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Prediction of clonogenic cell survival curves based on the number of residual DNA double strand breaks measured by gammaH2AX staining
To assess the potential of using the residual phosphorylation of histone H2AX (gammaH2AX) after irradiation as a marker of radiosensitivity in vitro. Confluent cell cultures of FaDu and SKX human squamous cell carcinoma lines were irradiated with graded single doses. Twenty-four hours after irradiat...
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Published in: | International journal of radiation biology 2009-11, Vol.85 (11), p.1032 |
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container_title | International journal of radiation biology |
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creator | Menegakis, Apostolos Yaromina, Ala Eicheler, Wolfgang Dörfler, Annegret Beuthien-Baumann, Bettina Thames, Howard D Baumann, Michael Krause, Mechthild |
description | To assess the potential of using the residual phosphorylation of histone H2AX (gammaH2AX) after irradiation as a marker of radiosensitivity in vitro.
Confluent cell cultures of FaDu and SKX human squamous cell carcinoma lines were irradiated with graded single doses. Twenty-four hours after irradiation cells were seeded for standard colony forming assay (CFA). In parallel, staining for gammaH2AX was performed to visualise the residual foci.
In the CFA, FaDu showed a higher radioresistance than SKX. After analysis of the residual foci data, we constructed 'predicted' survival curves using two different methods. First, the proportion of nuclei with |
doi_str_mv | 10.3109/09553000903242149 |
format | article |
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Confluent cell cultures of FaDu and SKX human squamous cell carcinoma lines were irradiated with graded single doses. Twenty-four hours after irradiation cells were seeded for standard colony forming assay (CFA). In parallel, staining for gammaH2AX was performed to visualise the residual foci.
In the CFA, FaDu showed a higher radioresistance than SKX. After analysis of the residual foci data, we constructed 'predicted' survival curves using two different methods. First, the proportion of nuclei with <3 foci was found to correlate closely with the observed surviving fraction (SF) in FaDu, with a slight overestimation of the true SF in SKX. Second, there was a strong linear correlation of the mean number of residual foci and observed -lnSF. Based on regression analysis, we calculated the SF for both cell lines based on the mean number of residual gammaH2AX foci. This second approach again led to a good correlation of predicted and observed SF values in FaDu and a (slight) overestimation in SKX.
In the two cell lines investigated the mean number of residual foci of gammaH2AX can be used to predict differences in the radiation dose response relationship in vitro.</description><identifier>EISSN: 1362-3095</identifier><identifier>DOI: 10.3109/09553000903242149</identifier><identifier>PMID: 19895280</identifier><language>eng</language><publisher>England</publisher><subject>Carcinoma, Squamous Cell - metabolism ; Carcinoma, Squamous Cell - pathology ; Carcinoma, Squamous Cell - radiotherapy ; Cell Line, Tumor ; Cell Survival - radiation effects ; DNA Breaks, Double-Stranded ; DNA, Neoplasm - radiation effects ; Dose-Response Relationship, Radiation ; Histones - metabolism ; Humans ; Immunohistochemistry ; Radiation Tolerance ; Tumor Stem Cell Assay</subject><ispartof>International journal of radiation biology, 2009-11, Vol.85 (11), p.1032</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19895280$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Menegakis, Apostolos</creatorcontrib><creatorcontrib>Yaromina, Ala</creatorcontrib><creatorcontrib>Eicheler, Wolfgang</creatorcontrib><creatorcontrib>Dörfler, Annegret</creatorcontrib><creatorcontrib>Beuthien-Baumann, Bettina</creatorcontrib><creatorcontrib>Thames, Howard D</creatorcontrib><creatorcontrib>Baumann, Michael</creatorcontrib><creatorcontrib>Krause, Mechthild</creatorcontrib><title>Prediction of clonogenic cell survival curves based on the number of residual DNA double strand breaks measured by gammaH2AX staining</title><title>International journal of radiation biology</title><addtitle>Int J Radiat Biol</addtitle><description>To assess the potential of using the residual phosphorylation of histone H2AX (gammaH2AX) after irradiation as a marker of radiosensitivity in vitro.
Confluent cell cultures of FaDu and SKX human squamous cell carcinoma lines were irradiated with graded single doses. Twenty-four hours after irradiation cells were seeded for standard colony forming assay (CFA). In parallel, staining for gammaH2AX was performed to visualise the residual foci.
In the CFA, FaDu showed a higher radioresistance than SKX. After analysis of the residual foci data, we constructed 'predicted' survival curves using two different methods. First, the proportion of nuclei with <3 foci was found to correlate closely with the observed surviving fraction (SF) in FaDu, with a slight overestimation of the true SF in SKX. Second, there was a strong linear correlation of the mean number of residual foci and observed -lnSF. Based on regression analysis, we calculated the SF for both cell lines based on the mean number of residual gammaH2AX foci. This second approach again led to a good correlation of predicted and observed SF values in FaDu and a (slight) overestimation in SKX.
In the two cell lines investigated the mean number of residual foci of gammaH2AX can be used to predict differences in the radiation dose response relationship in vitro.</description><subject>Carcinoma, Squamous Cell - metabolism</subject><subject>Carcinoma, Squamous Cell - pathology</subject><subject>Carcinoma, Squamous Cell - radiotherapy</subject><subject>Cell Line, Tumor</subject><subject>Cell Survival - radiation effects</subject><subject>DNA Breaks, Double-Stranded</subject><subject>DNA, Neoplasm - radiation effects</subject><subject>Dose-Response Relationship, Radiation</subject><subject>Histones - metabolism</subject><subject>Humans</subject><subject>Immunohistochemistry</subject><subject>Radiation Tolerance</subject><subject>Tumor Stem Cell Assay</subject><issn>1362-3095</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><recordid>eNo1kM1KAzEcxIMgtlYfwIvkBVaT_De7ybHUjwpFBT14K8nmnxrdj5J0C30A39uIepqB-c0chpALzq6AM33NtJTAGNMMRCl4qY_IlEMlCsjJhJym9JFTwUCdkAnXSkuh2JR8PUd0odmFoaeDp0079MMG-9DQBtuWpjHuw960tMkGE7UmoaOZ3b0j7cfOYvypRUzBjRm7eZxTN4y2RZp20fSO2ojmM9EOTd7KXXugG9N1Zinmb5kxoQ_95owce9MmPP_TGXm5u31dLIvV0_3DYr4qtlKyQtXKKVuirRUyV1qoKiZVqRWA5txb5CCUr70Ar5Qy1uu6lBwsF5phJWBGLn9Xt6Pt0K23MXQmHtb_b8A39YJguw</recordid><startdate>200911</startdate><enddate>200911</enddate><creator>Menegakis, Apostolos</creator><creator>Yaromina, Ala</creator><creator>Eicheler, Wolfgang</creator><creator>Dörfler, Annegret</creator><creator>Beuthien-Baumann, Bettina</creator><creator>Thames, Howard D</creator><creator>Baumann, Michael</creator><creator>Krause, Mechthild</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope></search><sort><creationdate>200911</creationdate><title>Prediction of clonogenic cell survival curves based on the number of residual DNA double strand breaks measured by gammaH2AX staining</title><author>Menegakis, Apostolos ; Yaromina, Ala ; Eicheler, Wolfgang ; Dörfler, Annegret ; Beuthien-Baumann, Bettina ; Thames, Howard D ; Baumann, Michael ; Krause, Mechthild</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p550-878d8b4eb78e0d4b36605849833911fbe1328f7f23f888abf974513b1290e623</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Carcinoma, Squamous Cell - metabolism</topic><topic>Carcinoma, Squamous Cell - pathology</topic><topic>Carcinoma, Squamous Cell - radiotherapy</topic><topic>Cell Line, Tumor</topic><topic>Cell Survival - radiation effects</topic><topic>DNA Breaks, Double-Stranded</topic><topic>DNA, Neoplasm - radiation effects</topic><topic>Dose-Response Relationship, Radiation</topic><topic>Histones - metabolism</topic><topic>Humans</topic><topic>Immunohistochemistry</topic><topic>Radiation Tolerance</topic><topic>Tumor Stem Cell Assay</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Menegakis, Apostolos</creatorcontrib><creatorcontrib>Yaromina, Ala</creatorcontrib><creatorcontrib>Eicheler, Wolfgang</creatorcontrib><creatorcontrib>Dörfler, Annegret</creatorcontrib><creatorcontrib>Beuthien-Baumann, Bettina</creatorcontrib><creatorcontrib>Thames, Howard D</creatorcontrib><creatorcontrib>Baumann, Michael</creatorcontrib><creatorcontrib>Krause, Mechthild</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><jtitle>International journal of radiation biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Menegakis, Apostolos</au><au>Yaromina, Ala</au><au>Eicheler, Wolfgang</au><au>Dörfler, Annegret</au><au>Beuthien-Baumann, Bettina</au><au>Thames, Howard D</au><au>Baumann, Michael</au><au>Krause, Mechthild</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Prediction of clonogenic cell survival curves based on the number of residual DNA double strand breaks measured by gammaH2AX staining</atitle><jtitle>International journal of radiation biology</jtitle><addtitle>Int J Radiat Biol</addtitle><date>2009-11</date><risdate>2009</risdate><volume>85</volume><issue>11</issue><spage>1032</spage><pages>1032-</pages><eissn>1362-3095</eissn><abstract>To assess the potential of using the residual phosphorylation of histone H2AX (gammaH2AX) after irradiation as a marker of radiosensitivity in vitro.
Confluent cell cultures of FaDu and SKX human squamous cell carcinoma lines were irradiated with graded single doses. Twenty-four hours after irradiation cells were seeded for standard colony forming assay (CFA). In parallel, staining for gammaH2AX was performed to visualise the residual foci.
In the CFA, FaDu showed a higher radioresistance than SKX. After analysis of the residual foci data, we constructed 'predicted' survival curves using two different methods. First, the proportion of nuclei with <3 foci was found to correlate closely with the observed surviving fraction (SF) in FaDu, with a slight overestimation of the true SF in SKX. Second, there was a strong linear correlation of the mean number of residual foci and observed -lnSF. Based on regression analysis, we calculated the SF for both cell lines based on the mean number of residual gammaH2AX foci. This second approach again led to a good correlation of predicted and observed SF values in FaDu and a (slight) overestimation in SKX.
In the two cell lines investigated the mean number of residual foci of gammaH2AX can be used to predict differences in the radiation dose response relationship in vitro.</abstract><cop>England</cop><pmid>19895280</pmid><doi>10.3109/09553000903242149</doi></addata></record> |
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source | Taylor and Francis:Jisc Collections:Taylor and Francis Read and Publish Agreement 2024-2025:Medical Collection (Reading list) |
subjects | Carcinoma, Squamous Cell - metabolism Carcinoma, Squamous Cell - pathology Carcinoma, Squamous Cell - radiotherapy Cell Line, Tumor Cell Survival - radiation effects DNA Breaks, Double-Stranded DNA, Neoplasm - radiation effects Dose-Response Relationship, Radiation Histones - metabolism Humans Immunohistochemistry Radiation Tolerance Tumor Stem Cell Assay |
title | Prediction of clonogenic cell survival curves based on the number of residual DNA double strand breaks measured by gammaH2AX staining |
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