-960X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNpl0MtKAzEUBuAgitXqwheQIIi4GM09k6XUSwsVwRvuhkwmU6dOk5rMLHx7p_QGujpn8fGfww_ACUZXGBF8bSqMEEPoawccYM5UogT62F3vXIkeOIxxihClSpB90COYSE6VPAC371VoWl3DFxOsdZWbwNIHOK4m2hUR-hI2nxaOXLSmgY--bhZi6MPMOwufrbHzxocjsFfqOtrj1eyDt_u718EwGT89jAY340QzKptEF4ojwmhZ8FwZbbm0yEqdK4VxrtKyZFjnSBDOUsFTViBSsEJKLNJcCoop7YOLZe48-O_WxiabVdHYutbO-jZmKe_uKMJUJ8_-yKlvg-ue65BAlEuaduhyiUzwMQZbZvNQzXT4yTDKFsVmm2I7e7oKbPOZLTZy3WQHzldAR6PrMmhnqrh1jFIiJN06beL2qf8HfwFwJYmS</recordid><startdate>20110228</startdate><enddate>20110228</enddate><creator>Harada, Toshiyuki</creator><creator>Nakagawa, Yoshiaki</creator><creator>Ogura, Takehiko</creator><creator>Yamada, Yutaka</creator><creator>Ohe, Takehiro</creator><creator>Miyagawa, Hisashi</creator><general>American Chemical Society</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SC</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>JQ2</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>7X8</scope></search><sort><creationdate>20110228</creationdate><title>Virtual Screening for Ligands of the Insect Molting Hormone Receptor</title><author>Harada, Toshiyuki ; Nakagawa, Yoshiaki ; Ogura, Takehiko ; Yamada, Yutaka ; Ohe, Takehiro ; Miyagawa, Hisashi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a437t-ad950243fd5b9cae57e0e7ab9911b98ff41ab0625486584d02d4d77168b763133</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Binding sites</topic><topic>Biochemistry</topic><topic>Biological and medical sciences</topic><topic>Cell Line</topic><topic>Cells</topic><topic>Chemistry</topic><topic>Computational Biology</topic><topic>Computational Chemistry</topic><topic>Databases, Factual</topic><topic>Drosophila melanogaster - genetics</topic><topic>Drug Design</topic><topic>Drug Evaluation, Preclinical - methods</topic><topic>Ecdysone - agonists</topic><topic>Ecdysone - metabolism</topic><topic>Ecdysterone - analogs & derivatives</topic><topic>Ecdysterone - chemistry</topic><topic>Ecdysterone - metabolism</topic><topic>Ecdysterone - pharmacology</topic><topic>Exact sciences and technology</topic><topic>General and physical chemistry</topic><topic>General pharmacology</topic><topic>General. Nomenclature, chemical documentation, computer chemistry</topic><topic>Genes, Reporter - genetics</topic><topic>HSP27 Heat-Shock Proteins - genetics</topic><topic>Insect Proteins - chemistry</topic><topic>Insect Proteins - metabolism</topic><topic>Insecticides</topic><topic>Insects</topic><topic>Ligands</topic><topic>Medical sciences</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>Molecules</topic><topic>Pharmaceutical technology. Pharmaceutical industry</topic><topic>Pharmacology. Drug treatments</topic><topic>Protein Conformation</topic><topic>Proteins</topic><topic>Receptors, Steroid - chemistry</topic><topic>Receptors, Steroid - metabolism</topic><topic>Reproducibility of Results</topic><topic>Spodoptera</topic><topic>Theory of reactions, general kinetics. Catalysis. Nomenclature, chemical documentation, computer chemistry</topic><topic>User-Computer Interface</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Harada, Toshiyuki</creatorcontrib><creatorcontrib>Nakagawa, Yoshiaki</creatorcontrib><creatorcontrib>Ogura, Takehiko</creatorcontrib><creatorcontrib>Yamada, Yutaka</creatorcontrib><creatorcontrib>Ohe, Takehiro</creatorcontrib><creatorcontrib>Miyagawa, Hisashi</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Computer and Information Systems Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of chemical information and modeling</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Harada, Toshiyuki</au><au>Nakagawa, Yoshiaki</au><au>Ogura, Takehiko</au><au>Yamada, Yutaka</au><au>Ohe, Takehiro</au><au>Miyagawa, Hisashi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Virtual Screening for Ligands of the Insect Molting Hormone Receptor</atitle><jtitle>Journal of chemical information and modeling</jtitle><addtitle>J. Chem. Inf. Model</addtitle><date>2011-02-28</date><risdate>2011</risdate><volume>51</volume><issue>2</issue><spage>296</spage><epage>305</epage><pages>296-305</pages><issn>1549-9596</issn><eissn>1549-960X</eissn><abstract>Insect growth is regulated by the orchestrated event of ecdysteroids and their receptor proteins. Agonists/antagonists of ecdysteroid receptor are predicted to disrupt normal growth, providing good candidates of new insecticides. A database of over 2 million compounds was subjected to a shape-based virtual screening cascade to identify novel nonsteroidal hits similar to the known EcR ligand ponasterone A. Testing revealed micromolar hits against two strains of insect cells. Docking experiments against EcR were used to support the predicted binding mode of these ligands based on their overlay to ponasterone A.</abstract><cop>Washington, DC</cop><pub>American Chemical Society</pub><pmid>21275397</pmid><doi>10.1021/ci100400k</doi><tpages>10</tpages></addata></record> |
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subjects | Amino Acid Sequence Animals Binding sites Biochemistry Biological and medical sciences Cell Line Cells Chemistry Computational Biology Computational Chemistry Databases, Factual Drosophila melanogaster - genetics Drug Design Drug Evaluation, Preclinical - methods Ecdysone - agonists Ecdysone - metabolism Ecdysterone - analogs & derivatives Ecdysterone - chemistry Ecdysterone - metabolism Ecdysterone - pharmacology Exact sciences and technology General and physical chemistry General pharmacology General. Nomenclature, chemical documentation, computer chemistry Genes, Reporter - genetics HSP27 Heat-Shock Proteins - genetics Insect Proteins - chemistry Insect Proteins - metabolism Insecticides Insects Ligands Medical sciences Models, Molecular Molecular Sequence Data Molecules Pharmaceutical technology. Pharmaceutical industry Pharmacology. Drug treatments Protein Conformation Proteins Receptors, Steroid - chemistry Receptors, Steroid - metabolism Reproducibility of Results Spodoptera Theory of reactions, general kinetics. Catalysis. Nomenclature, chemical documentation, computer chemistry User-Computer Interface |
title | Virtual Screening for Ligands of the Insect Molting Hormone Receptor |
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