The nuclear effector ArPEC25 from the necrotrophic fungus Ascochyta rabiei targets the chickpea transcription factor CaβLIM1a and negatively modulates lignin biosynthesis, increasing host susceptibility

• Published in: The Plant cell 2023-03, Vol.35 (3), p.1134-1159
• Main Authors: Singh, Shreenivas Kumar, Shree, Ankita, Verma, Sandhya, Singh, Kunal, Kumar, Kamal, Srivastava, Vikas, Singh, Ritu, Saxena, Samiksha, Singh, Agam Prasad, Pandey, Ashutosh, Verma, Praveen Kumar
• Format: Article
• Language: English
• Subjects: Ascomycota - genetics; Ascomycota - metabolism; Cicer - genetics; Cicer - metabolism; Cicer - microbiology; Lignin - metabolism; Plant Diseases - genetics; Plant Diseases - microbiology; Transcription Factors - genetics; Transcription Factors - metabolism
• ISSN: 1040-4651; 1532-298X
• DOI: 10.1093/plcell/koac372

Abstract Fungal pathogens deploy a barrage of secreted effectors to subvert host immunity, often by evading, disrupting, or altering key components of transcription, defense signaling, and metabolic pathways. However, the underlying mechanisms of effectors and their host targets are largely unexplored in necrotrophic fungal pathogens. Here, we describe the effector protein Ascochyta rabiei PEXEL-like Effector Candidate 25 (ArPEC25), which is secreted by the necrotroph A. rabiei, the causal agent of Ascochyta blight disease in chickpea (Cicer arietinum), and is indispensable for virulence. After entering host cells, ArPEC25 localizes to the nucleus and targets the host LIM transcription factor CaβLIM1a. CaβLIM1a is a transcriptional regulator of CaPAL1, which encodes phenylalanine ammonia lyase (PAL), the regulatory, gatekeeping enzyme of the phenylpropanoid pathway. ArPEC25 inhibits the transactivation of CaβLIM1a by interfering with its DNA-binding ability, resulting in negative regulation of the phenylpropanoid pathway and decreased levels of intermediates of lignin biosynthesis, thereby suppressing lignin production. Our findings illustrate the role of fungal effectors in enhancing virulence by targeting a key defense pathway that leads to the biosynthesis of various secondary metabolites and antifungal compounds. This study provides a template for the study of less explored necrotrophic effectors and their host target functions. The Ascochyta rabiei effector ArPEC25 enters the host nucleus and targets the transcription factor CaβLIM1a to suppress the expression of CaPAL1, resulting in modulation of lignin biosynthesis.