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Quantification of total and specific gram-negative histamine-producing bacteria species in fish using an MPN real-time PCR method
Quantification of histamine-producing bacteria (HPB) is necessary in order to elucidate the role that HPB play in scombrotoxin (histamine) fish poisoning. We report here the evaluation of a real-time PCR method for the quantification of total and specific Gram-negative HPB species in fish using a mo...
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Published in: | Food microbiology 2011-10, Vol.28 (7), p.1284-1292 |
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description | Quantification of histamine-producing bacteria (HPB) is necessary in order to elucidate the role that HPB play in scombrotoxin (histamine) fish poisoning. We report here the evaluation of a real-time PCR method for the quantification of total and specific Gram-negative HPB species in fish using a most probable number (MPN) format. The species-specific real-time PCR assay was 100% inclusive for independently detecting Morganella morganii, Enterobacter aerogenes, Raoultella planticola/ornithinolytica and Photobacterium damselae and did not cross react with other histamine- or non- histamine-producing bacteria. The efficiency of the reactions in the absence and presence of Spanish mackerel enrichment containing 1 × 106 CFU/ml of background microflora were 93–104 and 92–99%, respectively. The MPN-real-time PCR assay accurately quantified total and specific HPB in spiked mahi–mahi (Coryphaena hippurus) and Spanish mackerel (Scomberomorus maculates) samples. These methods were used to quantify total and specific HPB in naturally contaminated, decomposing mahi–mahi, Spanish mackerel and tuna (Thunnus albacares) samples. The results of this study indicate that MPN-real-time PCR assays can be used to accurately enumerate total and specific HPB in fish samples. These assays can be applied to assess the effectiveness of mitigation strategies and understand the relationship between HPB and histamine production in decomposing fish.
► Quantification of total and specific histamine-producing bacteria in fish by MPN RTi-PCR. ► Assay was 100% inclusive for detecting specific histamine-producing bacteria (HPB) species. ► The assays accurately quantified total and specific HPB in spiked and decomposed fish samples. |
doi_str_mv | 10.1016/j.fm.2011.05.006 |
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► Quantification of total and specific histamine-producing bacteria in fish by MPN RTi-PCR. ► Assay was 100% inclusive for detecting specific histamine-producing bacteria (HPB) species. ► The assays accurately quantified total and specific HPB in spiked and decomposed fish samples.</description><identifier>ISSN: 0740-0020</identifier><identifier>EISSN: 1095-9998</identifier><identifier>DOI: 10.1016/j.fm.2011.05.006</identifier><identifier>PMID: 21839377</identifier><identifier>CODEN: FOMIE5</identifier><language>eng</language><publisher>Kidlington: Elsevier Ltd</publisher><subject>Animals ; Bacteria ; Bacteria - growth & development ; Bacteria - metabolism ; Bacterial Load - methods ; Biological and medical sciences ; Coryphaena hippurus ; Enterobacter aerogenes ; Fish ; Fishes - microbiology ; Food industries ; Food microbiology ; Fundamental and applied biological sciences. Psychology ; Gram-negative bacteria ; Histamine ; Histamine - biosynthesis ; Histidine decarboxylase ; mackerel ; Marine ; Morganella morganii ; MPN ; Photobacterium damselae ; polymerase chain reaction ; Raoultella planticola ; Real-time PCR ; Real-Time Polymerase Chain Reaction - methods ; risk reduction ; Scomber ; Scomberomorus ; Scomberomorus maculates ; Species Specificity ; Thunnus albacares ; tuna</subject><ispartof>Food microbiology, 2011-10, Vol.28 (7), p.1284-1292</ispartof><rights>2011 Elsevier Ltd</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2011 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c435t-74ca8158fa848e25f1934fc87cd61975e3dc37e1d584836fe57142273425bf9c3</citedby><cites>FETCH-LOGICAL-c435t-74ca8158fa848e25f1934fc87cd61975e3dc37e1d584836fe57142273425bf9c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24449662$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21839377$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bjornsdottir-Butler, Kristin</creatorcontrib><creatorcontrib>Jones, Jessica L.</creatorcontrib><creatorcontrib>Benner, Ronald A.</creatorcontrib><creatorcontrib>Burkhardt, William</creatorcontrib><title>Quantification of total and specific gram-negative histamine-producing bacteria species in fish using an MPN real-time PCR method</title><title>Food microbiology</title><addtitle>Food Microbiol</addtitle><description>Quantification of histamine-producing bacteria (HPB) is necessary in order to elucidate the role that HPB play in scombrotoxin (histamine) fish poisoning. We report here the evaluation of a real-time PCR method for the quantification of total and specific Gram-negative HPB species in fish using a most probable number (MPN) format. The species-specific real-time PCR assay was 100% inclusive for independently detecting Morganella morganii, Enterobacter aerogenes, Raoultella planticola/ornithinolytica and Photobacterium damselae and did not cross react with other histamine- or non- histamine-producing bacteria. The efficiency of the reactions in the absence and presence of Spanish mackerel enrichment containing 1 × 106 CFU/ml of background microflora were 93–104 and 92–99%, respectively. The MPN-real-time PCR assay accurately quantified total and specific HPB in spiked mahi–mahi (Coryphaena hippurus) and Spanish mackerel (Scomberomorus maculates) samples. These methods were used to quantify total and specific HPB in naturally contaminated, decomposing mahi–mahi, Spanish mackerel and tuna (Thunnus albacares) samples. The results of this study indicate that MPN-real-time PCR assays can be used to accurately enumerate total and specific HPB in fish samples. These assays can be applied to assess the effectiveness of mitigation strategies and understand the relationship between HPB and histamine production in decomposing fish.
► Quantification of total and specific histamine-producing bacteria in fish by MPN RTi-PCR. ► Assay was 100% inclusive for detecting specific histamine-producing bacteria (HPB) species. ► The assays accurately quantified total and specific HPB in spiked and decomposed fish samples.</description><subject>Animals</subject><subject>Bacteria</subject><subject>Bacteria - growth & development</subject><subject>Bacteria - metabolism</subject><subject>Bacterial Load - methods</subject><subject>Biological and medical sciences</subject><subject>Coryphaena hippurus</subject><subject>Enterobacter aerogenes</subject><subject>Fish</subject><subject>Fishes - microbiology</subject><subject>Food industries</subject><subject>Food microbiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gram-negative bacteria</subject><subject>Histamine</subject><subject>Histamine - biosynthesis</subject><subject>Histidine decarboxylase</subject><subject>mackerel</subject><subject>Marine</subject><subject>Morganella morganii</subject><subject>MPN</subject><subject>Photobacterium damselae</subject><subject>polymerase chain reaction</subject><subject>Raoultella planticola</subject><subject>Real-time PCR</subject><subject>Real-Time Polymerase Chain Reaction - methods</subject><subject>risk reduction</subject><subject>Scomber</subject><subject>Scomberomorus</subject><subject>Scomberomorus maculates</subject><subject>Species Specificity</subject><subject>Thunnus albacares</subject><subject>tuna</subject><issn>0740-0020</issn><issn>1095-9998</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNp1kTuP1DAURiMEYoeFngrcIKoEO7Zjmw6NeEkLLI-tLY9zPeNR4szazkqU_HMcZYCKysV3vnuvjqvqKcENwaR7dWzc2LSYkAbzBuPuXrUhWPFaKSXvVxssGK4xbvFF9SilIy4gp-phddESSRUVYlP9-jqbkL3z1mQ_BTQ5lKdsBmRCj9IJ7BKhfTRjHWBfmDtAB5-yGX2A-hSnfrY-7NHO2AzRm7UDCfmAnE8HNKclNgF9uv6MIpihzn4EdL39hkbIh6l_XD1wZkjw5PxeVjfv3v7Yfqivvrz_uH1zVVtGea4Fs0YSLp2RTELLHVGUOSuF7TuiBAfaWyqA9LzktHPABWFtKyhr-c4pSy-rl-vccvTtDCnr0ScLw2ACTHPSUkpCGFFtIfFK2jilFMHpU_SjiT81wXrxro_ajXrxrjHXxXupPDsPn3cj9H8Lf0QX4MUZMMmawUUTrE__OMaY6rpl9_OVc2bSZh8Lc_O9bGLl8xQhghTi9UpAkXXnIepUhAcLvY9gs-4n__87fwPO5qjK</recordid><startdate>20111001</startdate><enddate>20111001</enddate><creator>Bjornsdottir-Butler, Kristin</creator><creator>Jones, Jessica L.</creator><creator>Benner, Ronald A.</creator><creator>Burkhardt, William</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>P64</scope></search><sort><creationdate>20111001</creationdate><title>Quantification of total and specific gram-negative histamine-producing bacteria species in fish using an MPN real-time PCR method</title><author>Bjornsdottir-Butler, Kristin ; Jones, Jessica L. ; Benner, Ronald A. ; Burkhardt, William</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c435t-74ca8158fa848e25f1934fc87cd61975e3dc37e1d584836fe57142273425bf9c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Animals</topic><topic>Bacteria</topic><topic>Bacteria - growth & development</topic><topic>Bacteria - metabolism</topic><topic>Bacterial Load - methods</topic><topic>Biological and medical sciences</topic><topic>Coryphaena hippurus</topic><topic>Enterobacter aerogenes</topic><topic>Fish</topic><topic>Fishes - microbiology</topic><topic>Food industries</topic><topic>Food microbiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gram-negative bacteria</topic><topic>Histamine</topic><topic>Histamine - biosynthesis</topic><topic>Histidine decarboxylase</topic><topic>mackerel</topic><topic>Marine</topic><topic>Morganella morganii</topic><topic>MPN</topic><topic>Photobacterium damselae</topic><topic>polymerase chain reaction</topic><topic>Raoultella planticola</topic><topic>Real-time PCR</topic><topic>Real-Time Polymerase Chain Reaction - methods</topic><topic>risk reduction</topic><topic>Scomber</topic><topic>Scomberomorus</topic><topic>Scomberomorus maculates</topic><topic>Species Specificity</topic><topic>Thunnus albacares</topic><topic>tuna</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bjornsdottir-Butler, Kristin</creatorcontrib><creatorcontrib>Jones, Jessica L.</creatorcontrib><creatorcontrib>Benner, Ronald A.</creatorcontrib><creatorcontrib>Burkhardt, William</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Food microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bjornsdottir-Butler, Kristin</au><au>Jones, Jessica L.</au><au>Benner, Ronald A.</au><au>Burkhardt, William</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Quantification of total and specific gram-negative histamine-producing bacteria species in fish using an MPN real-time PCR method</atitle><jtitle>Food microbiology</jtitle><addtitle>Food Microbiol</addtitle><date>2011-10-01</date><risdate>2011</risdate><volume>28</volume><issue>7</issue><spage>1284</spage><epage>1292</epage><pages>1284-1292</pages><issn>0740-0020</issn><eissn>1095-9998</eissn><coden>FOMIE5</coden><abstract>Quantification of histamine-producing bacteria (HPB) is necessary in order to elucidate the role that HPB play in scombrotoxin (histamine) fish poisoning. We report here the evaluation of a real-time PCR method for the quantification of total and specific Gram-negative HPB species in fish using a most probable number (MPN) format. The species-specific real-time PCR assay was 100% inclusive for independently detecting Morganella morganii, Enterobacter aerogenes, Raoultella planticola/ornithinolytica and Photobacterium damselae and did not cross react with other histamine- or non- histamine-producing bacteria. The efficiency of the reactions in the absence and presence of Spanish mackerel enrichment containing 1 × 106 CFU/ml of background microflora were 93–104 and 92–99%, respectively. The MPN-real-time PCR assay accurately quantified total and specific HPB in spiked mahi–mahi (Coryphaena hippurus) and Spanish mackerel (Scomberomorus maculates) samples. These methods were used to quantify total and specific HPB in naturally contaminated, decomposing mahi–mahi, Spanish mackerel and tuna (Thunnus albacares) samples. The results of this study indicate that MPN-real-time PCR assays can be used to accurately enumerate total and specific HPB in fish samples. These assays can be applied to assess the effectiveness of mitigation strategies and understand the relationship between HPB and histamine production in decomposing fish.
► Quantification of total and specific histamine-producing bacteria in fish by MPN RTi-PCR. ► Assay was 100% inclusive for detecting specific histamine-producing bacteria (HPB) species. ► The assays accurately quantified total and specific HPB in spiked and decomposed fish samples.</abstract><cop>Kidlington</cop><pub>Elsevier Ltd</pub><pmid>21839377</pmid><doi>10.1016/j.fm.2011.05.006</doi><tpages>9</tpages></addata></record> |
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subjects | Animals Bacteria Bacteria - growth & development Bacteria - metabolism Bacterial Load - methods Biological and medical sciences Coryphaena hippurus Enterobacter aerogenes Fish Fishes - microbiology Food industries Food microbiology Fundamental and applied biological sciences. Psychology Gram-negative bacteria Histamine Histamine - biosynthesis Histidine decarboxylase mackerel Marine Morganella morganii MPN Photobacterium damselae polymerase chain reaction Raoultella planticola Real-time PCR Real-Time Polymerase Chain Reaction - methods risk reduction Scomber Scomberomorus Scomberomorus maculates Species Specificity Thunnus albacares tuna |
title | Quantification of total and specific gram-negative histamine-producing bacteria species in fish using an MPN real-time PCR method |
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