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Association between SNPs in pre-miRNA and risk of chronic obstructive pulmonary disease
Chronic obstructive pulmonary disease (COPD) is characterized by irreversible airway obstruction and persistent chronic airway inflammation and is influenced by genetic and environmental factors. This study aimed to explore the genetic aspect of its initial occurrence. We conducted a case–control st...
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Published in: | Clinical biochemistry 2011-07, Vol.44 (10), p.813-816 |
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container_title | Clinical biochemistry |
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creator | Li, Li-Juan Gao, Lin-Bo Lv, Mei-Li Dong, Wei Su, Xiao-Wei Liang, Wei-Bo Zhang, Lin |
description | Chronic obstructive pulmonary disease (COPD) is characterized by irreversible airway obstruction and persistent chronic airway inflammation and is influenced by genetic and environmental factors. This study aimed to explore the genetic aspect of its initial occurrence.
We conducted a case–control study of 432 COPD patients and 511 control subjects frequency-matched in age and gender distribution. We genotyped three single nucleotide polymorphisms (SNPs) in pre-miRNAs using a PCR-RFLP assay and evaluated their relevance to COPD susceptibility.
We found that the TT genotype and T allele of miR-196a2 rs11614913 were significantly associated with a decreased risk for COPD, compared with the CC genotype and C allele. Similarly, the GG genotype and G allele of miR-499 rs3746444 were associated with a decreased risk for COPD, compared with the AA genotype and A allele.
These findings suggest that both rs11614913 and rs3746444 may be involved in susceptibility to COPD. |
doi_str_mv | 10.1016/j.clinbiochem.2011.04.021 |
format | article |
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We conducted a case–control study of 432 COPD patients and 511 control subjects frequency-matched in age and gender distribution. We genotyped three single nucleotide polymorphisms (SNPs) in pre-miRNAs using a PCR-RFLP assay and evaluated their relevance to COPD susceptibility.
We found that the TT genotype and T allele of miR-196a2 rs11614913 were significantly associated with a decreased risk for COPD, compared with the CC genotype and C allele. Similarly, the GG genotype and G allele of miR-499 rs3746444 were associated with a decreased risk for COPD, compared with the AA genotype and A allele.
These findings suggest that both rs11614913 and rs3746444 may be involved in susceptibility to COPD.</description><identifier>ISSN: 0009-9120</identifier><identifier>EISSN: 1873-2933</identifier><identifier>DOI: 10.1016/j.clinbiochem.2011.04.021</identifier><identifier>PMID: 21565178</identifier><language>eng</language><publisher>Amsterdam: Elsevier Inc</publisher><subject>Aged ; Biological and medical sciences ; Case-Control Studies ; Chronic obstructive pulmonary disease ; Chronic obstructive pulmonary disease, asthma ; Female ; Gene Frequency - genetics ; Genetic Association Studies ; Genetic polymorphism ; Genetic Predisposition to Disease ; Humans ; Investigative techniques, diagnostic techniques (general aspects) ; Male ; Medical sciences ; MicroRNAs - genetics ; Pneumology ; Polymorphism, Single Nucleotide - genetics ; Pre-miRNA ; Pulmonary Disease, Chronic Obstructive - genetics ; Risk Factors</subject><ispartof>Clinical biochemistry, 2011-07, Vol.44 (10), p.813-816</ispartof><rights>2011 The Canadian Society of Clinical Chemists</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2011 The Canadian Society of Clinical Chemists. Published by Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c406t-b97282ef31fd8b78c1366613c13258c973d1d144809acde2e79230992ca150453</citedby><cites>FETCH-LOGICAL-c406t-b97282ef31fd8b78c1366613c13258c973d1d144809acde2e79230992ca150453</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24335774$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21565178$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Li-Juan</creatorcontrib><creatorcontrib>Gao, Lin-Bo</creatorcontrib><creatorcontrib>Lv, Mei-Li</creatorcontrib><creatorcontrib>Dong, Wei</creatorcontrib><creatorcontrib>Su, Xiao-Wei</creatorcontrib><creatorcontrib>Liang, Wei-Bo</creatorcontrib><creatorcontrib>Zhang, Lin</creatorcontrib><title>Association between SNPs in pre-miRNA and risk of chronic obstructive pulmonary disease</title><title>Clinical biochemistry</title><addtitle>Clin Biochem</addtitle><description>Chronic obstructive pulmonary disease (COPD) is characterized by irreversible airway obstruction and persistent chronic airway inflammation and is influenced by genetic and environmental factors. This study aimed to explore the genetic aspect of its initial occurrence.
We conducted a case–control study of 432 COPD patients and 511 control subjects frequency-matched in age and gender distribution. We genotyped three single nucleotide polymorphisms (SNPs) in pre-miRNAs using a PCR-RFLP assay and evaluated their relevance to COPD susceptibility.
We found that the TT genotype and T allele of miR-196a2 rs11614913 were significantly associated with a decreased risk for COPD, compared with the CC genotype and C allele. Similarly, the GG genotype and G allele of miR-499 rs3746444 were associated with a decreased risk for COPD, compared with the AA genotype and A allele.
These findings suggest that both rs11614913 and rs3746444 may be involved in susceptibility to COPD.</description><subject>Aged</subject><subject>Biological and medical sciences</subject><subject>Case-Control Studies</subject><subject>Chronic obstructive pulmonary disease</subject><subject>Chronic obstructive pulmonary disease, asthma</subject><subject>Female</subject><subject>Gene Frequency - genetics</subject><subject>Genetic Association Studies</subject><subject>Genetic polymorphism</subject><subject>Genetic Predisposition to Disease</subject><subject>Humans</subject><subject>Investigative techniques, diagnostic techniques (general aspects)</subject><subject>Male</subject><subject>Medical sciences</subject><subject>MicroRNAs - genetics</subject><subject>Pneumology</subject><subject>Polymorphism, Single Nucleotide - genetics</subject><subject>Pre-miRNA</subject><subject>Pulmonary Disease, Chronic Obstructive - genetics</subject><subject>Risk Factors</subject><issn>0009-9120</issn><issn>1873-2933</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNqNkEtv1DAURi0EokPhLyCzQKwS_EpsL0cjXlLVIh5iaTn2jeohsQc7adV_j6sZHsuuPl3pfPdeHYReUdJSQvu3-9ZNIQ4huWuYW0YobYloCaOP0IYqyRumOX-MNoQQ3WjKyBl6Vsq-jkyo_ik6Y7TrOyrVBv3YlpJcsEtIEQ-w3AJE_PXyc8Eh4kOGZg5fLrfYRo9zKD9xGrG7zikGh9NQlry6JdwAPqzTnKLNd9iHArbAc_RktFOBF6c8R9_fv_u2-9hcXH34tNteNE6QfmkGLZliMHI6ejVI5Sjv-57ymqxTTkvuqadCKKKt88BAasaJ1sxZ2hHR8XP05rj3kNOvFcpi5lAcTJONkNZilKS6V4zJSuoj6XIqJcNoDjnM9WVDibnXavbmP63mXqshwlSttfvydGUdZvB_m388VuD1CbDF2WnMNrpQ_nGC805KUbndkYPq5CZANsUFiA58yOAW41N4wDu_ASaZmvQ</recordid><startdate>20110701</startdate><enddate>20110701</enddate><creator>Li, Li-Juan</creator><creator>Gao, Lin-Bo</creator><creator>Lv, Mei-Li</creator><creator>Dong, Wei</creator><creator>Su, Xiao-Wei</creator><creator>Liang, Wei-Bo</creator><creator>Zhang, Lin</creator><general>Elsevier Inc</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20110701</creationdate><title>Association between SNPs in pre-miRNA and risk of chronic obstructive pulmonary disease</title><author>Li, Li-Juan ; Gao, Lin-Bo ; Lv, Mei-Li ; Dong, Wei ; Su, Xiao-Wei ; Liang, Wei-Bo ; Zhang, Lin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c406t-b97282ef31fd8b78c1366613c13258c973d1d144809acde2e79230992ca150453</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Aged</topic><topic>Biological and medical sciences</topic><topic>Case-Control Studies</topic><topic>Chronic obstructive pulmonary disease</topic><topic>Chronic obstructive pulmonary disease, asthma</topic><topic>Female</topic><topic>Gene Frequency - genetics</topic><topic>Genetic Association Studies</topic><topic>Genetic polymorphism</topic><topic>Genetic Predisposition to Disease</topic><topic>Humans</topic><topic>Investigative techniques, diagnostic techniques (general aspects)</topic><topic>Male</topic><topic>Medical sciences</topic><topic>MicroRNAs - genetics</topic><topic>Pneumology</topic><topic>Polymorphism, Single Nucleotide - genetics</topic><topic>Pre-miRNA</topic><topic>Pulmonary Disease, Chronic Obstructive - genetics</topic><topic>Risk Factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Li-Juan</creatorcontrib><creatorcontrib>Gao, Lin-Bo</creatorcontrib><creatorcontrib>Lv, Mei-Li</creatorcontrib><creatorcontrib>Dong, Wei</creatorcontrib><creatorcontrib>Su, Xiao-Wei</creatorcontrib><creatorcontrib>Liang, Wei-Bo</creatorcontrib><creatorcontrib>Zhang, Lin</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Clinical biochemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Li, Li-Juan</au><au>Gao, Lin-Bo</au><au>Lv, Mei-Li</au><au>Dong, Wei</au><au>Su, Xiao-Wei</au><au>Liang, Wei-Bo</au><au>Zhang, Lin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Association between SNPs in pre-miRNA and risk of chronic obstructive pulmonary disease</atitle><jtitle>Clinical biochemistry</jtitle><addtitle>Clin Biochem</addtitle><date>2011-07-01</date><risdate>2011</risdate><volume>44</volume><issue>10</issue><spage>813</spage><epage>816</epage><pages>813-816</pages><issn>0009-9120</issn><eissn>1873-2933</eissn><abstract>Chronic obstructive pulmonary disease (COPD) is characterized by irreversible airway obstruction and persistent chronic airway inflammation and is influenced by genetic and environmental factors. This study aimed to explore the genetic aspect of its initial occurrence.
We conducted a case–control study of 432 COPD patients and 511 control subjects frequency-matched in age and gender distribution. We genotyped three single nucleotide polymorphisms (SNPs) in pre-miRNAs using a PCR-RFLP assay and evaluated their relevance to COPD susceptibility.
We found that the TT genotype and T allele of miR-196a2 rs11614913 were significantly associated with a decreased risk for COPD, compared with the CC genotype and C allele. Similarly, the GG genotype and G allele of miR-499 rs3746444 were associated with a decreased risk for COPD, compared with the AA genotype and A allele.
These findings suggest that both rs11614913 and rs3746444 may be involved in susceptibility to COPD.</abstract><cop>Amsterdam</cop><pub>Elsevier Inc</pub><pmid>21565178</pmid><doi>10.1016/j.clinbiochem.2011.04.021</doi><tpages>4</tpages></addata></record> |
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subjects | Aged Biological and medical sciences Case-Control Studies Chronic obstructive pulmonary disease Chronic obstructive pulmonary disease, asthma Female Gene Frequency - genetics Genetic Association Studies Genetic polymorphism Genetic Predisposition to Disease Humans Investigative techniques, diagnostic techniques (general aspects) Male Medical sciences MicroRNAs - genetics Pneumology Polymorphism, Single Nucleotide - genetics Pre-miRNA Pulmonary Disease, Chronic Obstructive - genetics Risk Factors |
title | Association between SNPs in pre-miRNA and risk of chronic obstructive pulmonary disease |
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