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Rapid Detection of Mycobacterium tuberculosis Complex and Rifampin Resistance in Smear-Negative Clinical Samples by Use of an Integrated Real-Time PCR Method
Sixty-four of 85 (75.3%) smear-negative respiratory (n = 78) and nonrespiratory (n = 7) samples with positive cultures of Mycobacterium tuberculosis complex (MTC) were detected by the GeneXpert system using the Xpert MTB/RIF assay (GX). In addition, GX found rpoB mutations in all six of the rifampin...
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Published in: | Journal of Clinical Microbiology 2011-03, Vol.49 (3), p.1137-1139 |
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creator | Moure, Raquel Muñoz, Laura Torres, Miriam Santin, Miguel Martín, Rogelio Alcaide, Fernando |
description | Sixty-four of 85 (75.3%) smear-negative respiratory (n = 78) and nonrespiratory (n = 7) samples with positive cultures of Mycobacterium tuberculosis complex (MTC) were detected by the GeneXpert system using the Xpert MTB/RIF assay (GX). In addition, GX found rpoB mutations in all six of the rifampin-resistant strains detected. The test was negative in 20 culture-negative and 20 nontuberculous culture-positive samples (100% specificity). GX offers high potential for the diagnosis of tuberculosis due to its capacity for direct detection of MTC, its rapidity, and its simplicity. |
doi_str_mv | 10.1128/JCM.01831-10 |
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In addition, GX found rpoB mutations in all six of the rifampin-resistant strains detected. The test was negative in 20 culture-negative and 20 nontuberculous culture-positive samples (100% specificity). GX offers high potential for the diagnosis of tuberculosis due to its capacity for direct detection of MTC, its rapidity, and its simplicity.</description><identifier>ISSN: 0095-1137</identifier><identifier>EISSN: 1098-660X</identifier><identifier>DOI: 10.1128/JCM.01831-10</identifier><identifier>PMID: 21191053</identifier><identifier>CODEN: JCMIDW</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Bacterial Proteins - genetics ; Bacteriological Techniques - methods ; Bacteriology ; Biological and medical sciences ; DNA, Bacterial - genetics ; DNA-Directed RNA Polymerases ; Drug Resistance, Bacterial ; Fundamental and applied biological sciences. Psychology ; Humans ; Microbiology ; Miscellaneous ; Mutant Proteins - genetics ; Mycobacteriology and Aerobic Actinomycetes ; Mycobacterium tuberculosis ; Mycobacterium tuberculosis - drug effects ; Mycobacterium tuberculosis - genetics ; Mycobacterium tuberculosis - isolation & purification ; Polymerase Chain Reaction - methods ; Sensitivity and Specificity ; Time Factors ; Tuberculosis - diagnosis ; Tuberculosis - microbiology</subject><ispartof>Journal of Clinical Microbiology, 2011-03, Vol.49 (3), p.1137-1139</ispartof><rights>2015 INIST-CNRS</rights><rights>Copyright © 2011, American Society for Microbiology. 2011 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c561t-ea0f476f8a637c843a02676fdc51c36b84f2f0b8917aec0f38f271d65bb4ede3</citedby><cites>FETCH-LOGICAL-c561t-ea0f476f8a637c843a02676fdc51c36b84f2f0b8917aec0f38f271d65bb4ede3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3067676/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3067676/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,3188,3189,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=23917471$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21191053$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Moure, Raquel</creatorcontrib><creatorcontrib>Muñoz, Laura</creatorcontrib><creatorcontrib>Torres, Miriam</creatorcontrib><creatorcontrib>Santin, Miguel</creatorcontrib><creatorcontrib>Martín, Rogelio</creatorcontrib><creatorcontrib>Alcaide, Fernando</creatorcontrib><title>Rapid Detection of Mycobacterium tuberculosis Complex and Rifampin Resistance in Smear-Negative Clinical Samples by Use of an Integrated Real-Time PCR Method</title><title>Journal of Clinical Microbiology</title><addtitle>J Clin Microbiol</addtitle><description>Sixty-four of 85 (75.3%) smear-negative respiratory (n = 78) and nonrespiratory (n = 7) samples with positive cultures of Mycobacterium tuberculosis complex (MTC) were detected by the GeneXpert system using the Xpert MTB/RIF assay (GX). In addition, GX found rpoB mutations in all six of the rifampin-resistant strains detected. The test was negative in 20 culture-negative and 20 nontuberculous culture-positive samples (100% specificity). GX offers high potential for the diagnosis of tuberculosis due to its capacity for direct detection of MTC, its rapidity, and its simplicity.</description><subject>Bacterial Proteins - genetics</subject><subject>Bacteriological Techniques - methods</subject><subject>Bacteriology</subject><subject>Biological and medical sciences</subject><subject>DNA, Bacterial - genetics</subject><subject>DNA-Directed RNA Polymerases</subject><subject>Drug Resistance, Bacterial</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Humans</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Mutant Proteins - genetics</subject><subject>Mycobacteriology and Aerobic Actinomycetes</subject><subject>Mycobacterium tuberculosis</subject><subject>Mycobacterium tuberculosis - drug effects</subject><subject>Mycobacterium tuberculosis - genetics</subject><subject>Mycobacterium tuberculosis - isolation & purification</subject><subject>Polymerase Chain Reaction - methods</subject><subject>Sensitivity and Specificity</subject><subject>Time Factors</subject><subject>Tuberculosis - diagnosis</subject><subject>Tuberculosis - microbiology</subject><issn>0095-1137</issn><issn>1098-660X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNqFks2O0zAURiMEYsrAjjWYBWJDBjtOnGSDhMLfoCmgtiOxs26c69ajJC62M9CH4V1xaRlgxcqy7_F3bR8nyUNGzxjLqhcfmvkZZRVnKaO3khmjdZUKQb_cTmaU1kXKGC9PknveX1HK8rwo7iYnGWM1owWfJT8WsDUdeY0BVTB2JFaT-U7ZFlRAZ6aBhKlFp6beeuNJY4dtj98JjB1ZGA3D1oxkgbEUYFRI4mw5ILj0I64hmGskTW9Go6AnS9hv9aTdkUuP-z4wkvMx4NpBwBiH0KcrMyD53CzIHMPGdveTOxp6jw-O42myevtm1bxPLz69O29eXaSqECykCFTnpdAVCF6qKudAMxHnnSqY4qKtcp1p2lY1KwEV1bzSWck6UbRtjh3y0-TlIXY7tQN2CsfgoJdbZwZwO2nByH8ro9nItb2WnMY2pYgBz44Bzn6d0Ac5GK-w72FEO3lZ05KJLML_JauiyCjPah7J5wdSOeu9Q31zHkbl3ryM5uUv83El4o_-vsMN_Ft1BJ4eAfDRh3ZRmPF_OB5fJy9Z5J4cuI1Zb74ZhxL8IK_UIPNacrn_TpF5fGA0WAlrF3MulxllnLI6r2qR8Z9PQs0P</recordid><startdate>20110301</startdate><enddate>20110301</enddate><creator>Moure, Raquel</creator><creator>Muñoz, Laura</creator><creator>Torres, Miriam</creator><creator>Santin, Miguel</creator><creator>Martín, Rogelio</creator><creator>Alcaide, Fernando</creator><general>American Society for Microbiology</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QL</scope><scope>C1K</scope><scope>5PM</scope></search><sort><creationdate>20110301</creationdate><title>Rapid Detection of Mycobacterium tuberculosis Complex and Rifampin Resistance in Smear-Negative Clinical Samples by Use of an Integrated Real-Time PCR Method</title><author>Moure, Raquel ; Muñoz, Laura ; Torres, Miriam ; Santin, Miguel ; Martín, Rogelio ; Alcaide, Fernando</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c561t-ea0f476f8a637c843a02676fdc51c36b84f2f0b8917aec0f38f271d65bb4ede3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Bacterial Proteins - genetics</topic><topic>Bacteriological Techniques - methods</topic><topic>Bacteriology</topic><topic>Biological and medical sciences</topic><topic>DNA, Bacterial - genetics</topic><topic>DNA-Directed RNA Polymerases</topic><topic>Drug Resistance, Bacterial</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Humans</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Mutant Proteins - genetics</topic><topic>Mycobacteriology and Aerobic Actinomycetes</topic><topic>Mycobacterium tuberculosis</topic><topic>Mycobacterium tuberculosis - drug effects</topic><topic>Mycobacterium tuberculosis - genetics</topic><topic>Mycobacterium tuberculosis - isolation & purification</topic><topic>Polymerase Chain Reaction - methods</topic><topic>Sensitivity and Specificity</topic><topic>Time Factors</topic><topic>Tuberculosis - diagnosis</topic><topic>Tuberculosis - microbiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Moure, Raquel</creatorcontrib><creatorcontrib>Muñoz, Laura</creatorcontrib><creatorcontrib>Torres, Miriam</creatorcontrib><creatorcontrib>Santin, Miguel</creatorcontrib><creatorcontrib>Martín, Rogelio</creatorcontrib><creatorcontrib>Alcaide, Fernando</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of Clinical Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Moure, Raquel</au><au>Muñoz, Laura</au><au>Torres, Miriam</au><au>Santin, Miguel</au><au>Martín, Rogelio</au><au>Alcaide, Fernando</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Rapid Detection of Mycobacterium tuberculosis Complex and Rifampin Resistance in Smear-Negative Clinical Samples by Use of an Integrated Real-Time PCR Method</atitle><jtitle>Journal of Clinical Microbiology</jtitle><addtitle>J Clin Microbiol</addtitle><date>2011-03-01</date><risdate>2011</risdate><volume>49</volume><issue>3</issue><spage>1137</spage><epage>1139</epage><pages>1137-1139</pages><issn>0095-1137</issn><eissn>1098-660X</eissn><coden>JCMIDW</coden><abstract>Sixty-four of 85 (75.3%) smear-negative respiratory (n = 78) and nonrespiratory (n = 7) samples with positive cultures of Mycobacterium tuberculosis complex (MTC) were detected by the GeneXpert system using the Xpert MTB/RIF assay (GX). In addition, GX found rpoB mutations in all six of the rifampin-resistant strains detected. The test was negative in 20 culture-negative and 20 nontuberculous culture-positive samples (100% specificity). GX offers high potential for the diagnosis of tuberculosis due to its capacity for direct detection of MTC, its rapidity, and its simplicity.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>21191053</pmid><doi>10.1128/JCM.01831-10</doi><tpages>3</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Bacterial Proteins - genetics Bacteriological Techniques - methods Bacteriology Biological and medical sciences DNA, Bacterial - genetics DNA-Directed RNA Polymerases Drug Resistance, Bacterial Fundamental and applied biological sciences. Psychology Humans Microbiology Miscellaneous Mutant Proteins - genetics Mycobacteriology and Aerobic Actinomycetes Mycobacterium tuberculosis Mycobacterium tuberculosis - drug effects Mycobacterium tuberculosis - genetics Mycobacterium tuberculosis - isolation & purification Polymerase Chain Reaction - methods Sensitivity and Specificity Time Factors Tuberculosis - diagnosis Tuberculosis - microbiology |
title | Rapid Detection of Mycobacterium tuberculosis Complex and Rifampin Resistance in Smear-Negative Clinical Samples by Use of an Integrated Real-Time PCR Method |
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