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Tuberculosis is associated with sputum metabolome variations, irrespective of patient sex or HIV status: an untargeted GCxGC-TOFMS study

Introduction Various studies have identified TB-induced metabolome variations. However, in most of these studies, a large degree of variation exists between individual patients. Objectives To identify differential metabolites for TB, independent of patients’ sex or HIV status. Methods Untargeted GCx...

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Published in:Metabolomics 2023-06, Vol.19 (6), p.55-55, Article 55
Main Authors: Beukes, Derylize, van Reenen, Mari, Loots, Du Toit, du Preez, Ilse
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description Introduction Various studies have identified TB-induced metabolome variations. However, in most of these studies, a large degree of variation exists between individual patients. Objectives To identify differential metabolites for TB, independent of patients’ sex or HIV status. Methods Untargeted GCxGC/TOF-MS analyses were applied to the sputum of 31 TB + and 197 TB- individuals. Univariate statistics were used to identify metabolites which are significantly different between TB + and TB- individuals (a) irrespective of HIV status, and (b) with a HIV + status. Comparisons a and b were repeated for (i) all participants, (ii) males only and (iii) females only. Results Twenty-one compounds were significantly different between the TB + and TB- individuals within the female subgroup (11% lipids; 10% carbohydrates; 1% amino acids, 5% other and 73% unannotated), and 6 within the male subgroup (20% lipids; 40% carbohydrates; 6% amino acids, 7% other and 27% unannotated). For the HIV + patients (TB + vs. TB-), a total of 125 compounds were significant within the female subgroup (16% lipids; 8% carbohydrates; 12% amino acids, 6% organic acids, 8% other and 50% unannotated), and 44 within the male subgroup (17% lipids; 2% carbohydrates; 14% amino acids related, 8% organic acids, 9% other and 50% unannotated). Only one annotated compound, 1-oleoyl lysophosphaditic acid, was consistently identified as a differential metabolite for TB, irrespective of sex or HIV status. The potential clinical application of this compound should be evaluated further. Conclusions Our findings highlight the importance of considering confounders in metabolomics studies in order to identify unambiguous disease biomarkers.
doi_str_mv 10.1007/s11306-023-02017-7
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However, in most of these studies, a large degree of variation exists between individual patients. Objectives To identify differential metabolites for TB, independent of patients’ sex or HIV status. Methods Untargeted GCxGC/TOF-MS analyses were applied to the sputum of 31 TB + and 197 TB- individuals. Univariate statistics were used to identify metabolites which are significantly different between TB + and TB- individuals (a) irrespective of HIV status, and (b) with a HIV + status. Comparisons a and b were repeated for (i) all participants, (ii) males only and (iii) females only. Results Twenty-one compounds were significantly different between the TB + and TB- individuals within the female subgroup (11% lipids; 10% carbohydrates; 1% amino acids, 5% other and 73% unannotated), and 6 within the male subgroup (20% lipids; 40% carbohydrates; 6% amino acids, 7% other and 27% unannotated). For the HIV + patients (TB + vs. TB-), a total of 125 compounds were significant within the female subgroup (16% lipids; 8% carbohydrates; 12% amino acids, 6% organic acids, 8% other and 50% unannotated), and 44 within the male subgroup (17% lipids; 2% carbohydrates; 14% amino acids related, 8% organic acids, 9% other and 50% unannotated). Only one annotated compound, 1-oleoyl lysophosphaditic acid, was consistently identified as a differential metabolite for TB, irrespective of sex or HIV status. The potential clinical application of this compound should be evaluated further. Conclusions Our findings highlight the importance of considering confounders in metabolomics studies in order to identify unambiguous disease biomarkers.</description><identifier>ISSN: 1573-3890</identifier><identifier>ISSN: 1573-3882</identifier><identifier>EISSN: 1573-3890</identifier><identifier>DOI: 10.1007/s11306-023-02017-7</identifier><identifier>PMID: 37284915</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Amines - metabolism ; Amino acids ; Amino Acids - metabolism ; Biochemistry ; Biomedical and Life Sciences ; Biomedicine ; Carbohydrates ; Cell Biology ; Confounding (Statistics) ; Developmental Biology ; Female ; Females ; HIV ; HIV Infections - complications ; Human immunodeficiency virus ; Humans ; Life Sciences ; Lipids ; Male ; Metabolites ; Metabolome ; Metabolomics ; Molecular Medicine ; Organic acids ; Original ; Original Article ; Sex ; Sputum ; Sputum - metabolism ; Tuberculosis ; Tuberculosis - metabolism ; Tuberculosis, Pulmonary - complications ; Tuberculosis, Pulmonary - diagnosis ; Tuberculosis, Pulmonary - metabolism ; Variation</subject><ispartof>Metabolomics, 2023-06, Vol.19 (6), p.55-55, Article 55</ispartof><rights>The Author(s) 2023. 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However, in most of these studies, a large degree of variation exists between individual patients. Objectives To identify differential metabolites for TB, independent of patients’ sex or HIV status. Methods Untargeted GCxGC/TOF-MS analyses were applied to the sputum of 31 TB + and 197 TB- individuals. Univariate statistics were used to identify metabolites which are significantly different between TB + and TB- individuals (a) irrespective of HIV status, and (b) with a HIV + status. Comparisons a and b were repeated for (i) all participants, (ii) males only and (iii) females only. Results Twenty-one compounds were significantly different between the TB + and TB- individuals within the female subgroup (11% lipids; 10% carbohydrates; 1% amino acids, 5% other and 73% unannotated), and 6 within the male subgroup (20% lipids; 40% carbohydrates; 6% amino acids, 7% other and 27% unannotated). For the HIV + patients (TB + vs. TB-), a total of 125 compounds were significant within the female subgroup (16% lipids; 8% carbohydrates; 12% amino acids, 6% organic acids, 8% other and 50% unannotated), and 44 within the male subgroup (17% lipids; 2% carbohydrates; 14% amino acids related, 8% organic acids, 9% other and 50% unannotated). Only one annotated compound, 1-oleoyl lysophosphaditic acid, was consistently identified as a differential metabolite for TB, irrespective of sex or HIV status. The potential clinical application of this compound should be evaluated further. 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However, in most of these studies, a large degree of variation exists between individual patients. Objectives To identify differential metabolites for TB, independent of patients’ sex or HIV status. Methods Untargeted GCxGC/TOF-MS analyses were applied to the sputum of 31 TB + and 197 TB- individuals. Univariate statistics were used to identify metabolites which are significantly different between TB + and TB- individuals (a) irrespective of HIV status, and (b) with a HIV + status. Comparisons a and b were repeated for (i) all participants, (ii) males only and (iii) females only. Results Twenty-one compounds were significantly different between the TB + and TB- individuals within the female subgroup (11% lipids; 10% carbohydrates; 1% amino acids, 5% other and 73% unannotated), and 6 within the male subgroup (20% lipids; 40% carbohydrates; 6% amino acids, 7% other and 27% unannotated). For the HIV + patients (TB + vs. TB-), a total of 125 compounds were significant within the female subgroup (16% lipids; 8% carbohydrates; 12% amino acids, 6% organic acids, 8% other and 50% unannotated), and 44 within the male subgroup (17% lipids; 2% carbohydrates; 14% amino acids related, 8% organic acids, 9% other and 50% unannotated). Only one annotated compound, 1-oleoyl lysophosphaditic acid, was consistently identified as a differential metabolite for TB, irrespective of sex or HIV status. The potential clinical application of this compound should be evaluated further. 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subjects Amines - metabolism
Amino acids
Amino Acids - metabolism
Biochemistry
Biomedical and Life Sciences
Biomedicine
Carbohydrates
Cell Biology
Confounding (Statistics)
Developmental Biology
Female
Females
HIV
HIV Infections - complications
Human immunodeficiency virus
Humans
Life Sciences
Lipids
Male
Metabolites
Metabolome
Metabolomics
Molecular Medicine
Organic acids
Original
Original Article
Sex
Sputum
Sputum - metabolism
Tuberculosis
Tuberculosis - metabolism
Tuberculosis, Pulmonary - complications
Tuberculosis, Pulmonary - diagnosis
Tuberculosis, Pulmonary - metabolism
Variation
title Tuberculosis is associated with sputum metabolome variations, irrespective of patient sex or HIV status: an untargeted GCxGC-TOFMS study
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