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comparison of otolith microchemistry and otolith shape analysis for the study of spatial variation in a deep-sea teleost, Coryphaenoides rupestris
The study of the morphological and chemical characteristics of otoliths have recently been proposed as complementary tools for fish stock identification. However, their effectiveness remains to be fully assessed, especially in species whose life history is still poorly understood. The relative effic...
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Published in: | Environmental biology of fishes 2010-11, Vol.89 (3-4), p.591-605 |
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description | The study of the morphological and chemical characteristics of otoliths have recently been proposed as complementary tools for fish stock identification. However, their effectiveness remains to be fully assessed, especially in species whose life history is still poorly understood. The relative efficiency of otolith microchemistry and otolith shape analysis in discriminating samples of the deep-sea macrourid Coryphaenoides rupestris collected in different areas in the North Atlantic was examined. Otolith microchemistry based on LA/ICP-MS found significant differences in the concentrations of lithium, manganese and barium among sample sites. This allowed for very high classification accuracy (92%), when using discriminant function analysis. Otolith shape analysis based both on linear shape measurements and elliptical fourier analysis revealed a contrasting weak discrimination, with only 43% classification success. Otolith microchemistry appears to be a more effective tool in identifying individual fish from different locations. The implications for the study of population structure are discussed taking into account the limitations of the methodologies employed. |
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However, their effectiveness remains to be fully assessed, especially in species whose life history is still poorly understood. The relative efficiency of otolith microchemistry and otolith shape analysis in discriminating samples of the deep-sea macrourid Coryphaenoides rupestris collected in different areas in the North Atlantic was examined. Otolith microchemistry based on LA/ICP-MS found significant differences in the concentrations of lithium, manganese and barium among sample sites. This allowed for very high classification accuracy (92%), when using discriminant function analysis. Otolith shape analysis based both on linear shape measurements and elliptical fourier analysis revealed a contrasting weak discrimination, with only 43% classification success. Otolith microchemistry appears to be a more effective tool in identifying individual fish from different locations. The implications for the study of population structure are discussed taking into account the limitations of the methodologies employed.</description><identifier>ISSN: 0378-1909</identifier><identifier>EISSN: 1573-5133</identifier><identifier>DOI: 10.1007/s10641-010-9674-1</identifier><identifier>CODEN: EBFID3</identifier><language>eng</language><publisher>Dordrecht: Dordrecht : Springer Netherlands</publisher><subject>Agnatha. Pisces ; Animal and plant ecology ; Animal Systematics/Taxonomy/Biogeography ; Animal, plant and microbial ecology ; Animals ; Autoecology ; Barium ; Biochemistry ; Biological and medical sciences ; Biomedical and Life Sciences ; Comparative studies ; Coryphaenoides rupestris ; Deep sea ; Discriminant analysis ; Elliptic Fourier Analysis ; Environment ; Fish ; fisheries management ; Fourier analysis ; Freshwater & Marine Ecology ; Fundamental and applied biological sciences. Psychology ; ICP-MS ; Life history ; Life Sciences ; Lithium ; Manganese ; Nature Conservation ; North Atlantic ; Otoliths ; Population structure ; Population studies ; Research methodology ; Roundnose Grenadier ; Stock structure ; Teleostei ; trace elements ; Vertebrata ; Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution ; Zoology</subject><ispartof>Environmental biology of fishes, 2010-11, Vol.89 (3-4), p.591-605</ispartof><rights>Springer Science+Business Media B.V. 2010</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c499t-6a6a4fe34d201a494fdc9e5ee4d501585d93f78930e5bf991792a7c34098ea263</citedby><cites>FETCH-LOGICAL-c499t-6a6a4fe34d201a494fdc9e5ee4d501585d93f78930e5bf991792a7c34098ea263</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>309,310,314,780,784,789,790,23930,23931,25140,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=23441577$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Longmore, Craig</creatorcontrib><creatorcontrib>Fogarty, Kate</creatorcontrib><creatorcontrib>Neat, Francis</creatorcontrib><creatorcontrib>Brophy, Deirdre</creatorcontrib><creatorcontrib>Trueman, Clive</creatorcontrib><creatorcontrib>Milton, Andrew</creatorcontrib><creatorcontrib>Mariani, Stefano</creatorcontrib><title>comparison of otolith microchemistry and otolith shape analysis for the study of spatial variation in a deep-sea teleost, Coryphaenoides rupestris</title><title>Environmental biology of fishes</title><addtitle>Environ Biol Fish</addtitle><description>The study of the morphological and chemical characteristics of otoliths have recently been proposed as complementary tools for fish stock identification. However, their effectiveness remains to be fully assessed, especially in species whose life history is still poorly understood. The relative efficiency of otolith microchemistry and otolith shape analysis in discriminating samples of the deep-sea macrourid Coryphaenoides rupestris collected in different areas in the North Atlantic was examined. Otolith microchemistry based on LA/ICP-MS found significant differences in the concentrations of lithium, manganese and barium among sample sites. This allowed for very high classification accuracy (92%), when using discriminant function analysis. Otolith shape analysis based both on linear shape measurements and elliptical fourier analysis revealed a contrasting weak discrimination, with only 43% classification success. Otolith microchemistry appears to be a more effective tool in identifying individual fish from different locations. The implications for the study of population structure are discussed taking into account the limitations of the methodologies employed.</description><subject>Agnatha. Pisces</subject><subject>Animal and plant ecology</subject><subject>Animal Systematics/Taxonomy/Biogeography</subject><subject>Animal, plant and microbial ecology</subject><subject>Animals</subject><subject>Autoecology</subject><subject>Barium</subject><subject>Biochemistry</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Comparative studies</subject><subject>Coryphaenoides rupestris</subject><subject>Deep sea</subject><subject>Discriminant analysis</subject><subject>Elliptic Fourier Analysis</subject><subject>Environment</subject><subject>Fish</subject><subject>fisheries management</subject><subject>Fourier analysis</subject><subject>Freshwater & Marine Ecology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>ICP-MS</subject><subject>Life history</subject><subject>Life Sciences</subject><subject>Lithium</subject><subject>Manganese</subject><subject>Nature Conservation</subject><subject>North Atlantic</subject><subject>Otoliths</subject><subject>Population structure</subject><subject>Population studies</subject><subject>Research methodology</subject><subject>Roundnose Grenadier</subject><subject>Stock structure</subject><subject>Teleostei</subject><subject>trace elements</subject><subject>Vertebrata</subject><subject>Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution</subject><subject>Zoology</subject><issn>0378-1909</issn><issn>1573-5133</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><recordid>eNqFkt-K1TAQxosoeFx9AK8MgnhjNWnSprmUg_9gwQvd6zC2k22WnqZm2oW-hk_sHLqs4IVeJWS-7zfJfCmK50q-VVLad6RkY1QplSxdY02pHhQHVVtd1krrh8VBatuWykn3uHhCdCOldNbYQ_GrS6cZcqQ0iRREWtIYl0GcYpdTN-Ap0pI3AVN_X6IBZuQTGDeKJELKYhlQ0LL22xlBMywRRnHLVN4xN04CRI84l4QgFhwx0fJGHFPe5gFwSrFHEnmdkZtFelo8CjASPrtbL4qrjx--Hz-Xl18_fTm-vyw749xSNtCACahNX0kFxpnQdw5rRNPXUtVt3TsdbOu0xPpHcE5ZV4HttJGuRagafVG83rlzTj9X7u35tR2OI0yYVvKuadljK_1_pay01aoyrHz5l_ImrZlnRb6V1rSVtWec2kU8Y6KMwc85niBvXkl_TtPvaXpO05_T9Io9r-7AQB2MIcPURbo3VtoYjtuyrtp1xKXpGvOfC_wL_mI3BUgerjkDf_WNp6ol_xjbKqN_A5fiun0</recordid><startdate>201011</startdate><enddate>201011</enddate><creator>Longmore, Craig</creator><creator>Fogarty, Kate</creator><creator>Neat, Francis</creator><creator>Brophy, Deirdre</creator><creator>Trueman, Clive</creator><creator>Milton, Andrew</creator><creator>Mariani, Stefano</creator><general>Dordrecht : Springer Netherlands</general><general>Springer Netherlands</general><general>Springer</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QG</scope><scope>7QH</scope><scope>7SN</scope><scope>7ST</scope><scope>7TN</scope><scope>7UA</scope><scope>88A</scope><scope>8AO</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>GNUQQ</scope><scope>H95</scope><scope>HCIFZ</scope><scope>L.G</scope><scope>LK8</scope><scope>M7P</scope><scope>PATMY</scope><scope>PCBAR</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>SOI</scope></search><sort><creationdate>201011</creationdate><title>comparison of otolith microchemistry and otolith shape analysis for the study of spatial variation in a deep-sea teleost, Coryphaenoides rupestris</title><author>Longmore, Craig ; Fogarty, Kate ; Neat, Francis ; Brophy, Deirdre ; Trueman, Clive ; Milton, Andrew ; Mariani, Stefano</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c499t-6a6a4fe34d201a494fdc9e5ee4d501585d93f78930e5bf991792a7c34098ea263</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Agnatha. Pisces</topic><topic>Animal and plant ecology</topic><topic>Animal Systematics/Taxonomy/Biogeography</topic><topic>Animal, plant and microbial ecology</topic><topic>Animals</topic><topic>Autoecology</topic><topic>Barium</topic><topic>Biochemistry</topic><topic>Biological and medical sciences</topic><topic>Biomedical and Life Sciences</topic><topic>Comparative studies</topic><topic>Coryphaenoides rupestris</topic><topic>Deep sea</topic><topic>Discriminant analysis</topic><topic>Elliptic Fourier Analysis</topic><topic>Environment</topic><topic>Fish</topic><topic>fisheries management</topic><topic>Fourier analysis</topic><topic>Freshwater & Marine Ecology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>ICP-MS</topic><topic>Life history</topic><topic>Life Sciences</topic><topic>Lithium</topic><topic>Manganese</topic><topic>Nature Conservation</topic><topic>North Atlantic</topic><topic>Otoliths</topic><topic>Population structure</topic><topic>Population studies</topic><topic>Research methodology</topic><topic>Roundnose Grenadier</topic><topic>Stock structure</topic><topic>Teleostei</topic><topic>trace elements</topic><topic>Vertebrata</topic><topic>Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Longmore, Craig</creatorcontrib><creatorcontrib>Fogarty, Kate</creatorcontrib><creatorcontrib>Neat, Francis</creatorcontrib><creatorcontrib>Brophy, Deirdre</creatorcontrib><creatorcontrib>Trueman, Clive</creatorcontrib><creatorcontrib>Milton, Andrew</creatorcontrib><creatorcontrib>Mariani, Stefano</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Aqualine</collection><collection>Ecology Abstracts</collection><collection>Environment Abstracts</collection><collection>Oceanic Abstracts</collection><collection>Water Resources Abstracts</collection><collection>Biology Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Earth, Atmospheric & Aquatic Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>ProQuest Central Student</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>ProQuest Biological Science Collection</collection><collection>ProQuest Biological Science Journals</collection><collection>Environmental Science Database</collection><collection>Earth, Atmospheric & Aquatic Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>Environment Abstracts</collection><jtitle>Environmental biology of fishes</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Longmore, Craig</au><au>Fogarty, Kate</au><au>Neat, Francis</au><au>Brophy, Deirdre</au><au>Trueman, Clive</au><au>Milton, Andrew</au><au>Mariani, Stefano</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>comparison of otolith microchemistry and otolith shape analysis for the study of spatial variation in a deep-sea teleost, Coryphaenoides rupestris</atitle><jtitle>Environmental biology of fishes</jtitle><stitle>Environ Biol Fish</stitle><date>2010-11</date><risdate>2010</risdate><volume>89</volume><issue>3-4</issue><spage>591</spage><epage>605</epage><pages>591-605</pages><issn>0378-1909</issn><eissn>1573-5133</eissn><coden>EBFID3</coden><abstract>The study of the morphological and chemical characteristics of otoliths have recently been proposed as complementary tools for fish stock identification. However, their effectiveness remains to be fully assessed, especially in species whose life history is still poorly understood. The relative efficiency of otolith microchemistry and otolith shape analysis in discriminating samples of the deep-sea macrourid Coryphaenoides rupestris collected in different areas in the North Atlantic was examined. Otolith microchemistry based on LA/ICP-MS found significant differences in the concentrations of lithium, manganese and barium among sample sites. This allowed for very high classification accuracy (92%), when using discriminant function analysis. Otolith shape analysis based both on linear shape measurements and elliptical fourier analysis revealed a contrasting weak discrimination, with only 43% classification success. Otolith microchemistry appears to be a more effective tool in identifying individual fish from different locations. The implications for the study of population structure are discussed taking into account the limitations of the methodologies employed.</abstract><cop>Dordrecht</cop><pub>Dordrecht : Springer Netherlands</pub><doi>10.1007/s10641-010-9674-1</doi><tpages>15</tpages></addata></record> |
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subjects | Agnatha. Pisces Animal and plant ecology Animal Systematics/Taxonomy/Biogeography Animal, plant and microbial ecology Animals Autoecology Barium Biochemistry Biological and medical sciences Biomedical and Life Sciences Comparative studies Coryphaenoides rupestris Deep sea Discriminant analysis Elliptic Fourier Analysis Environment Fish fisheries management Fourier analysis Freshwater & Marine Ecology Fundamental and applied biological sciences. Psychology ICP-MS Life history Life Sciences Lithium Manganese Nature Conservation North Atlantic Otoliths Population structure Population studies Research methodology Roundnose Grenadier Stock structure Teleostei trace elements Vertebrata Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution Zoology |
title | comparison of otolith microchemistry and otolith shape analysis for the study of spatial variation in a deep-sea teleost, Coryphaenoides rupestris |
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