Loading…

Differential laser-induced perturbation Raman spectroscopy: a comparison with Raman spectroscopy for analysis and classification of amino acids and dipeptides

Differential-laser induced perturbation spectroscopy (DLIPS) is a new spectral analysis technique for classification and identification, with key potential applications for analysis of complex biomolecular systems. DLIPS takes advantage of the complex ultraviolet (UV) laser-material interactions bas...

Full description

Saved in:
Bibliographic Details
Published in:Journal of biomedical optics 2015-04, Vol.20 (4), p.047006-047006
Main Authors: Oztekin, Erman K, Smith, Sarah E, Hahn, David W
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c460t-f9054f89e444a9bf95701930f2eb56d9fbe8948868f524ceb5694e7b30e69e163
cites cdi_FETCH-LOGICAL-c460t-f9054f89e444a9bf95701930f2eb56d9fbe8948868f524ceb5694e7b30e69e163
container_end_page 047006
container_issue 4
container_start_page 047006
container_title Journal of biomedical optics
container_volume 20
creator Oztekin, Erman K
Smith, Sarah E
Hahn, David W
description Differential-laser induced perturbation spectroscopy (DLIPS) is a new spectral analysis technique for classification and identification, with key potential applications for analysis of complex biomolecular systems. DLIPS takes advantage of the complex ultraviolet (UV) laser-material interactions based on difference spectroscopy by coupling low intensity UV laser perturbation with a traditional spectroscopy probe. Here, we quantify the DLIPS performance using a Raman scattering probe in classification of basic constituents of collagenous tissues, namely, the amino acids glycine, l-proline, and l-alanine, and the dipeptides glycine-glycine, glycine-alanine and glycine-proline and compare the performance to a traditional Raman spectroscopy probe via several multivariate analyses. We find that the DLIPS approach yields an ∼40% improvement in discrimination among these tissue building blocks. The effects of the 193-nm perturbation laser are further examined by assessing the photodestruction of targeted material molecular bonds. The DLIPS method with a Raman probe holds promise for future tissue diagnosis, either as a stand-alone technique or as part of an orthogonal biosensing scheme.
doi_str_mv 10.1117/1.JBO.20.4.047006
format article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmed_primary_25905445</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1675878205</sourcerecordid><originalsourceid>FETCH-LOGICAL-c460t-f9054f89e444a9bf95701930f2eb56d9fbe8948868f524ceb5694e7b30e69e163</originalsourceid><addsrcrecordid>eNp9kcFu1TAQRSNERUvhA9ggL9kk2Inj2OxKS4GqUhEqa8uxx8JVEhvbEXp8DN-KHyldtBWrGY3PvdbMrapXBDeEkOEtaS7eXzUtbmiD6YAxe1IdkZ7hum05eVp6zLu6Y4wfVs9TusEYcybYs-qw7QXuKe2Pqt9nzlqIsGSnJjSpBLF2i1k1GBQg5jWOKju_oK9qVgtKAXSOPmkfdu-QQtrPQUWXCvDT5e-PUMj6iNSipl1yqTQG6fJLctbpzdhbpGa3eKS0MxthXICQnYH0ojqwakrw8rYeV9_OP1yffqovrz5-Pj25rDVlONd2v47lAiilSoxW9AMmosO2hbFnRtgRuKCcM277lur9UFAYxg4DE0BYd1y92XxD9D9WSFnOLmmYJrWAX5MkbOj5wFvcF5RsqC4bpghWhuhmFXeSYLmPRRJZYpEtllRusRTN61v7dZzB3Cn-5VCAZgNScCBv_BrLxdJ_Ha8fE9xhv1y4r_k7O4nZ6Qm-nJ0_eA7Gdn8AfzK16A</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1675878205</pqid></control><display><type>article</type><title>Differential laser-induced perturbation Raman spectroscopy: a comparison with Raman spectroscopy for analysis and classification of amino acids and dipeptides</title><source>SPIE Digital Library (Journals)</source><source>PubMed Central</source><creator>Oztekin, Erman K ; Smith, Sarah E ; Hahn, David W</creator><creatorcontrib>Oztekin, Erman K ; Smith, Sarah E ; Hahn, David W</creatorcontrib><description>Differential-laser induced perturbation spectroscopy (DLIPS) is a new spectral analysis technique for classification and identification, with key potential applications for analysis of complex biomolecular systems. DLIPS takes advantage of the complex ultraviolet (UV) laser-material interactions based on difference spectroscopy by coupling low intensity UV laser perturbation with a traditional spectroscopy probe. Here, we quantify the DLIPS performance using a Raman scattering probe in classification of basic constituents of collagenous tissues, namely, the amino acids glycine, l-proline, and l-alanine, and the dipeptides glycine-glycine, glycine-alanine and glycine-proline and compare the performance to a traditional Raman spectroscopy probe via several multivariate analyses. We find that the DLIPS approach yields an ∼40% improvement in discrimination among these tissue building blocks. The effects of the 193-nm perturbation laser are further examined by assessing the photodestruction of targeted material molecular bonds. The DLIPS method with a Raman probe holds promise for future tissue diagnosis, either as a stand-alone technique or as part of an orthogonal biosensing scheme.</description><identifier>ISSN: 1083-3668</identifier><identifier>EISSN: 1560-2281</identifier><identifier>DOI: 10.1117/1.JBO.20.4.047006</identifier><identifier>PMID: 25905445</identifier><language>eng</language><publisher>United States: Society of Photo-Optical Instrumentation Engineers</publisher><subject>Algorithms ; Amino Acids - analysis ; Amino Acids - chemistry ; Amino Acids - radiation effects ; Dipeptides - analysis ; Dipeptides - chemistry ; Dipeptides - radiation effects ; Lasers ; Peptide Mapping - methods ; Reproducibility of Results ; Sensitivity and Specificity ; Spectrum Analysis, Raman - instrumentation ; Spectrum Analysis, Raman - methods</subject><ispartof>Journal of biomedical optics, 2015-04, Vol.20 (4), p.047006-047006</ispartof><rights>The Authors. Published by SPIE under a Creative Commons Attribution 3.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c460t-f9054f89e444a9bf95701930f2eb56d9fbe8948868f524ceb5694e7b30e69e163</citedby><cites>FETCH-LOGICAL-c460t-f9054f89e444a9bf95701930f2eb56d9fbe8948868f524ceb5694e7b30e69e163</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.spiedigitallibrary.org/journalArticle/Download?urlId=10.1117/1.JBO.20.4.047006$$EPDF$$P50$$Gspie$$Hfree_for_read</linktopdf><linktohtml>$$Uhttp://www.dx.doi.org/10.1117/1.JBO.20.4.047006$$EHTML$$P50$$Gspie$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,24043,27924,27925,55379,55380</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25905445$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Oztekin, Erman K</creatorcontrib><creatorcontrib>Smith, Sarah E</creatorcontrib><creatorcontrib>Hahn, David W</creatorcontrib><title>Differential laser-induced perturbation Raman spectroscopy: a comparison with Raman spectroscopy for analysis and classification of amino acids and dipeptides</title><title>Journal of biomedical optics</title><addtitle>J. Biomed. Opt</addtitle><description>Differential-laser induced perturbation spectroscopy (DLIPS) is a new spectral analysis technique for classification and identification, with key potential applications for analysis of complex biomolecular systems. DLIPS takes advantage of the complex ultraviolet (UV) laser-material interactions based on difference spectroscopy by coupling low intensity UV laser perturbation with a traditional spectroscopy probe. Here, we quantify the DLIPS performance using a Raman scattering probe in classification of basic constituents of collagenous tissues, namely, the amino acids glycine, l-proline, and l-alanine, and the dipeptides glycine-glycine, glycine-alanine and glycine-proline and compare the performance to a traditional Raman spectroscopy probe via several multivariate analyses. We find that the DLIPS approach yields an ∼40% improvement in discrimination among these tissue building blocks. The effects of the 193-nm perturbation laser are further examined by assessing the photodestruction of targeted material molecular bonds. The DLIPS method with a Raman probe holds promise for future tissue diagnosis, either as a stand-alone technique or as part of an orthogonal biosensing scheme.</description><subject>Algorithms</subject><subject>Amino Acids - analysis</subject><subject>Amino Acids - chemistry</subject><subject>Amino Acids - radiation effects</subject><subject>Dipeptides - analysis</subject><subject>Dipeptides - chemistry</subject><subject>Dipeptides - radiation effects</subject><subject>Lasers</subject><subject>Peptide Mapping - methods</subject><subject>Reproducibility of Results</subject><subject>Sensitivity and Specificity</subject><subject>Spectrum Analysis, Raman - instrumentation</subject><subject>Spectrum Analysis, Raman - methods</subject><issn>1083-3668</issn><issn>1560-2281</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNp9kcFu1TAQRSNERUvhA9ggL9kk2Inj2OxKS4GqUhEqa8uxx8JVEhvbEXp8DN-KHyldtBWrGY3PvdbMrapXBDeEkOEtaS7eXzUtbmiD6YAxe1IdkZ7hum05eVp6zLu6Y4wfVs9TusEYcybYs-qw7QXuKe2Pqt9nzlqIsGSnJjSpBLF2i1k1GBQg5jWOKju_oK9qVgtKAXSOPmkfdu-QQtrPQUWXCvDT5e-PUMj6iNSipl1yqTQG6fJLctbpzdhbpGa3eKS0MxthXICQnYH0ojqwakrw8rYeV9_OP1yffqovrz5-Pj25rDVlONd2v47lAiilSoxW9AMmosO2hbFnRtgRuKCcM277lur9UFAYxg4DE0BYd1y92XxD9D9WSFnOLmmYJrWAX5MkbOj5wFvcF5RsqC4bpghWhuhmFXeSYLmPRRJZYpEtllRusRTN61v7dZzB3Cn-5VCAZgNScCBv_BrLxdJ_Ha8fE9xhv1y4r_k7O4nZ6Qm-nJ0_eA7Gdn8AfzK16A</recordid><startdate>20150401</startdate><enddate>20150401</enddate><creator>Oztekin, Erman K</creator><creator>Smith, Sarah E</creator><creator>Hahn, David W</creator><general>Society of Photo-Optical Instrumentation Engineers</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20150401</creationdate><title>Differential laser-induced perturbation Raman spectroscopy: a comparison with Raman spectroscopy for analysis and classification of amino acids and dipeptides</title><author>Oztekin, Erman K ; Smith, Sarah E ; Hahn, David W</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c460t-f9054f89e444a9bf95701930f2eb56d9fbe8948868f524ceb5694e7b30e69e163</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Algorithms</topic><topic>Amino Acids - analysis</topic><topic>Amino Acids - chemistry</topic><topic>Amino Acids - radiation effects</topic><topic>Dipeptides - analysis</topic><topic>Dipeptides - chemistry</topic><topic>Dipeptides - radiation effects</topic><topic>Lasers</topic><topic>Peptide Mapping - methods</topic><topic>Reproducibility of Results</topic><topic>Sensitivity and Specificity</topic><topic>Spectrum Analysis, Raman - instrumentation</topic><topic>Spectrum Analysis, Raman - methods</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Oztekin, Erman K</creatorcontrib><creatorcontrib>Smith, Sarah E</creatorcontrib><creatorcontrib>Hahn, David W</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of biomedical optics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Oztekin, Erman K</au><au>Smith, Sarah E</au><au>Hahn, David W</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Differential laser-induced perturbation Raman spectroscopy: a comparison with Raman spectroscopy for analysis and classification of amino acids and dipeptides</atitle><jtitle>Journal of biomedical optics</jtitle><addtitle>J. Biomed. Opt</addtitle><date>2015-04-01</date><risdate>2015</risdate><volume>20</volume><issue>4</issue><spage>047006</spage><epage>047006</epage><pages>047006-047006</pages><issn>1083-3668</issn><eissn>1560-2281</eissn><abstract>Differential-laser induced perturbation spectroscopy (DLIPS) is a new spectral analysis technique for classification and identification, with key potential applications for analysis of complex biomolecular systems. DLIPS takes advantage of the complex ultraviolet (UV) laser-material interactions based on difference spectroscopy by coupling low intensity UV laser perturbation with a traditional spectroscopy probe. Here, we quantify the DLIPS performance using a Raman scattering probe in classification of basic constituents of collagenous tissues, namely, the amino acids glycine, l-proline, and l-alanine, and the dipeptides glycine-glycine, glycine-alanine and glycine-proline and compare the performance to a traditional Raman spectroscopy probe via several multivariate analyses. We find that the DLIPS approach yields an ∼40% improvement in discrimination among these tissue building blocks. The effects of the 193-nm perturbation laser are further examined by assessing the photodestruction of targeted material molecular bonds. The DLIPS method with a Raman probe holds promise for future tissue diagnosis, either as a stand-alone technique or as part of an orthogonal biosensing scheme.</abstract><cop>United States</cop><pub>Society of Photo-Optical Instrumentation Engineers</pub><pmid>25905445</pmid><doi>10.1117/1.JBO.20.4.047006</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1083-3668
ispartof Journal of biomedical optics, 2015-04, Vol.20 (4), p.047006-047006
issn 1083-3668
1560-2281
language eng
recordid cdi_pubmed_primary_25905445
source SPIE Digital Library (Journals); PubMed Central
subjects Algorithms
Amino Acids - analysis
Amino Acids - chemistry
Amino Acids - radiation effects
Dipeptides - analysis
Dipeptides - chemistry
Dipeptides - radiation effects
Lasers
Peptide Mapping - methods
Reproducibility of Results
Sensitivity and Specificity
Spectrum Analysis, Raman - instrumentation
Spectrum Analysis, Raman - methods
title Differential laser-induced perturbation Raman spectroscopy: a comparison with Raman spectroscopy for analysis and classification of amino acids and dipeptides
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-07T11%3A19%3A07IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Differential%20laser-induced%20perturbation%20Raman%20spectroscopy:%20a%20comparison%20with%20Raman%20spectroscopy%20for%20analysis%20and%20classification%20of%20amino%20acids%20and%20dipeptides&rft.jtitle=Journal%20of%20biomedical%20optics&rft.au=Oztekin,%20Erman%20K&rft.date=2015-04-01&rft.volume=20&rft.issue=4&rft.spage=047006&rft.epage=047006&rft.pages=047006-047006&rft.issn=1083-3668&rft.eissn=1560-2281&rft_id=info:doi/10.1117/1.JBO.20.4.047006&rft_dat=%3Cproquest_pubme%3E1675878205%3C/proquest_pubme%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c460t-f9054f89e444a9bf95701930f2eb56d9fbe8948868f524ceb5694e7b30e69e163%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1675878205&rft_id=info:pmid/25905445&rfr_iscdi=true