Isolation, Diversity, and Antimicrobial Activity of Rare Actinobacteria from Medicinal Plants of Tropical Rain Forests in Xishuangbanna, China

• Published in: Applied and Environmental Microbiology 2009-10, Vol.75 (19), p.6176-6186
• Main Authors: Qin, Sheng, Li, Jie, Chen, Hua-Hong, Zhao, Guo-Zhen, Zhu, Wen-Yong, Jiang, Cheng-Lin, Xu, Li-Hua, Li, Wen-Jun
• Format: Article
• Language: English
• Subjects: Actinobacteria; Actinobacteria - classification; Actinobacteria - genetics; Actinobacteria - isolation & purification; Actinobacteria - physiology; Anti-Infective Agents - metabolism; Anti-Infective Agents - pharmacology; Antimicrobial activity; Bacteria; Bacteriology; Biodiversity; Biological and medical sciences; China; Cluster Analysis; DNA, Bacterial - chemistry; DNA, Bacterial - genetics; DNA, Ribosomal - chemistry; DNA, Ribosomal - genetics; Fundamental and applied biological sciences. Psychology; Genes; Herbal medicine; Microbial Ecology; Microbial Sensitivity Tests; Microbiology; Molecular Sequence Data; Phylogeny; Plants, Medicinal - microbiology; Rainforests; Ribonucleic acid; RNA; RNA, Ribosomal, 16S - genetics; Sequence Analysis, DNA; Trees; Tropical Climate
• ISSN: 0099-2240; 1098-5336; 1098-6596
• DOI: 10.1128/aem.01034-09

Endophytic actinobacteria are relatively unexplored as potential sources of novel species and novel natural products for medical and commercial exploitation. Xishuangbanna is recognized throughout the world for its diverse flora, especially the rain forest plants, many of which have indigenous pharmaceutical histories. However, little is known about the endophytic actinobacteria of this tropical area. In this work, we studied the diversity of actinobacteria isolated from medicinal plants collected from tropical rain forests in Xishuangbanna. By the use of different selective isolation media and methods, a total of 2,174 actinobacteria were isolated. Forty-six isolates were selected on the basis of their morphologies on different media and were further characterized by 16S rRNA gene sequencing. The results showed an unexpected level of diversity, with 32 different genera. To our knowledge, this is the first report describing the isolation of Saccharopolyspora, Dietzia, Blastococcus, Dactylosporangium, Promicromonospora, Oerskovia, Actinocorallia, and Jiangella species from endophytic environments. At least 19 isolates are considered novel taxa by our current research. In addition, all 46 isolates were tested for antimicrobial activity and were screened for the presence of genes encoding polyketide synthetases and nonribosomal peptide synthetases. The results confirm that the medicinal plants of Xishuangbanna represent an extremely rich reservoir for the isolation of a significant diversity of actinobacteria, including novel species, that are potential sources for the discovery of biologically active compounds.