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Association of toll-like receptor four single nucleotide polymorphisms with incidence of infectious bovine keratoconjunctivitis (IBK) in cattle
Toll-like receptor 4 (TLR4) is a receptor protein that binds pathogen ligands, which are mainly associated with Gram-negative bacteria. The objective of this study was to investigate the association of nucleotide polymorphisms in TLR4 with infectious bovine keratoconjunctivitis (IBK), or pinkeye, in...
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Published in: | Immunogenetics (New York) 2011-02, Vol.63 (2), p.115-119 |
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description | Toll-like receptor 4 (TLR4) is a receptor protein that binds pathogen ligands, which are mainly associated with Gram-negative bacteria. The objective of this study was to investigate the association of nucleotide polymorphisms in TLR4 with infectious bovine keratoconjunctivitis (IBK), or pinkeye, incidence in American Angus cattle. Animals with previously calculated breeding values for IBK susceptibility were used to identify two SNPs in TLR4; Int1 (A/G) in intron1 (−26 Ex2 position) and Ex3 (C/T) in exon3 (1,678 position). To investigate the possible role of these SNPs in IBK susceptibility, the disease incidence information was collected on 370 calves raised in Iowa at two time points--June or August (disease season) and October (at weaning) and genotyped using PCR-RFLP protocols. In statistical models including year, pasture management group, and SNP, the Int1 SNP had a significant effect on IBK infection rates both in-season (P < 0.05) and at weaning (P < 0.01), whereas the Ex3 SNP was not significant (P > 0.79) at either time point. Furthermore, the Int1 SNP alone could account for 2.1% of phenotypic variation in IBK infection during the disease season and 3.0% of phenotypic variation in IBK infection at the time of weaning. These data indicate that there is a relationship between Int1 genotype and the rate of IBK infection in American Angus cattle. |
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Jr ; Kumar, Dinesh ; Ortega, Manuel A ; Rodiguez, Jose ; Reecy, James M</creator><creatorcontrib>Kataria, Ranjit S ; Tait, Richard G. Jr ; Kumar, Dinesh ; Ortega, Manuel A ; Rodiguez, Jose ; Reecy, James M</creatorcontrib><description>Toll-like receptor 4 (TLR4) is a receptor protein that binds pathogen ligands, which are mainly associated with Gram-negative bacteria. The objective of this study was to investigate the association of nucleotide polymorphisms in TLR4 with infectious bovine keratoconjunctivitis (IBK), or pinkeye, incidence in American Angus cattle. Animals with previously calculated breeding values for IBK susceptibility were used to identify two SNPs in TLR4; Int1 (A/G) in intron1 (−26 Ex2 position) and Ex3 (C/T) in exon3 (1,678 position). To investigate the possible role of these SNPs in IBK susceptibility, the disease incidence information was collected on 370 calves raised in Iowa at two time points--June or August (disease season) and October (at weaning) and genotyped using PCR-RFLP protocols. In statistical models including year, pasture management group, and SNP, the Int1 SNP had a significant effect on IBK infection rates both in-season (P < 0.05) and at weaning (P < 0.01), whereas the Ex3 SNP was not significant (P > 0.79) at either time point. Furthermore, the Int1 SNP alone could account for 2.1% of phenotypic variation in IBK infection during the disease season and 3.0% of phenotypic variation in IBK infection at the time of weaning. These data indicate that there is a relationship between Int1 genotype and the rate of IBK infection in American Angus cattle.</description><identifier>ISSN: 0093-7711</identifier><identifier>EISSN: 1432-1211</identifier><identifier>DOI: 10.1007/s00251-010-0484-6</identifier><identifier>PMID: 20938658</identifier><language>eng</language><publisher>Berlin/Heidelberg: Berlin/Heidelberg : Springer-Verlag</publisher><subject>Allergology ; Animals ; Bacteria ; Biomedical and Life Sciences ; Biomedicine ; Breeding ; Brief Communication ; Cattle ; Cattle - genetics ; Cattle - immunology ; Cattle Diseases - genetics ; Cattle Diseases - immunology ; Cell Biology ; Cornea ; Data processing ; Disease ; Gene Function ; Genes ; Gram-negative bacteria ; Human Genetics ; Immunology ; Infection ; Infections ; Keratoconjunctivitis ; Keratoconjunctivitis, Infectious - genetics ; Keratoconjunctivitis, Infectious - immunology ; Ligands ; Mathematical models ; Pasture ; Pasture management ; Pathogens ; Phenotypic variations ; Polymerase chain reaction ; Polymorphism, Single Nucleotide ; Restriction fragment length polymorphism ; Seasons ; Single nucleotide polymorphisms ; Single-nucleotide polymorphism ; Statistical analysis ; Statistical models ; TLR4 protein ; Toll-like receptor 4 ; Toll-Like Receptor 4 - genetics ; Toll-Like Receptor 4 - immunology ; Toll-like receptors ; Weaning</subject><ispartof>Immunogenetics (New York), 2011-02, Vol.63 (2), p.115-119</ispartof><rights>Springer-Verlag 2010</rights><rights>Springer-Verlag 2011</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c426t-e5587c0479099b5cfb3d2bff5000507ba7637397c425ba21ea3cf62a98ca01373</citedby><cites>FETCH-LOGICAL-c426t-e5587c0479099b5cfb3d2bff5000507ba7637397c425ba21ea3cf62a98ca01373</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20938658$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kataria, Ranjit S</creatorcontrib><creatorcontrib>Tait, Richard G. Jr</creatorcontrib><creatorcontrib>Kumar, Dinesh</creatorcontrib><creatorcontrib>Ortega, Manuel A</creatorcontrib><creatorcontrib>Rodiguez, Jose</creatorcontrib><creatorcontrib>Reecy, James M</creatorcontrib><title>Association of toll-like receptor four single nucleotide polymorphisms with incidence of infectious bovine keratoconjunctivitis (IBK) in cattle</title><title>Immunogenetics (New York)</title><addtitle>Immunogenetics</addtitle><addtitle>Immunogenetics</addtitle><description>Toll-like receptor 4 (TLR4) is a receptor protein that binds pathogen ligands, which are mainly associated with Gram-negative bacteria. The objective of this study was to investigate the association of nucleotide polymorphisms in TLR4 with infectious bovine keratoconjunctivitis (IBK), or pinkeye, incidence in American Angus cattle. Animals with previously calculated breeding values for IBK susceptibility were used to identify two SNPs in TLR4; Int1 (A/G) in intron1 (−26 Ex2 position) and Ex3 (C/T) in exon3 (1,678 position). To investigate the possible role of these SNPs in IBK susceptibility, the disease incidence information was collected on 370 calves raised in Iowa at two time points--June or August (disease season) and October (at weaning) and genotyped using PCR-RFLP protocols. In statistical models including year, pasture management group, and SNP, the Int1 SNP had a significant effect on IBK infection rates both in-season (P < 0.05) and at weaning (P < 0.01), whereas the Ex3 SNP was not significant (P > 0.79) at either time point. Furthermore, the Int1 SNP alone could account for 2.1% of phenotypic variation in IBK infection during the disease season and 3.0% of phenotypic variation in IBK infection at the time of weaning. These data indicate that there is a relationship between Int1 genotype and the rate of IBK infection in American Angus cattle.</description><subject>Allergology</subject><subject>Animals</subject><subject>Bacteria</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Breeding</subject><subject>Brief Communication</subject><subject>Cattle</subject><subject>Cattle - genetics</subject><subject>Cattle - immunology</subject><subject>Cattle Diseases - genetics</subject><subject>Cattle Diseases - immunology</subject><subject>Cell Biology</subject><subject>Cornea</subject><subject>Data processing</subject><subject>Disease</subject><subject>Gene Function</subject><subject>Genes</subject><subject>Gram-negative bacteria</subject><subject>Human Genetics</subject><subject>Immunology</subject><subject>Infection</subject><subject>Infections</subject><subject>Keratoconjunctivitis</subject><subject>Keratoconjunctivitis, Infectious - genetics</subject><subject>Keratoconjunctivitis, Infectious - immunology</subject><subject>Ligands</subject><subject>Mathematical models</subject><subject>Pasture</subject><subject>Pasture management</subject><subject>Pathogens</subject><subject>Phenotypic variations</subject><subject>Polymerase chain reaction</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Restriction fragment length polymorphism</subject><subject>Seasons</subject><subject>Single nucleotide polymorphisms</subject><subject>Single-nucleotide polymorphism</subject><subject>Statistical analysis</subject><subject>Statistical models</subject><subject>TLR4 protein</subject><subject>Toll-like receptor 4</subject><subject>Toll-Like Receptor 4 - genetics</subject><subject>Toll-Like Receptor 4 - immunology</subject><subject>Toll-like receptors</subject><subject>Weaning</subject><issn>0093-7711</issn><issn>1432-1211</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNqFkk9vFSEUxYnR2Gf1A7hR4kZdjF6YYRiWtfFPYxMX2jVhePDKKwNTYGr6KfzK8jJVExe6YnF-51y4B4SeEnhDAPjbDEAZaYBAA93QNf09tCFdSxtCCbmPNgCibTgn5Ag9ynkPQJig_UN0RKsw9GzYoB8nOUftVHEx4Ghxid433l0ZnIw2c4kJ27gknF3YeYPDor2JxW0NnqO_nWKaL12eMv7uyiV2QVclaHNIcsEaXWOXjMd444LBVyapEnUM-yVU5cYVl_Grs3efX1cYa1WKN4_RA6t8Nk_uzmN08eH9t9NPzfmXj2enJ-eN7mhfGsPYwDV0XIAQI9N2bLd0tJYBAAM-Kt63vBW80mxUlBjVattTJQatgFTpGL1cc-cUrxeTi5xc1sZ7FUy9shTACQPaif-SQx1DGB3aSr74i9zX1YX6jAoxQplo-wqRFdIp5pyMlXNyk0q3koA8tCrXVmVtVR5alQfPs7vgZZzM9rfjV40VoCuQqxR2Jv2Z_K_U56vJqijVLrksL77Suh0g9Zf0tGt_AhMNt7g</recordid><startdate>20110201</startdate><enddate>20110201</enddate><creator>Kataria, Ranjit S</creator><creator>Tait, Richard G. 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Jr</au><au>Kumar, Dinesh</au><au>Ortega, Manuel A</au><au>Rodiguez, Jose</au><au>Reecy, James M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Association of toll-like receptor four single nucleotide polymorphisms with incidence of infectious bovine keratoconjunctivitis (IBK) in cattle</atitle><jtitle>Immunogenetics (New York)</jtitle><stitle>Immunogenetics</stitle><addtitle>Immunogenetics</addtitle><date>2011-02-01</date><risdate>2011</risdate><volume>63</volume><issue>2</issue><spage>115</spage><epage>119</epage><pages>115-119</pages><issn>0093-7711</issn><eissn>1432-1211</eissn><abstract>Toll-like receptor 4 (TLR4) is a receptor protein that binds pathogen ligands, which are mainly associated with Gram-negative bacteria. The objective of this study was to investigate the association of nucleotide polymorphisms in TLR4 with infectious bovine keratoconjunctivitis (IBK), or pinkeye, incidence in American Angus cattle. Animals with previously calculated breeding values for IBK susceptibility were used to identify two SNPs in TLR4; Int1 (A/G) in intron1 (−26 Ex2 position) and Ex3 (C/T) in exon3 (1,678 position). To investigate the possible role of these SNPs in IBK susceptibility, the disease incidence information was collected on 370 calves raised in Iowa at two time points--June or August (disease season) and October (at weaning) and genotyped using PCR-RFLP protocols. In statistical models including year, pasture management group, and SNP, the Int1 SNP had a significant effect on IBK infection rates both in-season (P < 0.05) and at weaning (P < 0.01), whereas the Ex3 SNP was not significant (P > 0.79) at either time point. Furthermore, the Int1 SNP alone could account for 2.1% of phenotypic variation in IBK infection during the disease season and 3.0% of phenotypic variation in IBK infection at the time of weaning. 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subjects | Allergology Animals Bacteria Biomedical and Life Sciences Biomedicine Breeding Brief Communication Cattle Cattle - genetics Cattle - immunology Cattle Diseases - genetics Cattle Diseases - immunology Cell Biology Cornea Data processing Disease Gene Function Genes Gram-negative bacteria Human Genetics Immunology Infection Infections Keratoconjunctivitis Keratoconjunctivitis, Infectious - genetics Keratoconjunctivitis, Infectious - immunology Ligands Mathematical models Pasture Pasture management Pathogens Phenotypic variations Polymerase chain reaction Polymorphism, Single Nucleotide Restriction fragment length polymorphism Seasons Single nucleotide polymorphisms Single-nucleotide polymorphism Statistical analysis Statistical models TLR4 protein Toll-like receptor 4 Toll-Like Receptor 4 - genetics Toll-Like Receptor 4 - immunology Toll-like receptors Weaning |
title | Association of toll-like receptor four single nucleotide polymorphisms with incidence of infectious bovine keratoconjunctivitis (IBK) in cattle |
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