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Ascorbate peroxidase-related (APx-R) is a new heme-containing protein functionally associated with ascorbate peroxidase but evolutionarily divergent

• Peroxidases are involved in several important processes, such as development and responses to environmental cues. In higher plants, most peroxidases are encoded by large, multigenic families that mainly originated from gene and chromosomal duplications. • Using phylogenetic, genomic and functional...

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Published in:The New phytologist 2011-07, Vol.191 (1), p.234-250
Main Authors: Lazzarotto, Fernanda, Teixeira, Felipe Karam, Rosa, Silvia Barcelos, Dunand, Christophe, Fernandes, Claudia Lemelle, de Vasconcelos Fontenele, Adilton, Silveira, Joaquim Albenisio Gomes, Verli, Hugo, Margis, Rogério, Margis-Pinheiro, Marcia
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cited_by cdi_FETCH-LOGICAL-c4929-3fb4c757bfabab7462573b1f2c505bfccf6e6c5f628c1d9a7fb293bf901216e3
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container_title The New phytologist
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creator Lazzarotto, Fernanda
Teixeira, Felipe Karam
Rosa, Silvia Barcelos
Dunand, Christophe
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de Vasconcelos Fontenele, Adilton
Silveira, Joaquim Albenisio Gomes
Verli, Hugo
Margis, Rogério
Margis-Pinheiro, Marcia
description • Peroxidases are involved in several important processes, such as development and responses to environmental cues. In higher plants, most peroxidases are encoded by large, multigenic families that mainly originated from gene and chromosomal duplications. • Using phylogenetic, genomic and functional analyses, we have identified and characterized a new class of putative heme peroxidases, called ascorbate peroxidase-related (APx-R), which arose specifically in the lineage of plants. • The APx-R protein is structurally related to the ascorbate peroxidases, although the active site contains many conserved substitutions. Unlike all other plant peroxidases, which are encoded by gene families, APx-R is encoded by a single-copy gene in virtually all the species analyzed. APx-R proteins are targeted to the chloroplast and can physically interact with chloroplastic APx proteins. APx-R-knockdown rice (Oryza sativa) plants presented delayed development and a disturbed steady state of the antioxidant system compared with wild type. Moreover, the accumulation of APx-R transcripts was modulated by drought, UV irradiation, cold, and aluminum exposure in rice, suggesting the involvement of APx-R in the environmental stress response. • Our results reveal the existence of a new class of heme peroxidase which seems to play a role in the antioxidant system in plants, probably by modulating the activity of chloroplastic APx proteins.
doi_str_mv 10.1111/j.1469-8137.2011.03659.x
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In higher plants, most peroxidases are encoded by large, multigenic families that mainly originated from gene and chromosomal duplications. • Using phylogenetic, genomic and functional analyses, we have identified and characterized a new class of putative heme peroxidases, called ascorbate peroxidase-related (APx-R), which arose specifically in the lineage of plants. • The APx-R protein is structurally related to the ascorbate peroxidases, although the active site contains many conserved substitutions. Unlike all other plant peroxidases, which are encoded by gene families, APx-R is encoded by a single-copy gene in virtually all the species analyzed. APx-R proteins are targeted to the chloroplast and can physically interact with chloroplastic APx proteins. APx-R-knockdown rice (Oryza sativa) plants presented delayed development and a disturbed steady state of the antioxidant system compared with wild type. Moreover, the accumulation of APx-R transcripts was modulated by drought, UV irradiation, cold, and aluminum exposure in rice, suggesting the involvement of APx-R in the environmental stress response. • Our results reveal the existence of a new class of heme peroxidase which seems to play a role in the antioxidant system in plants, probably by modulating the activity of chloroplastic APx proteins.</description><identifier>ISSN: 0028-646X</identifier><identifier>EISSN: 1469-8137</identifier><identifier>DOI: 10.1111/j.1469-8137.2011.03659.x</identifier><identifier>PMID: 21352234</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Aluminium ; Aluminum ; Amino Acid Sequence ; antioxidant ; Antioxidants ; Antioxidants - metabolism ; Arabidopsis - genetics ; ascorbate peroxidase ; Ascorbate Peroxidases ; Ascorbic acid ; Catalytic Domain ; Chloroplasts ; Chloroplasts - enzymology ; Chromosomes ; cold ; Conserved Sequence ; Dimerization ; Divergence ; Drought ; Environmental stress ; Evolution, Molecular ; Gene families ; Genes ; Genetic loci ; Genomics ; H2O2 scavenging ; Heme ; heme peroxidase ; Irradiation ; L-Ascorbate peroxidase ; Mitochondria - enzymology ; Molecular Sequence Data ; New class ; New classes ; Oryza - enzymology ; Oryza - genetics ; Oryza - growth &amp; development ; Oryza sativa ; Peroxidase ; Peroxidases - chemistry ; Peroxidases - genetics ; Peroxidases - physiology ; Phylogenetics ; Phylogeny ; Plant interaction ; Plant Proteins - chemistry ; Plant Proteins - genetics ; Plant Proteins - physiology ; Plants ; Populus - genetics ; Protein isoforms ; Proteins ; redox ; Rice ; RNA, Messenger - metabolism ; Sequence Alignment ; single copy gene ; stress response ; Stress, Physiological ; Ultraviolet radiation</subject><ispartof>The New phytologist, 2011-07, Vol.191 (1), p.234-250</ispartof><rights>Copyright © 2011 New Phytologist Trust</rights><rights>2011 The Authors. 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subjects Aluminium
Aluminum
Amino Acid Sequence
antioxidant
Antioxidants
Antioxidants - metabolism
Arabidopsis - genetics
ascorbate peroxidase
Ascorbate Peroxidases
Ascorbic acid
Catalytic Domain
Chloroplasts
Chloroplasts - enzymology
Chromosomes
cold
Conserved Sequence
Dimerization
Divergence
Drought
Environmental stress
Evolution, Molecular
Gene families
Genes
Genetic loci
Genomics
H2O2 scavenging
Heme
heme peroxidase
Irradiation
L-Ascorbate peroxidase
Mitochondria - enzymology
Molecular Sequence Data
New class
New classes
Oryza - enzymology
Oryza - genetics
Oryza - growth & development
Oryza sativa
Peroxidase
Peroxidases - chemistry
Peroxidases - genetics
Peroxidases - physiology
Phylogenetics
Phylogeny
Plant interaction
Plant Proteins - chemistry
Plant Proteins - genetics
Plant Proteins - physiology
Plants
Populus - genetics
Protein isoforms
Proteins
redox
Rice
RNA, Messenger - metabolism
Sequence Alignment
single copy gene
stress response
Stress, Physiological
Ultraviolet radiation
title Ascorbate peroxidase-related (APx-R) is a new heme-containing protein functionally associated with ascorbate peroxidase but evolutionarily divergent
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