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Candida uthaithanina sp. nov., an anamorphic yeast species in Nakaseomyces clade isolated in Thailand
Three yeast stains were isolated from two unknown fruits (strains DD2-22-1 T and SK44) and moss (strain ST-449) in Thailand. Analysis of the D1/D2 domain of the large subunit (LSU) rRNA gene sequences of the three strains revealed that they belonged to the same species. In terms of pairwise sequence...
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| Published in: | Antonie van Leeuwenhoek 2011-05, Vol.99 (4), p.865-871 |
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| Main Authors: | , , , , , , |
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| cites | cdi_FETCH-LOGICAL-c498t-8ab24c587fbefa2862d987cf14bd030e52637a1c91eb463a370521a73418ec5a3 |
| container_end_page | 871 |
| container_issue | 4 |
| container_start_page | 865 |
| container_title | Antonie van Leeuwenhoek |
| container_volume | 99 |
| creator | Limtong, Savitree Jindamorakot, Sasitorn Am-In, Somjit Kaewwichian, Rungluk Nitiyon, Sukanya Yongmanitchai, Wichien Nakase, Takashi |
| description | Three yeast stains were isolated from two unknown fruits (strains DD2-22-1
T
and SK44) and moss (strain ST-449) in Thailand. Analysis of the D1/D2 domain of the large subunit (LSU) rRNA gene sequences of the three strains revealed that they belonged to the same species. In terms of pairwise sequence similarity,
Candida
cf.
glabrata
UWO(PS) 98–110.4 and
Candida nivariensis
were the closest undescribed and recognized taxa, but the levels of nucleotide substitutions were 1.7–1.9% and 2.0–2.2%, respectively. The levels of nucleotide substitutions were sufficient to justify the description of a separate species of
Candida
. In the phylogenetic tree based on the D1/D2 domain of the LSU rRNA gene the three strains were placed in a separate branch in the
Nakaseomyces
clade with
C
. cf.
glabrata
UWO(PS)98-110.4,
C
.
nivariensis
,
Candida
glabrata
,
Candida bracarensis
,
Candida kungkrabaensis
and
Nakaseomyces delphensis
. Phenotypic characteristics of the three strains were similar which included proliferation by multilateral budding, absence of ascospores, arthrospores or ballistospores; negative for Diazonium blue B and urease tests. The major ubiquinone was Q-6. On the basis of the above findings, the three strains were assigned to a single novel species of
Candida,
for which the name
Candida uthaithanina
sp. nov is proposed. The type strain is DD2-22-1
T
(= BCC 29899
T
= NBRC 104876
T
= CBS 10932
T
). |
| doi_str_mv | 10.1007/s10482-011-9561-6 |
| format | article |
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T
and SK44) and moss (strain ST-449) in Thailand. Analysis of the D1/D2 domain of the large subunit (LSU) rRNA gene sequences of the three strains revealed that they belonged to the same species. In terms of pairwise sequence similarity,
Candida
cf.
glabrata
UWO(PS) 98–110.4 and
Candida nivariensis
were the closest undescribed and recognized taxa, but the levels of nucleotide substitutions were 1.7–1.9% and 2.0–2.2%, respectively. The levels of nucleotide substitutions were sufficient to justify the description of a separate species of
Candida
. In the phylogenetic tree based on the D1/D2 domain of the LSU rRNA gene the three strains were placed in a separate branch in the
Nakaseomyces
clade with
C
. cf.
glabrata
UWO(PS)98-110.4,
C
.
nivariensis
,
Candida
glabrata
,
Candida bracarensis
,
Candida kungkrabaensis
and
Nakaseomyces delphensis
. Phenotypic characteristics of the three strains were similar which included proliferation by multilateral budding, absence of ascospores, arthrospores or ballistospores; negative for Diazonium blue B and urease tests. The major ubiquinone was Q-6. On the basis of the above findings, the three strains were assigned to a single novel species of
Candida,
for which the name
Candida uthaithanina
sp. nov is proposed. The type strain is DD2-22-1
T
(= BCC 29899
T
= NBRC 104876
T
= CBS 10932
T
).</description><identifier>ISSN: 0003-6072</identifier><identifier>EISSN: 1572-9699</identifier><identifier>DOI: 10.1007/s10482-011-9561-6</identifier><identifier>PMID: 21311971</identifier><identifier>CODEN: ANLEDR</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Arthrospores ; Ascospores ; Biological and medical sciences ; Biomedical and Life Sciences ; Budding ; Candida ; Candida - genetics ; Candida - isolation & purification ; Candida glabrata ; DNA, Fungal - analysis ; DNA, Fungal - genetics ; DNA, Ribosomal - analysis ; DNA, Ribosomal - genetics ; Fruit - microbiology ; Fruits ; Fundamental and applied biological sciences. Psychology ; Genetics ; Life Sciences ; Medical Microbiology ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; Molecular Typing ; Mosses ; Mycological Typing Techniques ; Mycology ; New species ; Nucleotides ; Original Paper ; Phenotype ; Phylogeny ; Plant Sciences ; rRNA ; Sequence Analysis, DNA ; Soil Science & Conservation ; Stains ; Taxonomy ; Thailand ; ubiquinone ; Urease ; Yeast ; Yeasts</subject><ispartof>Antonie van Leeuwenhoek, 2011-05, Vol.99 (4), p.865-871</ispartof><rights>Springer Science+Business Media B.V. 2011</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c498t-8ab24c587fbefa2862d987cf14bd030e52637a1c91eb463a370521a73418ec5a3</citedby><cites>FETCH-LOGICAL-c498t-8ab24c587fbefa2862d987cf14bd030e52637a1c91eb463a370521a73418ec5a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24107681$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21311971$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Limtong, Savitree</creatorcontrib><creatorcontrib>Jindamorakot, Sasitorn</creatorcontrib><creatorcontrib>Am-In, Somjit</creatorcontrib><creatorcontrib>Kaewwichian, Rungluk</creatorcontrib><creatorcontrib>Nitiyon, Sukanya</creatorcontrib><creatorcontrib>Yongmanitchai, Wichien</creatorcontrib><creatorcontrib>Nakase, Takashi</creatorcontrib><title>Candida uthaithanina sp. nov., an anamorphic yeast species in Nakaseomyces clade isolated in Thailand</title><title>Antonie van Leeuwenhoek</title><addtitle>Antonie van Leeuwenhoek</addtitle><addtitle>Antonie Van Leeuwenhoek</addtitle><description>Three yeast stains were isolated from two unknown fruits (strains DD2-22-1
T
and SK44) and moss (strain ST-449) in Thailand. Analysis of the D1/D2 domain of the large subunit (LSU) rRNA gene sequences of the three strains revealed that they belonged to the same species. In terms of pairwise sequence similarity,
Candida
cf.
glabrata
UWO(PS) 98–110.4 and
Candida nivariensis
were the closest undescribed and recognized taxa, but the levels of nucleotide substitutions were 1.7–1.9% and 2.0–2.2%, respectively. The levels of nucleotide substitutions were sufficient to justify the description of a separate species of
Candida
. In the phylogenetic tree based on the D1/D2 domain of the LSU rRNA gene the three strains were placed in a separate branch in the
Nakaseomyces
clade with
C
. cf.
glabrata
UWO(PS)98-110.4,
C
.
nivariensis
,
Candida
glabrata
,
Candida bracarensis
,
Candida kungkrabaensis
and
Nakaseomyces delphensis
. Phenotypic characteristics of the three strains were similar which included proliferation by multilateral budding, absence of ascospores, arthrospores or ballistospores; negative for Diazonium blue B and urease tests. The major ubiquinone was Q-6. On the basis of the above findings, the three strains were assigned to a single novel species of
Candida,
for which the name
Candida uthaithanina
sp. nov is proposed. The type strain is DD2-22-1
T
(= BCC 29899
T
= NBRC 104876
T
= CBS 10932
T
).</description><subject>Arthrospores</subject><subject>Ascospores</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Budding</subject><subject>Candida</subject><subject>Candida - genetics</subject><subject>Candida - isolation & purification</subject><subject>Candida glabrata</subject><subject>DNA, Fungal - analysis</subject><subject>DNA, Fungal - genetics</subject><subject>DNA, Ribosomal - analysis</subject><subject>DNA, Ribosomal - genetics</subject><subject>Fruit - microbiology</subject><subject>Fruits</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetics</subject><subject>Life Sciences</subject><subject>Medical Microbiology</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>Molecular Typing</subject><subject>Mosses</subject><subject>Mycological Typing Techniques</subject><subject>Mycology</subject><subject>New species</subject><subject>Nucleotides</subject><subject>Original Paper</subject><subject>Phenotype</subject><subject>Phylogeny</subject><subject>Plant Sciences</subject><subject>rRNA</subject><subject>Sequence Analysis, DNA</subject><subject>Soil Science & Conservation</subject><subject>Stains</subject><subject>Taxonomy</subject><subject>Thailand</subject><subject>ubiquinone</subject><subject>Urease</subject><subject>Yeast</subject><subject>Yeasts</subject><issn>0003-6072</issn><issn>1572-9699</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNqFkU2LFDEQhoO4uOPqD_AijSBe7DGVpPNxXAY_Fha9rOdQnU67WbvTY9ItzL_fNDO6IMhCQijqqbeq8hLyCugWKFUfMlChWU0BatNIqOUTsoFGsdpIY56SDaWU15Iqdk6e53xXQiO1ekbOGXAAo2BD_A5jFzqslvkWQ7kxRKzyflvF6ff2fYWxHByntL8Nrjp4zHPJehd8rkKsvuJPzH4aD67EbsDOVyFPA86-W9M3RXMoDV6Qsx6H7F-e3gvy_dPHm92X-vrb56vd5XXthNFzrbFlwjVa9a3vkWnJOqOV60G0HeXUN0xyheAM-FZIjlzRhgEqLkB71yC_IO-Ouvs0_Vp8nu0YsvNDmcFPS7ZaSca1BvU4KZnSRja0kG_-Ie-mJcWyxgoJVr5XFAiOkEtTzsn3dp_CiOlggdrVK3v0yhav7OqVlaXm9Ul4aUff_a34Y04B3p4AzA6HPmF0IT9wAqiSeuXYkcslFX_49DDh_7vfA5SBqmQ</recordid><startdate>20110501</startdate><enddate>20110501</enddate><creator>Limtong, Savitree</creator><creator>Jindamorakot, Sasitorn</creator><creator>Am-In, Somjit</creator><creator>Kaewwichian, Rungluk</creator><creator>Nitiyon, Sukanya</creator><creator>Yongmanitchai, Wichien</creator><creator>Nakase, Takashi</creator><general>Springer Netherlands</general><general>Springer</general><general>Springer Nature B.V</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope></search><sort><creationdate>20110501</creationdate><title>Candida uthaithanina sp. nov., an anamorphic yeast species in Nakaseomyces clade isolated in Thailand</title><author>Limtong, Savitree ; Jindamorakot, Sasitorn ; Am-In, Somjit ; Kaewwichian, Rungluk ; Nitiyon, Sukanya ; Yongmanitchai, Wichien ; Nakase, Takashi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c498t-8ab24c587fbefa2862d987cf14bd030e52637a1c91eb463a370521a73418ec5a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Arthrospores</topic><topic>Ascospores</topic><topic>Biological and medical sciences</topic><topic>Biomedical and Life Sciences</topic><topic>Budding</topic><topic>Candida</topic><topic>Candida - genetics</topic><topic>Candida - isolation & purification</topic><topic>Candida glabrata</topic><topic>DNA, Fungal - analysis</topic><topic>DNA, Fungal - genetics</topic><topic>DNA, Ribosomal - analysis</topic><topic>DNA, Ribosomal - genetics</topic><topic>Fruit - microbiology</topic><topic>Fruits</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genetics</topic><topic>Life Sciences</topic><topic>Medical Microbiology</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>Molecular Typing</topic><topic>Mosses</topic><topic>Mycological Typing Techniques</topic><topic>Mycology</topic><topic>New species</topic><topic>Nucleotides</topic><topic>Original Paper</topic><topic>Phenotype</topic><topic>Phylogeny</topic><topic>Plant Sciences</topic><topic>rRNA</topic><topic>Sequence Analysis, DNA</topic><topic>Soil Science & Conservation</topic><topic>Stains</topic><topic>Taxonomy</topic><topic>Thailand</topic><topic>ubiquinone</topic><topic>Urease</topic><topic>Yeast</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Limtong, Savitree</creatorcontrib><creatorcontrib>Jindamorakot, Sasitorn</creatorcontrib><creatorcontrib>Am-In, Somjit</creatorcontrib><creatorcontrib>Kaewwichian, Rungluk</creatorcontrib><creatorcontrib>Nitiyon, Sukanya</creatorcontrib><creatorcontrib>Yongmanitchai, Wichien</creatorcontrib><creatorcontrib>Nakase, Takashi</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Antonie van Leeuwenhoek</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Limtong, Savitree</au><au>Jindamorakot, Sasitorn</au><au>Am-In, Somjit</au><au>Kaewwichian, Rungluk</au><au>Nitiyon, Sukanya</au><au>Yongmanitchai, Wichien</au><au>Nakase, Takashi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Candida uthaithanina sp. nov., an anamorphic yeast species in Nakaseomyces clade isolated in Thailand</atitle><jtitle>Antonie van Leeuwenhoek</jtitle><stitle>Antonie van Leeuwenhoek</stitle><addtitle>Antonie Van Leeuwenhoek</addtitle><date>2011-05-01</date><risdate>2011</risdate><volume>99</volume><issue>4</issue><spage>865</spage><epage>871</epage><pages>865-871</pages><issn>0003-6072</issn><eissn>1572-9699</eissn><coden>ANLEDR</coden><abstract>Three yeast stains were isolated from two unknown fruits (strains DD2-22-1
T
and SK44) and moss (strain ST-449) in Thailand. Analysis of the D1/D2 domain of the large subunit (LSU) rRNA gene sequences of the three strains revealed that they belonged to the same species. In terms of pairwise sequence similarity,
Candida
cf.
glabrata
UWO(PS) 98–110.4 and
Candida nivariensis
were the closest undescribed and recognized taxa, but the levels of nucleotide substitutions were 1.7–1.9% and 2.0–2.2%, respectively. The levels of nucleotide substitutions were sufficient to justify the description of a separate species of
Candida
. In the phylogenetic tree based on the D1/D2 domain of the LSU rRNA gene the three strains were placed in a separate branch in the
Nakaseomyces
clade with
C
. cf.
glabrata
UWO(PS)98-110.4,
C
.
nivariensis
,
Candida
glabrata
,
Candida bracarensis
,
Candida kungkrabaensis
and
Nakaseomyces delphensis
. Phenotypic characteristics of the three strains were similar which included proliferation by multilateral budding, absence of ascospores, arthrospores or ballistospores; negative for Diazonium blue B and urease tests. The major ubiquinone was Q-6. On the basis of the above findings, the three strains were assigned to a single novel species of
Candida,
for which the name
Candida uthaithanina
sp. nov is proposed. The type strain is DD2-22-1
T
(= BCC 29899
T
= NBRC 104876
T
= CBS 10932
T
).</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>21311971</pmid><doi>10.1007/s10482-011-9561-6</doi><tpages>7</tpages></addata></record> |
| fulltext | fulltext |
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| ispartof | Antonie van Leeuwenhoek, 2011-05, Vol.99 (4), p.865-871 |
| issn | 0003-6072 1572-9699 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_876238817 |
| source | Springer Link |
| subjects | Arthrospores Ascospores Biological and medical sciences Biomedical and Life Sciences Budding Candida Candida - genetics Candida - isolation & purification Candida glabrata DNA, Fungal - analysis DNA, Fungal - genetics DNA, Ribosomal - analysis DNA, Ribosomal - genetics Fruit - microbiology Fruits Fundamental and applied biological sciences. Psychology Genetics Life Sciences Medical Microbiology Microbiology Miscellaneous Molecular Sequence Data Molecular Typing Mosses Mycological Typing Techniques Mycology New species Nucleotides Original Paper Phenotype Phylogeny Plant Sciences rRNA Sequence Analysis, DNA Soil Science & Conservation Stains Taxonomy Thailand ubiquinone Urease Yeast Yeasts |
| title | Candida uthaithanina sp. nov., an anamorphic yeast species in Nakaseomyces clade isolated in Thailand |
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