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Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes
Nicotinamide mononucleotide adenylyltransferase (NMNATase) catalyzes the linking of NMN(+) or NaMN(+) with ATP, which in all organisms is one of the common step in the synthesis of the ubiquitous coenzyme NAD(+), via both de novo and salvage biosynthetic pathways. The structure of Methanobacterium t...
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Published in: | The Journal of biological chemistry 2001-03, Vol.276 (10), p.7225 |
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creator | Saridakis, V Christendat, D Kimber, M S Dharamsi, A Edwards, A M Pai, E F |
description | Nicotinamide mononucleotide adenylyltransferase (NMNATase) catalyzes the linking of NMN(+) or NaMN(+) with ATP, which in all organisms is one of the common step in the synthesis of the ubiquitous coenzyme NAD(+), via both de novo and salvage biosynthetic pathways. The structure of Methanobacterium thermoautotrophicum NMNATase determined using multiwavelength anomalous dispersion phasing revealed a nucleotide-binding fold common to nucleotidyltransferase proteins. An NAD(+) molecule and a sulfate ion were bound in the active site allowing the identification of residues involved in product binding. In addition, the role of the conserved (16)HXGH(19) active site motif in catalysis was probed by mutagenic, enzymatic and crystallographic techniques, including the characterization of an NMN(+)/SO4(2-) complex of mutant H19A NMNATase. |
doi_str_mv | 10.1074/jbc.M008810200 |
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The structure of Methanobacterium thermoautotrophicum NMNATase determined using multiwavelength anomalous dispersion phasing revealed a nucleotide-binding fold common to nucleotidyltransferase proteins. An NAD(+) molecule and a sulfate ion were bound in the active site allowing the identification of residues involved in product binding. In addition, the role of the conserved (16)HXGH(19) active site motif in catalysis was probed by mutagenic, enzymatic and crystallographic techniques, including the characterization of an NMN(+)/SO4(2-) complex of mutant H19A NMNATase.</description><identifier>ISSN: 0021-9258</identifier><identifier>DOI: 10.1074/jbc.M008810200</identifier><identifier>PMID: 11063748</identifier><language>eng</language><publisher>United States</publisher><subject>Amino Acid Sequence ; Binding Sites ; Catalysis ; Catalytic Domain ; Chromatography, Gel ; Cloning, Molecular ; Crystallography, X-Ray ; Ligands ; Methanobacterium - enzymology ; Models, Chemical ; Models, Molecular ; Molecular Sequence Data ; Mutagenesis ; Mutagenesis, Site-Directed ; Mutation ; NAD - biosynthesis ; Nicotinamide-Nucleotide Adenylyltransferase - chemistry ; Nicotinamide-Nucleotide Adenylyltransferase - genetics ; Protein Binding ; Protein Conformation ; Protein Structure, Secondary ; Sequence Homology, Amino Acid</subject><ispartof>The Journal of biological chemistry, 2001-03, Vol.276 (10), p.7225</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11063748$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Saridakis, V</creatorcontrib><creatorcontrib>Christendat, D</creatorcontrib><creatorcontrib>Kimber, M S</creatorcontrib><creatorcontrib>Dharamsi, A</creatorcontrib><creatorcontrib>Edwards, A M</creatorcontrib><creatorcontrib>Pai, E F</creatorcontrib><title>Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes</title><title>The Journal of biological chemistry</title><addtitle>J Biol Chem</addtitle><description>Nicotinamide mononucleotide adenylyltransferase (NMNATase) catalyzes the linking of NMN(+) or NaMN(+) with ATP, which in all organisms is one of the common step in the synthesis of the ubiquitous coenzyme NAD(+), via both de novo and salvage biosynthetic pathways. The structure of Methanobacterium thermoautotrophicum NMNATase determined using multiwavelength anomalous dispersion phasing revealed a nucleotide-binding fold common to nucleotidyltransferase proteins. An NAD(+) molecule and a sulfate ion were bound in the active site allowing the identification of residues involved in product binding. 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Christendat, D ; Kimber, M S ; Dharamsi, A ; Edwards, A M ; Pai, E F</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p207t-7994be69776f69ee78904e6fc72a55c3eed3943cd2e1934636feaff900c315433</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>Amino Acid Sequence</topic><topic>Binding Sites</topic><topic>Catalysis</topic><topic>Catalytic Domain</topic><topic>Chromatography, Gel</topic><topic>Cloning, Molecular</topic><topic>Crystallography, X-Ray</topic><topic>Ligands</topic><topic>Methanobacterium - enzymology</topic><topic>Models, Chemical</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>Mutagenesis</topic><topic>Mutagenesis, Site-Directed</topic><topic>Mutation</topic><topic>NAD - biosynthesis</topic><topic>Nicotinamide-Nucleotide Adenylyltransferase - chemistry</topic><topic>Nicotinamide-Nucleotide Adenylyltransferase - genetics</topic><topic>Protein Binding</topic><topic>Protein Conformation</topic><topic>Protein Structure, Secondary</topic><topic>Sequence Homology, Amino Acid</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Saridakis, V</creatorcontrib><creatorcontrib>Christendat, D</creatorcontrib><creatorcontrib>Kimber, M S</creatorcontrib><creatorcontrib>Dharamsi, A</creatorcontrib><creatorcontrib>Edwards, A M</creatorcontrib><creatorcontrib>Pai, E F</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><jtitle>The Journal of biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Saridakis, V</au><au>Christendat, D</au><au>Kimber, M S</au><au>Dharamsi, A</au><au>Edwards, A M</au><au>Pai, E F</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes</atitle><jtitle>The Journal of biological chemistry</jtitle><addtitle>J Biol Chem</addtitle><date>2001-03-09</date><risdate>2001</risdate><volume>276</volume><issue>10</issue><spage>7225</spage><pages>7225-</pages><issn>0021-9258</issn><abstract>Nicotinamide mononucleotide adenylyltransferase (NMNATase) catalyzes the linking of NMN(+) or NaMN(+) with ATP, which in all organisms is one of the common step in the synthesis of the ubiquitous coenzyme NAD(+), via both de novo and salvage biosynthetic pathways. The structure of Methanobacterium thermoautotrophicum NMNATase determined using multiwavelength anomalous dispersion phasing revealed a nucleotide-binding fold common to nucleotidyltransferase proteins. An NAD(+) molecule and a sulfate ion were bound in the active site allowing the identification of residues involved in product binding. In addition, the role of the conserved (16)HXGH(19) active site motif in catalysis was probed by mutagenic, enzymatic and crystallographic techniques, including the characterization of an NMN(+)/SO4(2-) complex of mutant H19A NMNATase.</abstract><cop>United States</cop><pmid>11063748</pmid><doi>10.1074/jbc.M008810200</doi><oa>free_for_read</oa></addata></record> |
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source | Elsevier ScienceDirect Journals |
subjects | Amino Acid Sequence Binding Sites Catalysis Catalytic Domain Chromatography, Gel Cloning, Molecular Crystallography, X-Ray Ligands Methanobacterium - enzymology Models, Chemical Models, Molecular Molecular Sequence Data Mutagenesis Mutagenesis, Site-Directed Mutation NAD - biosynthesis Nicotinamide-Nucleotide Adenylyltransferase - chemistry Nicotinamide-Nucleotide Adenylyltransferase - genetics Protein Binding Protein Conformation Protein Structure, Secondary Sequence Homology, Amino Acid |
title | Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes |
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