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Association of p53 codon 72 genetic polymorphism with the risk of ulcerative colitis in northern Iran

Purpose Ulcerative colitis (UC) is a chronic inflammatory condition of the large bowel of unknown etiology, characterized by the presence of bloody diarrhea and mucus associated with a negative stool culture for bacteria, ova, or parasites. The aim of this study was to investigate the association of...

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Published in:International journal of colorectal disease 2011-02, Vol.26 (2), p.235-238
Main Authors: Vaji, Salaheddin, Salehi, Zivar, Aminian, Keyvan
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Salehi, Zivar
Aminian, Keyvan
description Purpose Ulcerative colitis (UC) is a chronic inflammatory condition of the large bowel of unknown etiology, characterized by the presence of bloody diarrhea and mucus associated with a negative stool culture for bacteria, ova, or parasites. The aim of this study was to investigate the association of p53 codon 72 genetic polymorphism with the risk of UC in northern Iran. Methods We evaluated the association of the p53 codon 72 genetic polymorphism with UC in northern Iran. The genotype of 190 patients with UC (115 men, 75 women; mean age, 32 ± 8.6 years) and 220 healthy control subjects (123 men, 97 women; mean age, 33 ± 2.5 years) were compared. Genomic DNA was extracted from colonic bioptic tissues of patients and blood samples of healthy individuals. Genotypes and allele frequencies were determined in patients and controls using allele-specific PCR (AS-PCR). Results There were significant differences in the distribution of the polymorphism between the control subjects and the UC patients (P < 0.0001). Significantly increased frequencies of the Pro allele and the Pro/Pro genotype were observed in patients with UC compared with controls (Pro allele: P < 0.0001; odds ratio, 7.87; 95% confidence interval, 4.03-15.35; Pro/Pro: P < 0.0001; odds ratio, 35.21; 95% confidence interval, 12.56-98.73). Conclusion The p53 codon 72 genetic polymorphism is associated with UC in northern Iran.
doi_str_mv 10.1007/s00384-010-1021-7
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The aim of this study was to investigate the association of p53 codon 72 genetic polymorphism with the risk of UC in northern Iran. Methods We evaluated the association of the p53 codon 72 genetic polymorphism with UC in northern Iran. The genotype of 190 patients with UC (115 men, 75 women; mean age, 32 ± 8.6 years) and 220 healthy control subjects (123 men, 97 women; mean age, 33 ± 2.5 years) were compared. Genomic DNA was extracted from colonic bioptic tissues of patients and blood samples of healthy individuals. Genotypes and allele frequencies were determined in patients and controls using allele-specific PCR (AS-PCR). Results There were significant differences in the distribution of the polymorphism between the control subjects and the UC patients (P &lt; 0.0001). Significantly increased frequencies of the Pro allele and the Pro/Pro genotype were observed in patients with UC compared with controls (Pro allele: P &lt; 0.0001; odds ratio, 7.87; 95% confidence interval, 4.03-15.35; Pro/Pro: P &lt; 0.0001; odds ratio, 35.21; 95% confidence interval, 12.56-98.73). Conclusion The p53 codon 72 genetic polymorphism is associated with UC in northern Iran.</description><identifier>ISSN: 0179-1958</identifier><identifier>EISSN: 1432-1262</identifier><identifier>DOI: 10.1007/s00384-010-1021-7</identifier><identifier>PMID: 20669023</identifier><identifier>CODEN: IJCDE6</identifier><language>eng</language><publisher>Berlin/Heidelberg: Berlin/Heidelberg : Springer-Verlag</publisher><subject>Adolescent ; Adult ; Biological and medical sciences ; Case-Control Studies ; Codon ; Codon - genetics ; Codon 72 ; Colitis, Ulcerative - genetics ; Development and progression ; Diarrhea ; Electrophoresis, Agar Gel ; Ethylenediaminetetraacetic acid ; Female ; Gastroenterology ; Gastroenterology. Liver. Pancreas. Abdomen ; Gene Frequency - genetics ; Genetic aspects ; Genetic Association Studies ; Genetic polymorphisms ; Genetic Predisposition to Disease ; Genetic research ; Hepatology ; Humans ; Internal Medicine ; Iran ; Male ; Medical sciences ; Medicine ; Medicine &amp; Public Health ; Middle Aged ; Original Article ; Other diseases. Semiology ; p53 ; polymorphism ; Polymorphism, Single Nucleotide - genetics ; Proctology ; Stomach. Duodenum. Small intestine. Colon. Rectum. Anus ; Surgery ; Tumor proteins ; Tumor Suppressor Protein p53 - genetics ; Ulcerative colitis ; Young Adult</subject><ispartof>International journal of colorectal disease, 2011-02, Vol.26 (2), p.235-238</ispartof><rights>Springer-Verlag 2010</rights><rights>2015 INIST-CNRS</rights><rights>COPYRIGHT 2011 Springer</rights><rights>Springer-Verlag 2011</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c523t-493f97233f702bb8cfec84484cda37d0fa441e411ce60b3949531ba53d9211493</citedby><cites>FETCH-LOGICAL-c523t-493f97233f702bb8cfec84484cda37d0fa441e411ce60b3949531ba53d9211493</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=23839309$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20669023$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Vaji, Salaheddin</creatorcontrib><creatorcontrib>Salehi, Zivar</creatorcontrib><creatorcontrib>Aminian, Keyvan</creatorcontrib><title>Association of p53 codon 72 genetic polymorphism with the risk of ulcerative colitis in northern Iran</title><title>International journal of colorectal disease</title><addtitle>Int J Colorectal Dis</addtitle><addtitle>Int J Colorectal Dis</addtitle><description>Purpose Ulcerative colitis (UC) is a chronic inflammatory condition of the large bowel of unknown etiology, characterized by the presence of bloody diarrhea and mucus associated with a negative stool culture for bacteria, ova, or parasites. The aim of this study was to investigate the association of p53 codon 72 genetic polymorphism with the risk of UC in northern Iran. Methods We evaluated the association of the p53 codon 72 genetic polymorphism with UC in northern Iran. The genotype of 190 patients with UC (115 men, 75 women; mean age, 32 ± 8.6 years) and 220 healthy control subjects (123 men, 97 women; mean age, 33 ± 2.5 years) were compared. Genomic DNA was extracted from colonic bioptic tissues of patients and blood samples of healthy individuals. Genotypes and allele frequencies were determined in patients and controls using allele-specific PCR (AS-PCR). Results There were significant differences in the distribution of the polymorphism between the control subjects and the UC patients (P &lt; 0.0001). Significantly increased frequencies of the Pro allele and the Pro/Pro genotype were observed in patients with UC compared with controls (Pro allele: P &lt; 0.0001; odds ratio, 7.87; 95% confidence interval, 4.03-15.35; Pro/Pro: P &lt; 0.0001; odds ratio, 35.21; 95% confidence interval, 12.56-98.73). Conclusion The p53 codon 72 genetic polymorphism is associated with UC in northern Iran.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Biological and medical sciences</subject><subject>Case-Control Studies</subject><subject>Codon</subject><subject>Codon - genetics</subject><subject>Codon 72</subject><subject>Colitis, Ulcerative - genetics</subject><subject>Development and progression</subject><subject>Diarrhea</subject><subject>Electrophoresis, Agar Gel</subject><subject>Ethylenediaminetetraacetic acid</subject><subject>Female</subject><subject>Gastroenterology</subject><subject>Gastroenterology. Liver. Pancreas. Abdomen</subject><subject>Gene Frequency - genetics</subject><subject>Genetic aspects</subject><subject>Genetic Association Studies</subject><subject>Genetic polymorphisms</subject><subject>Genetic Predisposition to Disease</subject><subject>Genetic research</subject><subject>Hepatology</subject><subject>Humans</subject><subject>Internal Medicine</subject><subject>Iran</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Medicine</subject><subject>Medicine &amp; Public Health</subject><subject>Middle Aged</subject><subject>Original Article</subject><subject>Other diseases. Semiology</subject><subject>p53</subject><subject>polymorphism</subject><subject>Polymorphism, Single Nucleotide - genetics</subject><subject>Proctology</subject><subject>Stomach. Duodenum. Small intestine. Colon. Rectum. Anus</subject><subject>Surgery</subject><subject>Tumor proteins</subject><subject>Tumor Suppressor Protein p53 - genetics</subject><subject>Ulcerative colitis</subject><subject>Young Adult</subject><issn>0179-1958</issn><issn>1432-1262</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNqFkk2PFCEQhjtG446rP8CLEo3x1GsV0E1znGz82GQTD7pnwtAww9oNI_Ro9t9Lb49uNEbDgRQ8bxX1UlX1FOEMAcSbDMA6XgNCjUCxFveqFXJGa6QtvV-tAIWsUTbdSfUo52socSv4w-qEQttKoGxV2XXO0Xg9-RhIdGTfMGJiXwJBydYGO3lD9nG4GWPa73weyXc_7ci0syT5_GWWHAZjU0nwzRbl4CefiQ8kxFSgFMhF0uFx9cDpIdsnx_20unr39vP5h_ry4_uL8_VlbRrKpppL5qSgjDkBdLPpjLOm47zjptdM9OA052g5orEtbJjksmG40Q3rJUUs6tPq9ZJ3n-LXg82TGn02dhh0sPGQVSd4sYSz5v8kLwYx1kEhX_xBXsdDCqWNAjVCthzmwi8XaKsHq3xwcUrazCnVWiDnsjg_U2d_ocrq7ehNDNb5cv6bABeBSTHnZJ3aJz_qdKMQ1DwCahkBBbcxRSWK5tnxvYfNaPtfip9_XoBXR0BnowdX_sf4fMexjkl22xNduFyuwtamu8b_Vf35InI6Kr0tM6KuPlFABihpV9xiPwACTc5S</recordid><startdate>20110201</startdate><enddate>20110201</enddate><creator>Vaji, Salaheddin</creator><creator>Salehi, Zivar</creator><creator>Aminian, Keyvan</creator><general>Berlin/Heidelberg : Springer-Verlag</general><general>Springer-Verlag</general><general>Springer</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7T5</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>H94</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20110201</creationdate><title>Association of p53 codon 72 genetic polymorphism with the risk of ulcerative colitis in northern Iran</title><author>Vaji, Salaheddin ; Salehi, Zivar ; Aminian, Keyvan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c523t-493f97233f702bb8cfec84484cda37d0fa441e411ce60b3949531ba53d9211493</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Biological and medical sciences</topic><topic>Case-Control Studies</topic><topic>Codon</topic><topic>Codon - genetics</topic><topic>Codon 72</topic><topic>Colitis, Ulcerative - genetics</topic><topic>Development and progression</topic><topic>Diarrhea</topic><topic>Electrophoresis, Agar Gel</topic><topic>Ethylenediaminetetraacetic acid</topic><topic>Female</topic><topic>Gastroenterology</topic><topic>Gastroenterology. Liver. Pancreas. Abdomen</topic><topic>Gene Frequency - genetics</topic><topic>Genetic aspects</topic><topic>Genetic Association Studies</topic><topic>Genetic polymorphisms</topic><topic>Genetic Predisposition to Disease</topic><topic>Genetic research</topic><topic>Hepatology</topic><topic>Humans</topic><topic>Internal Medicine</topic><topic>Iran</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Medicine</topic><topic>Medicine &amp; Public Health</topic><topic>Middle Aged</topic><topic>Original Article</topic><topic>Other diseases. Semiology</topic><topic>p53</topic><topic>polymorphism</topic><topic>Polymorphism, Single Nucleotide - genetics</topic><topic>Proctology</topic><topic>Stomach. Duodenum. Small intestine. Colon. Rectum. Anus</topic><topic>Surgery</topic><topic>Tumor proteins</topic><topic>Tumor Suppressor Protein p53 - genetics</topic><topic>Ulcerative colitis</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Vaji, Salaheddin</creatorcontrib><creatorcontrib>Salehi, Zivar</creatorcontrib><creatorcontrib>Aminian, Keyvan</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Immunology Abstracts</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>International journal of colorectal disease</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Vaji, Salaheddin</au><au>Salehi, Zivar</au><au>Aminian, Keyvan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Association of p53 codon 72 genetic polymorphism with the risk of ulcerative colitis in northern Iran</atitle><jtitle>International journal of colorectal disease</jtitle><stitle>Int J Colorectal Dis</stitle><addtitle>Int J Colorectal Dis</addtitle><date>2011-02-01</date><risdate>2011</risdate><volume>26</volume><issue>2</issue><spage>235</spage><epage>238</epage><pages>235-238</pages><issn>0179-1958</issn><eissn>1432-1262</eissn><coden>IJCDE6</coden><abstract>Purpose Ulcerative colitis (UC) is a chronic inflammatory condition of the large bowel of unknown etiology, characterized by the presence of bloody diarrhea and mucus associated with a negative stool culture for bacteria, ova, or parasites. The aim of this study was to investigate the association of p53 codon 72 genetic polymorphism with the risk of UC in northern Iran. Methods We evaluated the association of the p53 codon 72 genetic polymorphism with UC in northern Iran. The genotype of 190 patients with UC (115 men, 75 women; mean age, 32 ± 8.6 years) and 220 healthy control subjects (123 men, 97 women; mean age, 33 ± 2.5 years) were compared. Genomic DNA was extracted from colonic bioptic tissues of patients and blood samples of healthy individuals. Genotypes and allele frequencies were determined in patients and controls using allele-specific PCR (AS-PCR). Results There were significant differences in the distribution of the polymorphism between the control subjects and the UC patients (P &lt; 0.0001). Significantly increased frequencies of the Pro allele and the Pro/Pro genotype were observed in patients with UC compared with controls (Pro allele: P &lt; 0.0001; odds ratio, 7.87; 95% confidence interval, 4.03-15.35; Pro/Pro: P &lt; 0.0001; odds ratio, 35.21; 95% confidence interval, 12.56-98.73). Conclusion The p53 codon 72 genetic polymorphism is associated with UC in northern Iran.</abstract><cop>Berlin/Heidelberg</cop><pub>Berlin/Heidelberg : Springer-Verlag</pub><pmid>20669023</pmid><doi>10.1007/s00384-010-1021-7</doi><tpages>4</tpages></addata></record>
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source Springer Nature
subjects Adolescent
Adult
Biological and medical sciences
Case-Control Studies
Codon
Codon - genetics
Codon 72
Colitis, Ulcerative - genetics
Development and progression
Diarrhea
Electrophoresis, Agar Gel
Ethylenediaminetetraacetic acid
Female
Gastroenterology
Gastroenterology. Liver. Pancreas. Abdomen
Gene Frequency - genetics
Genetic aspects
Genetic Association Studies
Genetic polymorphisms
Genetic Predisposition to Disease
Genetic research
Hepatology
Humans
Internal Medicine
Iran
Male
Medical sciences
Medicine
Medicine & Public Health
Middle Aged
Original Article
Other diseases. Semiology
p53
polymorphism
Polymorphism, Single Nucleotide - genetics
Proctology
Stomach. Duodenum. Small intestine. Colon. Rectum. Anus
Surgery
Tumor proteins
Tumor Suppressor Protein p53 - genetics
Ulcerative colitis
Young Adult
title Association of p53 codon 72 genetic polymorphism with the risk of ulcerative colitis in northern Iran
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