The Dual Role of the 2'-OH Group of A76 tRNA Tyr in the Prevention of d-tyrosine Mistranslation

• Published in: Journal of molecular biology 2018-08, Vol.430 (17), p.2670
• Main Authors: Rybak, Mariia Yu, Kovalenko, Oksana P, Tukalo, Michael A
• Format: Article
• Language: English
• ISSN: 1089-8638
• DOI: 10.1016/j.jmb.2018.06.036

Aminoacyl-tRNA-synthetases are crucial enzymes for initiation step of translation. Possessing editing activity, they protect living cells from misincorporation of non-cognate and non-proteinogenic amino acids into proteins. Tyrosyl-tRNA synthetase (TyrRS) does not have such editing properties, but it shares weak stereospecificity in recognition of d-/l-tyrosine (Tyr). Nevertheless, an additional enzyme, d-aminoacyl-tRNA-deacylase (DTD), exists to overcome these deficiencies. The precise catalytic role of hydroxyl groups of the tRNA A76 in the catalysis by TyrRS and DTD remained unknown. To address this issue, [ P]-labeled tRNA substrates have been tested in aminoacylation and deacylation assays. TyrRS demonstrates similar activity in charging the 2' and 3'-OH groups of A76 with l-Tyr. This synthetase can effectively use both OH groups as primary sites for aminoacylation with l-Tyr, but demonstrates severe preference toward 2'-OH, in charging with d-Tyr. In both cases, the catalysis is not substrate-assisted: neither the 2'-OH nor the 3'-OH group assists catalysis. In contrast, DTD catalyzes deacylation of d-Tyr-tRNA specifically from the 3'-OH group, while the 2'-OH assists in this hydrolysis.