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Distinct proteomic profiles characterise non‐erosive from erosive reflux disease
Aliment Pharmacol Ther 2011; 34: 982–993 Summary Background Erosive reflux disease (ERD) and non‐erosive reflux disease (NERD) are often regarded as part of the spectrum of the same disease. Aim To elucidate molecular features that characterise NERD and ERD at the protein level. Methods A total o...
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Published in: | Alimentary pharmacology & therapeutics 2011-10, Vol.34 (8), p.982-993 |
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creator | Calabrese, C. Marzano, V. Urbani, A. Lazzarini, G. Valerii, M. C. Liguori, G. Di Molfetta, S. Rizzello, F. Gionchetti, P. Campieri, M. Spisni, E. |
description | Aliment Pharmacol Ther 2011; 34: 982–993
Summary
Background Erosive reflux disease (ERD) and non‐erosive reflux disease (NERD) are often regarded as part of the spectrum of the same disease.
Aim To elucidate molecular features that characterise NERD and ERD at the protein level.
Methods A total of 56 consecutive subjects were enrolled: 10 healthy subjects, 24 with NERD and 22 with ERD. Eight specimens were taken from macroscopically normal mucosa at 5 cm of gastro‐oesophageal junction. Four were processed for the proteins extraction and four for evaluation using haematoxylin‐eosin and immunohistochemistry. We used shotgun proteomics to identify tentative disease molecular features for ERD or NERD. Candidate distinctive proteins were verified using immunohistochemistry.
Results Shotgun proteomics analysis revealed 33 differentially expressed proteins in NERD vs. ERD samples, involved in cellular proliferation, keratinisation, stress responses and sugar metabolism. Based on a gene ontology meta‐analysis, seven of them were further analysed using Western blotting (WB) and four also using immunohistochemistry. We identified novel candidate disease molecular features for GERD and few distinctive proteins to discriminate NERD and ERD. In particular, Transitional Endoplasmic Reticulum ATPase (TER ATPase), GAPDH, Alpha 1 Acid Glycoprotein 1, Annexin A1, Calmodulin and 14‐3‐3 proteins were confirmed at WB analysis.
Conclusions Non‐erosive reflux disease and ERD are distinct disease entities at the protein level. This study proposes an array of candidate biomarkers possibly useful to discriminate between NERD and ERD. |
doi_str_mv | 10.1111/j.1365-2036.2011.04801.x |
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Summary
Background Erosive reflux disease (ERD) and non‐erosive reflux disease (NERD) are often regarded as part of the spectrum of the same disease.
Aim To elucidate molecular features that characterise NERD and ERD at the protein level.
Methods A total of 56 consecutive subjects were enrolled: 10 healthy subjects, 24 with NERD and 22 with ERD. Eight specimens were taken from macroscopically normal mucosa at 5 cm of gastro‐oesophageal junction. Four were processed for the proteins extraction and four for evaluation using haematoxylin‐eosin and immunohistochemistry. We used shotgun proteomics to identify tentative disease molecular features for ERD or NERD. Candidate distinctive proteins were verified using immunohistochemistry.
Results Shotgun proteomics analysis revealed 33 differentially expressed proteins in NERD vs. ERD samples, involved in cellular proliferation, keratinisation, stress responses and sugar metabolism. Based on a gene ontology meta‐analysis, seven of them were further analysed using Western blotting (WB) and four also using immunohistochemistry. We identified novel candidate disease molecular features for GERD and few distinctive proteins to discriminate NERD and ERD. In particular, Transitional Endoplasmic Reticulum ATPase (TER ATPase), GAPDH, Alpha 1 Acid Glycoprotein 1, Annexin A1, Calmodulin and 14‐3‐3 proteins were confirmed at WB analysis.
Conclusions Non‐erosive reflux disease and ERD are distinct disease entities at the protein level. This study proposes an array of candidate biomarkers possibly useful to discriminate between NERD and ERD.</description><identifier>ISSN: 0269-2813</identifier><identifier>EISSN: 1365-2036</identifier><identifier>DOI: 10.1111/j.1365-2036.2011.04801.x</identifier><identifier>PMID: 21848794</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Adult ; Aged ; Biological and medical sciences ; Biomarkers - metabolism ; Biopsy ; Blotting, Western ; Case-Control Studies ; Digestive system ; Endoscopy, Gastrointestinal ; Esophageal pH Monitoring ; Female ; Gastroenterology. Liver. Pancreas. Abdomen ; Gastroesophageal Reflux - metabolism ; Gene Expression Profiling - methods ; Humans ; Male ; Medical sciences ; Middle Aged ; Pharmacology. Drug treatments ; Proteome - metabolism ; Proteomics - methods ; Severity of Illness Index ; Young Adult</subject><ispartof>Alimentary pharmacology & therapeutics, 2011-10, Vol.34 (8), p.982-993</ispartof><rights>2011 Blackwell Publishing Ltd</rights><rights>2015 INIST-CNRS</rights><rights>2011 Blackwell Publishing Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3991-97881e37b3ca9c6bcbdcbbb6ed55b82a0670da351dc42ff4e473ef1d59e940e53</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24537626$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21848794$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Calabrese, C.</creatorcontrib><creatorcontrib>Marzano, V.</creatorcontrib><creatorcontrib>Urbani, A.</creatorcontrib><creatorcontrib>Lazzarini, G.</creatorcontrib><creatorcontrib>Valerii, M. C.</creatorcontrib><creatorcontrib>Liguori, G.</creatorcontrib><creatorcontrib>Di Molfetta, S.</creatorcontrib><creatorcontrib>Rizzello, F.</creatorcontrib><creatorcontrib>Gionchetti, P.</creatorcontrib><creatorcontrib>Campieri, M.</creatorcontrib><creatorcontrib>Spisni, E.</creatorcontrib><title>Distinct proteomic profiles characterise non‐erosive from erosive reflux disease</title><title>Alimentary pharmacology & therapeutics</title><addtitle>Aliment Pharmacol Ther</addtitle><description>Aliment Pharmacol Ther 2011; 34: 982–993
Summary
Background Erosive reflux disease (ERD) and non‐erosive reflux disease (NERD) are often regarded as part of the spectrum of the same disease.
Aim To elucidate molecular features that characterise NERD and ERD at the protein level.
Methods A total of 56 consecutive subjects were enrolled: 10 healthy subjects, 24 with NERD and 22 with ERD. Eight specimens were taken from macroscopically normal mucosa at 5 cm of gastro‐oesophageal junction. Four were processed for the proteins extraction and four for evaluation using haematoxylin‐eosin and immunohistochemistry. We used shotgun proteomics to identify tentative disease molecular features for ERD or NERD. Candidate distinctive proteins were verified using immunohistochemistry.
Results Shotgun proteomics analysis revealed 33 differentially expressed proteins in NERD vs. ERD samples, involved in cellular proliferation, keratinisation, stress responses and sugar metabolism. Based on a gene ontology meta‐analysis, seven of them were further analysed using Western blotting (WB) and four also using immunohistochemistry. We identified novel candidate disease molecular features for GERD and few distinctive proteins to discriminate NERD and ERD. In particular, Transitional Endoplasmic Reticulum ATPase (TER ATPase), GAPDH, Alpha 1 Acid Glycoprotein 1, Annexin A1, Calmodulin and 14‐3‐3 proteins were confirmed at WB analysis.
Conclusions Non‐erosive reflux disease and ERD are distinct disease entities at the protein level. This study proposes an array of candidate biomarkers possibly useful to discriminate between NERD and ERD.</description><subject>Adult</subject><subject>Aged</subject><subject>Biological and medical sciences</subject><subject>Biomarkers - metabolism</subject><subject>Biopsy</subject><subject>Blotting, Western</subject><subject>Case-Control Studies</subject><subject>Digestive system</subject><subject>Endoscopy, Gastrointestinal</subject><subject>Esophageal pH Monitoring</subject><subject>Female</subject><subject>Gastroenterology. Liver. Pancreas. Abdomen</subject><subject>Gastroesophageal Reflux - metabolism</subject><subject>Gene Expression Profiling - methods</subject><subject>Humans</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Middle Aged</subject><subject>Pharmacology. Drug treatments</subject><subject>Proteome - metabolism</subject><subject>Proteomics - methods</subject><subject>Severity of Illness Index</subject><subject>Young Adult</subject><issn>0269-2813</issn><issn>1365-2036</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNpFkclOwzAQhi0EoqXwCigXxCnBS2LHBw5VWaVKIFTOluNMhKssxU6hvfEIPCNPQkIX5uKx5tNo9P0IBQRHpKureUQYT0KKGY8oJiTCcYpJtDpAw_3gEA0x5TKkKWEDdOL9HGPMBabHaEBJGqdCxkP0cmN9a2vTBgvXtNBU1vRdYUvwgXnTTpsWnPUQ1E398_UNrvH2A4LCNVWw-zgoyuUqyDtMezhFR4UuPZxt3xF6vbudTR7C6dP942Q8DQ2TkoRSpCkBJjJmtDQ8M1lusizjkCdJllLd35prlpDcxLQoYogFg4LkiQQZY0jYCF1u9nb3vi_Bt6qy3kBZ6hqapVepZKKTw0RHnm_JZVZBrhbOVtqt1U5DB1xsAe2NLguna2P9PxcnTHDKO-56w312ftb7OcGqj0XNVW9f9fZVH4v6i0Wt1Ph51nfsFxbkgp8</recordid><startdate>201110</startdate><enddate>201110</enddate><creator>Calabrese, C.</creator><creator>Marzano, V.</creator><creator>Urbani, A.</creator><creator>Lazzarini, G.</creator><creator>Valerii, M. C.</creator><creator>Liguori, G.</creator><creator>Di Molfetta, S.</creator><creator>Rizzello, F.</creator><creator>Gionchetti, P.</creator><creator>Campieri, M.</creator><creator>Spisni, E.</creator><general>Blackwell Publishing Ltd</general><general>Blackwell</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope></search><sort><creationdate>201110</creationdate><title>Distinct proteomic profiles characterise non‐erosive from erosive reflux disease</title><author>Calabrese, C. ; Marzano, V. ; Urbani, A. ; Lazzarini, G. ; Valerii, M. C. ; Liguori, G. ; Di Molfetta, S. ; Rizzello, F. ; Gionchetti, P. ; Campieri, M. ; Spisni, E.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3991-97881e37b3ca9c6bcbdcbbb6ed55b82a0670da351dc42ff4e473ef1d59e940e53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Adult</topic><topic>Aged</topic><topic>Biological and medical sciences</topic><topic>Biomarkers - metabolism</topic><topic>Biopsy</topic><topic>Blotting, Western</topic><topic>Case-Control Studies</topic><topic>Digestive system</topic><topic>Endoscopy, Gastrointestinal</topic><topic>Esophageal pH Monitoring</topic><topic>Female</topic><topic>Gastroenterology. Liver. Pancreas. Abdomen</topic><topic>Gastroesophageal Reflux - metabolism</topic><topic>Gene Expression Profiling - methods</topic><topic>Humans</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Middle Aged</topic><topic>Pharmacology. Drug treatments</topic><topic>Proteome - metabolism</topic><topic>Proteomics - methods</topic><topic>Severity of Illness Index</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Calabrese, C.</creatorcontrib><creatorcontrib>Marzano, V.</creatorcontrib><creatorcontrib>Urbani, A.</creatorcontrib><creatorcontrib>Lazzarini, G.</creatorcontrib><creatorcontrib>Valerii, M. C.</creatorcontrib><creatorcontrib>Liguori, G.</creatorcontrib><creatorcontrib>Di Molfetta, S.</creatorcontrib><creatorcontrib>Rizzello, F.</creatorcontrib><creatorcontrib>Gionchetti, P.</creatorcontrib><creatorcontrib>Campieri, M.</creatorcontrib><creatorcontrib>Spisni, E.</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><jtitle>Alimentary pharmacology & therapeutics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Calabrese, C.</au><au>Marzano, V.</au><au>Urbani, A.</au><au>Lazzarini, G.</au><au>Valerii, M. C.</au><au>Liguori, G.</au><au>Di Molfetta, S.</au><au>Rizzello, F.</au><au>Gionchetti, P.</au><au>Campieri, M.</au><au>Spisni, E.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Distinct proteomic profiles characterise non‐erosive from erosive reflux disease</atitle><jtitle>Alimentary pharmacology & therapeutics</jtitle><addtitle>Aliment Pharmacol Ther</addtitle><date>2011-10</date><risdate>2011</risdate><volume>34</volume><issue>8</issue><spage>982</spage><epage>993</epage><pages>982-993</pages><issn>0269-2813</issn><eissn>1365-2036</eissn><abstract>Aliment Pharmacol Ther 2011; 34: 982–993
Summary
Background Erosive reflux disease (ERD) and non‐erosive reflux disease (NERD) are often regarded as part of the spectrum of the same disease.
Aim To elucidate molecular features that characterise NERD and ERD at the protein level.
Methods A total of 56 consecutive subjects were enrolled: 10 healthy subjects, 24 with NERD and 22 with ERD. Eight specimens were taken from macroscopically normal mucosa at 5 cm of gastro‐oesophageal junction. Four were processed for the proteins extraction and four for evaluation using haematoxylin‐eosin and immunohistochemistry. We used shotgun proteomics to identify tentative disease molecular features for ERD or NERD. Candidate distinctive proteins were verified using immunohistochemistry.
Results Shotgun proteomics analysis revealed 33 differentially expressed proteins in NERD vs. ERD samples, involved in cellular proliferation, keratinisation, stress responses and sugar metabolism. Based on a gene ontology meta‐analysis, seven of them were further analysed using Western blotting (WB) and four also using immunohistochemistry. We identified novel candidate disease molecular features for GERD and few distinctive proteins to discriminate NERD and ERD. In particular, Transitional Endoplasmic Reticulum ATPase (TER ATPase), GAPDH, Alpha 1 Acid Glycoprotein 1, Annexin A1, Calmodulin and 14‐3‐3 proteins were confirmed at WB analysis.
Conclusions Non‐erosive reflux disease and ERD are distinct disease entities at the protein level. This study proposes an array of candidate biomarkers possibly useful to discriminate between NERD and ERD.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>21848794</pmid><doi>10.1111/j.1365-2036.2011.04801.x</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adult Aged Biological and medical sciences Biomarkers - metabolism Biopsy Blotting, Western Case-Control Studies Digestive system Endoscopy, Gastrointestinal Esophageal pH Monitoring Female Gastroenterology. Liver. Pancreas. Abdomen Gastroesophageal Reflux - metabolism Gene Expression Profiling - methods Humans Male Medical sciences Middle Aged Pharmacology. Drug treatments Proteome - metabolism Proteomics - methods Severity of Illness Index Young Adult |
title | Distinct proteomic profiles characterise non‐erosive from erosive reflux disease |
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