Loading…
A Medically Assisted Model for Precise Segmentation of Osteosarcoma Nuclei on Pathological Images
Osteosarcoma is the most common malignant bone tumor with a high degree of malignancy and misdiagnosis rates. Pathological images are crucial for its diagnosis. However, underdeveloped regions currently lack sufficient high-level pathologists, leading to uncertain diagnostic accuracy and efficiency....
Saved in:
Published in: | IEEE journal of biomedical and health informatics 2023-08, Vol.27 (8), p.1-12 |
---|---|
Main Authors: | , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c350t-7d9e49e30bcd19066cbb4a479383bc036b493e5d9aa0540092e5090dab22e8fa3 |
---|---|
cites | cdi_FETCH-LOGICAL-c350t-7d9e49e30bcd19066cbb4a479383bc036b493e5d9aa0540092e5090dab22e8fa3 |
container_end_page | 12 |
container_issue | 8 |
container_start_page | 1 |
container_title | IEEE journal of biomedical and health informatics |
container_volume | 27 |
creator | Wu, Jia Yuan, Tingyu Zeng, Jiachen Gou, Fangfang |
description | Osteosarcoma is the most common malignant bone tumor with a high degree of malignancy and misdiagnosis rates. Pathological images are crucial for its diagnosis. However, underdeveloped regions currently lack sufficient high-level pathologists, leading to uncertain diagnostic accuracy and efficiency. Existing research on pathological image segmentation often neglects the differences in staining styles and lack of data, without considering medical backgrounds. To alleviate the difficulty in diagnosing osteosarcoma in underdeveloped areas, an intelligent assisted diagnosis and treatment scheme for osteosarcoma pathological images, ENMViT, is proposed. ENMViT utilizes KIN to achieve normalization of mismatched images with limited GPU resources and uses traditional data enhancement methods, such as cleaning, cropping, mosaic, Laplacian sharpening, and other techniques to alleviate the issue of insufficient data. A multi-path semantic segmentation network combining Transformer and CNN is used to segment images, and the degree of edge offset in the spatial domain is introduced into the loss function. Finally, noise is filtered according to the size of the connecting domain. This paper experimented on more than 2000 osteosarcoma pathological images from Central South University. The experimental results demonstrate that this scheme performs well in each stage of the osteosarcoma pathological image processing, and the segmentation results' IoU index is 9.4% higher than the comparative models, demonstrating its significant value in the medical industry. |
doi_str_mv | 10.1109/JBHI.2023.3278303 |
format | article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmed_primary_37216252</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><ieee_id>10130168</ieee_id><sourcerecordid>2818054790</sourcerecordid><originalsourceid>FETCH-LOGICAL-c350t-7d9e49e30bcd19066cbb4a479383bc036b493e5d9aa0540092e5090dab22e8fa3</originalsourceid><addsrcrecordid>eNpdkc1OAjEURhujEYI8gIkxTdy4AW_b-esSiQoGhERdTzqdOzhkhmI7s-DtLQGMsZs2vef70vQQcs1gyBjIh9fHyXTIgYuh4HEiQJyRLmdRMuAckvPTmcmgQ_rOrcGvxF_J6JJ0ROynPORdokZ0jnmpVVXt6Mi50jWY07nJsaKFsXRpUZcO6Tuuatw0qinNhpqCLjxnnLLa1Iq-tbrCkvrJUjVfpjKrfSGd1mqF7opcFKpy2D_uPfL5_PQxngxmi5fpeDQbaBFCM4hziYFEAZnOmYQo0lkWqCCWIhGZBhFlgRQY5lIpCAMAyTEECbnKOMekUKJH7g-9W2u-W3RNWpdOY1WpDZrWpTxhiU_GEjx69w9dm9Zu_Os85YkoDmXoKXagtDXOWSzSrS1rZXcpg3SvIN0rSPcK0qMCn7k9NrdZjflv4vThHrg5ACUi_ilkArwc8QP0OYko</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2847967595</pqid></control><display><type>article</type><title>A Medically Assisted Model for Precise Segmentation of Osteosarcoma Nuclei on Pathological Images</title><source>IEEE Xplore (Online service)</source><creator>Wu, Jia ; Yuan, Tingyu ; Zeng, Jiachen ; Gou, Fangfang</creator><creatorcontrib>Wu, Jia ; Yuan, Tingyu ; Zeng, Jiachen ; Gou, Fangfang</creatorcontrib><description>Osteosarcoma is the most common malignant bone tumor with a high degree of malignancy and misdiagnosis rates. Pathological images are crucial for its diagnosis. However, underdeveloped regions currently lack sufficient high-level pathologists, leading to uncertain diagnostic accuracy and efficiency. Existing research on pathological image segmentation often neglects the differences in staining styles and lack of data, without considering medical backgrounds. To alleviate the difficulty in diagnosing osteosarcoma in underdeveloped areas, an intelligent assisted diagnosis and treatment scheme for osteosarcoma pathological images, ENMViT, is proposed. ENMViT utilizes KIN to achieve normalization of mismatched images with limited GPU resources and uses traditional data enhancement methods, such as cleaning, cropping, mosaic, Laplacian sharpening, and other techniques to alleviate the issue of insufficient data. A multi-path semantic segmentation network combining Transformer and CNN is used to segment images, and the degree of edge offset in the spatial domain is introduced into the loss function. Finally, noise is filtered according to the size of the connecting domain. This paper experimented on more than 2000 osteosarcoma pathological images from Central South University. The experimental results demonstrate that this scheme performs well in each stage of the osteosarcoma pathological image processing, and the segmentation results' IoU index is 9.4% higher than the comparative models, demonstrating its significant value in the medical industry.</description><identifier>ISSN: 2168-2194</identifier><identifier>EISSN: 2168-2208</identifier><identifier>DOI: 10.1109/JBHI.2023.3278303</identifier><identifier>PMID: 37216252</identifier><identifier>CODEN: IJBHA9</identifier><language>eng</language><publisher>United States: IEEE</publisher><subject>Bone cancer ; Bone Neoplasms - diagnostic imaging ; Bone tumors ; Cancer ; Cell Nucleus ; Data enhancement ; Diagnosis ; edge enhancement ; Hardware ; Humans ; Image edge detection ; Image enhancement ; Image processing ; Image Processing, Computer-Assisted - methods ; Image segmentation ; Malignancy ; Medical diagnosis ; Medical diagnostic imaging ; Medical imaging ; Medical services ; Osteosarcoma ; Osteosarcoma - diagnostic imaging ; pathological image ; Pathology ; Sarcoma ; Semantic segmentation ; Software ; stain normalization</subject><ispartof>IEEE journal of biomedical and health informatics, 2023-08, Vol.27 (8), p.1-12</ispartof><rights>Copyright The Institute of Electrical and Electronics Engineers, Inc. (IEEE) 2023</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c350t-7d9e49e30bcd19066cbb4a479383bc036b493e5d9aa0540092e5090dab22e8fa3</citedby><cites>FETCH-LOGICAL-c350t-7d9e49e30bcd19066cbb4a479383bc036b493e5d9aa0540092e5090dab22e8fa3</cites><orcidid>0000-0001-9013-0818 ; 0000-0003-0453-8222 ; 0000-0003-2619-7908 ; 0000-0003-0895-8726</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://ieeexplore.ieee.org/document/10130168$$EHTML$$P50$$Gieee$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,54796</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37216252$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wu, Jia</creatorcontrib><creatorcontrib>Yuan, Tingyu</creatorcontrib><creatorcontrib>Zeng, Jiachen</creatorcontrib><creatorcontrib>Gou, Fangfang</creatorcontrib><title>A Medically Assisted Model for Precise Segmentation of Osteosarcoma Nuclei on Pathological Images</title><title>IEEE journal of biomedical and health informatics</title><addtitle>JBHI</addtitle><addtitle>IEEE J Biomed Health Inform</addtitle><description>Osteosarcoma is the most common malignant bone tumor with a high degree of malignancy and misdiagnosis rates. Pathological images are crucial for its diagnosis. However, underdeveloped regions currently lack sufficient high-level pathologists, leading to uncertain diagnostic accuracy and efficiency. Existing research on pathological image segmentation often neglects the differences in staining styles and lack of data, without considering medical backgrounds. To alleviate the difficulty in diagnosing osteosarcoma in underdeveloped areas, an intelligent assisted diagnosis and treatment scheme for osteosarcoma pathological images, ENMViT, is proposed. ENMViT utilizes KIN to achieve normalization of mismatched images with limited GPU resources and uses traditional data enhancement methods, such as cleaning, cropping, mosaic, Laplacian sharpening, and other techniques to alleviate the issue of insufficient data. A multi-path semantic segmentation network combining Transformer and CNN is used to segment images, and the degree of edge offset in the spatial domain is introduced into the loss function. Finally, noise is filtered according to the size of the connecting domain. This paper experimented on more than 2000 osteosarcoma pathological images from Central South University. The experimental results demonstrate that this scheme performs well in each stage of the osteosarcoma pathological image processing, and the segmentation results' IoU index is 9.4% higher than the comparative models, demonstrating its significant value in the medical industry.</description><subject>Bone cancer</subject><subject>Bone Neoplasms - diagnostic imaging</subject><subject>Bone tumors</subject><subject>Cancer</subject><subject>Cell Nucleus</subject><subject>Data enhancement</subject><subject>Diagnosis</subject><subject>edge enhancement</subject><subject>Hardware</subject><subject>Humans</subject><subject>Image edge detection</subject><subject>Image enhancement</subject><subject>Image processing</subject><subject>Image Processing, Computer-Assisted - methods</subject><subject>Image segmentation</subject><subject>Malignancy</subject><subject>Medical diagnosis</subject><subject>Medical diagnostic imaging</subject><subject>Medical imaging</subject><subject>Medical services</subject><subject>Osteosarcoma</subject><subject>Osteosarcoma - diagnostic imaging</subject><subject>pathological image</subject><subject>Pathology</subject><subject>Sarcoma</subject><subject>Semantic segmentation</subject><subject>Software</subject><subject>stain normalization</subject><issn>2168-2194</issn><issn>2168-2208</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNpdkc1OAjEURhujEYI8gIkxTdy4AW_b-esSiQoGhERdTzqdOzhkhmI7s-DtLQGMsZs2vef70vQQcs1gyBjIh9fHyXTIgYuh4HEiQJyRLmdRMuAckvPTmcmgQ_rOrcGvxF_J6JJ0ROynPORdokZ0jnmpVVXt6Mi50jWY07nJsaKFsXRpUZcO6Tuuatw0qinNhpqCLjxnnLLa1Iq-tbrCkvrJUjVfpjKrfSGd1mqF7opcFKpy2D_uPfL5_PQxngxmi5fpeDQbaBFCM4hziYFEAZnOmYQo0lkWqCCWIhGZBhFlgRQY5lIpCAMAyTEECbnKOMekUKJH7g-9W2u-W3RNWpdOY1WpDZrWpTxhiU_GEjx69w9dm9Zu_Os85YkoDmXoKXagtDXOWSzSrS1rZXcpg3SvIN0rSPcK0qMCn7k9NrdZjflv4vThHrg5ACUi_ilkArwc8QP0OYko</recordid><startdate>20230801</startdate><enddate>20230801</enddate><creator>Wu, Jia</creator><creator>Yuan, Tingyu</creator><creator>Zeng, Jiachen</creator><creator>Gou, Fangfang</creator><general>IEEE</general><general>The Institute of Electrical and Electronics Engineers, Inc. (IEEE)</general><scope>97E</scope><scope>RIA</scope><scope>RIE</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QF</scope><scope>7QO</scope><scope>7QQ</scope><scope>7SC</scope><scope>7SE</scope><scope>7SP</scope><scope>7SR</scope><scope>7TA</scope><scope>7TB</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>F28</scope><scope>FR3</scope><scope>H8D</scope><scope>JG9</scope><scope>JQ2</scope><scope>K9.</scope><scope>KR7</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>NAPCQ</scope><scope>P64</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-9013-0818</orcidid><orcidid>https://orcid.org/0000-0003-0453-8222</orcidid><orcidid>https://orcid.org/0000-0003-2619-7908</orcidid><orcidid>https://orcid.org/0000-0003-0895-8726</orcidid></search><sort><creationdate>20230801</creationdate><title>A Medically Assisted Model for Precise Segmentation of Osteosarcoma Nuclei on Pathological Images</title><author>Wu, Jia ; Yuan, Tingyu ; Zeng, Jiachen ; Gou, Fangfang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c350t-7d9e49e30bcd19066cbb4a479383bc036b493e5d9aa0540092e5090dab22e8fa3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Bone cancer</topic><topic>Bone Neoplasms - diagnostic imaging</topic><topic>Bone tumors</topic><topic>Cancer</topic><topic>Cell Nucleus</topic><topic>Data enhancement</topic><topic>Diagnosis</topic><topic>edge enhancement</topic><topic>Hardware</topic><topic>Humans</topic><topic>Image edge detection</topic><topic>Image enhancement</topic><topic>Image processing</topic><topic>Image Processing, Computer-Assisted - methods</topic><topic>Image segmentation</topic><topic>Malignancy</topic><topic>Medical diagnosis</topic><topic>Medical diagnostic imaging</topic><topic>Medical imaging</topic><topic>Medical services</topic><topic>Osteosarcoma</topic><topic>Osteosarcoma - diagnostic imaging</topic><topic>pathological image</topic><topic>Pathology</topic><topic>Sarcoma</topic><topic>Semantic segmentation</topic><topic>Software</topic><topic>stain normalization</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wu, Jia</creatorcontrib><creatorcontrib>Yuan, Tingyu</creatorcontrib><creatorcontrib>Zeng, Jiachen</creatorcontrib><creatorcontrib>Gou, Fangfang</creatorcontrib><collection>IEEE All-Society Periodicals Package (ASPP) 2005-present</collection><collection>IEEE All-Society Periodicals Package (ASPP) 1998-Present</collection><collection>IEEE Xplore (Online service)</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Aluminium Industry Abstracts</collection><collection>Biotechnology Research Abstracts</collection><collection>Ceramic Abstracts</collection><collection>Computer and Information Systems Abstracts</collection><collection>Corrosion Abstracts</collection><collection>Electronics & Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Materials Business File</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>ANTE: Abstracts in New Technology & Engineering</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts – Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Nursing & Allied Health Premium</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>IEEE journal of biomedical and health informatics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wu, Jia</au><au>Yuan, Tingyu</au><au>Zeng, Jiachen</au><au>Gou, Fangfang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Medically Assisted Model for Precise Segmentation of Osteosarcoma Nuclei on Pathological Images</atitle><jtitle>IEEE journal of biomedical and health informatics</jtitle><stitle>JBHI</stitle><addtitle>IEEE J Biomed Health Inform</addtitle><date>2023-08-01</date><risdate>2023</risdate><volume>27</volume><issue>8</issue><spage>1</spage><epage>12</epage><pages>1-12</pages><issn>2168-2194</issn><eissn>2168-2208</eissn><coden>IJBHA9</coden><abstract>Osteosarcoma is the most common malignant bone tumor with a high degree of malignancy and misdiagnosis rates. Pathological images are crucial for its diagnosis. However, underdeveloped regions currently lack sufficient high-level pathologists, leading to uncertain diagnostic accuracy and efficiency. Existing research on pathological image segmentation often neglects the differences in staining styles and lack of data, without considering medical backgrounds. To alleviate the difficulty in diagnosing osteosarcoma in underdeveloped areas, an intelligent assisted diagnosis and treatment scheme for osteosarcoma pathological images, ENMViT, is proposed. ENMViT utilizes KIN to achieve normalization of mismatched images with limited GPU resources and uses traditional data enhancement methods, such as cleaning, cropping, mosaic, Laplacian sharpening, and other techniques to alleviate the issue of insufficient data. A multi-path semantic segmentation network combining Transformer and CNN is used to segment images, and the degree of edge offset in the spatial domain is introduced into the loss function. Finally, noise is filtered according to the size of the connecting domain. This paper experimented on more than 2000 osteosarcoma pathological images from Central South University. The experimental results demonstrate that this scheme performs well in each stage of the osteosarcoma pathological image processing, and the segmentation results' IoU index is 9.4% higher than the comparative models, demonstrating its significant value in the medical industry.</abstract><cop>United States</cop><pub>IEEE</pub><pmid>37216252</pmid><doi>10.1109/JBHI.2023.3278303</doi><tpages>12</tpages><orcidid>https://orcid.org/0000-0001-9013-0818</orcidid><orcidid>https://orcid.org/0000-0003-0453-8222</orcidid><orcidid>https://orcid.org/0000-0003-2619-7908</orcidid><orcidid>https://orcid.org/0000-0003-0895-8726</orcidid></addata></record> |
fulltext | fulltext |
identifier | ISSN: 2168-2194 |
ispartof | IEEE journal of biomedical and health informatics, 2023-08, Vol.27 (8), p.1-12 |
issn | 2168-2194 2168-2208 |
language | eng |
recordid | cdi_pubmed_primary_37216252 |
source | IEEE Xplore (Online service) |
subjects | Bone cancer Bone Neoplasms - diagnostic imaging Bone tumors Cancer Cell Nucleus Data enhancement Diagnosis edge enhancement Hardware Humans Image edge detection Image enhancement Image processing Image Processing, Computer-Assisted - methods Image segmentation Malignancy Medical diagnosis Medical diagnostic imaging Medical imaging Medical services Osteosarcoma Osteosarcoma - diagnostic imaging pathological image Pathology Sarcoma Semantic segmentation Software stain normalization |
title | A Medically Assisted Model for Precise Segmentation of Osteosarcoma Nuclei on Pathological Images |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-27T11%3A43%3A33IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=A%20Medically%20Assisted%20Model%20for%20Precise%20Segmentation%20of%20Osteosarcoma%20Nuclei%20on%20Pathological%20Images&rft.jtitle=IEEE%20journal%20of%20biomedical%20and%20health%20informatics&rft.au=Wu,%20Jia&rft.date=2023-08-01&rft.volume=27&rft.issue=8&rft.spage=1&rft.epage=12&rft.pages=1-12&rft.issn=2168-2194&rft.eissn=2168-2208&rft.coden=IJBHA9&rft_id=info:doi/10.1109/JBHI.2023.3278303&rft_dat=%3Cproquest_pubme%3E2818054790%3C/proquest_pubme%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c350t-7d9e49e30bcd19066cbb4a479383bc036b493e5d9aa0540092e5090dab22e8fa3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2847967595&rft_id=info:pmid/37216252&rft_ieee_id=10130168&rfr_iscdi=true |