Loading…

Multispectral Imaging Method for Rapid Identification and Analysis of Paraffin-Embedded Pathological Tissues

The study of the interaction between light and biological tissue is of great help in the identification of diseases as well as structural alterations in tissues. In the present study, we have developed a tissue diagnostic technique by using multispectral imaging in the visible spectrum combined with...

Full description

Saved in:
Bibliographic Details
Published in:Journal of digital imaging 2023-08, Vol.36 (4), p.1663-1674
Main Authors: Sijilmassi, Ouafa, López Alonso, José-Manuel, Del Río Sevilla, Aurora, Barrio Asensio, María del Carmen
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c475t-1df9a66f53e728d8680f186167aa07d77e2ecf3ca3e61bb4aa9a17e6025f51db3
cites cdi_FETCH-LOGICAL-c475t-1df9a66f53e728d8680f186167aa07d77e2ecf3ca3e61bb4aa9a17e6025f51db3
container_end_page 1674
container_issue 4
container_start_page 1663
container_title Journal of digital imaging
container_volume 36
creator Sijilmassi, Ouafa
López Alonso, José-Manuel
Del Río Sevilla, Aurora
Barrio Asensio, María del Carmen
description The study of the interaction between light and biological tissue is of great help in the identification of diseases as well as structural alterations in tissues. In the present study, we have developed a tissue diagnostic technique by using multispectral imaging in the visible spectrum combined with principal component analysis (PCA). We used information from the propagation of light through paraffin-embedded tissues to assess differences in the eye tissues of control mouse embryos compared to mouse embryos whose mothers were deprived of folic acid (FA), a crucial vitamin necessary for the growth and development of the fetus. After acquiring the endmembers from the multispectral images, spectral unmixing was used to identify the abundances of those endmembers in each pixel. For each acquired image, the final analysis was performed by performing a pixel-by-pixel and wavelength-by-wavelength absorbance calculation. Non-negative least squares (NNLS) were used in this research. The abundance maps obtained for the first endmember revealed vascular alterations (vitreous and choroid) in the embryos with maternal FA deficiency. However, the abundance maps obtained for the third endmember showed alterations in the texture of some tissues such as the lens and retina. Results indicated that multispectral imaging applied to paraffin-embedded tissues enhanced tissue visualization. Using this method, first, it can be seen tissue damage location and then decide what kind of biological techniques to apply.
doi_str_mv 10.1007/s10278-023-00826-9
format article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10406798</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2847144813</sourcerecordid><originalsourceid>FETCH-LOGICAL-c475t-1df9a66f53e728d8680f186167aa07d77e2ecf3ca3e61bb4aa9a17e6025f51db3</originalsourceid><addsrcrecordid>eNp9kUtv1TAQhSMEog_4AyyQJTZsAn4kHmeFqqrQK7UCoSKxsyaxnbpK7IudVOq_x5dbSmHBypbnmzNnfKrqFaPvGKXwPjPKQdWUi5pSxWXdPakOmWSqBg7fnz66H1RHOd9QyqCF5nl1IIACb6E7rKbLdVp83tphSTiRzYyjDyO5tMt1NMTFRL7i1huyMTYs3vkBFx8DwWDIScDpLvtMoiNfMKFzPtRnc2-Nsaa8FIUpjqVjIlc-59XmF9Uzh1O2L-_P4-rbx7Or0_P64vOnzenJRT000C41M65DKV0rLHBllFTUMSWZBEQKBsByOzgxoLCS9X2D2CEDKylvXctML46rD3vd7drP1gzFellOb5OfMd3piF7_XQn-Wo_xVjPaUAmdKgpv7xVS_FGcL3r2ebDThMHGNWuuqBC866Ar6Jt_0Ju4pvI3O6oB1jSKiULxPTWkmHOy7sENo3qXpt6nqUua-leaeif9-vEeDy2_4yuA2AO5lMJo05_Z_5H9CVP-rOQ</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2847144813</pqid></control><display><type>article</type><title>Multispectral Imaging Method for Rapid Identification and Analysis of Paraffin-Embedded Pathological Tissues</title><source>NCBI_PubMed Central(免费)</source><source>Springer Nature</source><creator>Sijilmassi, Ouafa ; López Alonso, José-Manuel ; Del Río Sevilla, Aurora ; Barrio Asensio, María del Carmen</creator><creatorcontrib>Sijilmassi, Ouafa ; López Alonso, José-Manuel ; Del Río Sevilla, Aurora ; Barrio Asensio, María del Carmen</creatorcontrib><description>The study of the interaction between light and biological tissue is of great help in the identification of diseases as well as structural alterations in tissues. In the present study, we have developed a tissue diagnostic technique by using multispectral imaging in the visible spectrum combined with principal component analysis (PCA). We used information from the propagation of light through paraffin-embedded tissues to assess differences in the eye tissues of control mouse embryos compared to mouse embryos whose mothers were deprived of folic acid (FA), a crucial vitamin necessary for the growth and development of the fetus. After acquiring the endmembers from the multispectral images, spectral unmixing was used to identify the abundances of those endmembers in each pixel. For each acquired image, the final analysis was performed by performing a pixel-by-pixel and wavelength-by-wavelength absorbance calculation. Non-negative least squares (NNLS) were used in this research. The abundance maps obtained for the first endmember revealed vascular alterations (vitreous and choroid) in the embryos with maternal FA deficiency. However, the abundance maps obtained for the third endmember showed alterations in the texture of some tissues such as the lens and retina. Results indicated that multispectral imaging applied to paraffin-embedded tissues enhanced tissue visualization. Using this method, first, it can be seen tissue damage location and then decide what kind of biological techniques to apply.</description><identifier>ISSN: 1618-727X</identifier><identifier>ISSN: 0897-1889</identifier><identifier>EISSN: 1618-727X</identifier><identifier>DOI: 10.1007/s10278-023-00826-9</identifier><identifier>PMID: 37072579</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Animal tissues ; Cameras ; Damage detection ; Digital imaging ; Embryos ; Eye lens ; Fetuses ; Folic acid ; Image acquisition ; Image processing ; Imaging ; Light ; Medical imaging ; Medicine ; Medicine &amp; Public Health ; Optometry ; Paraffin ; Paraffins ; Pixels ; Principal components analysis ; Radiology ; Tissues ; Visible spectrum ; Vitamin B ; Wavelength</subject><ispartof>Journal of digital imaging, 2023-08, Vol.36 (4), p.1663-1674</ispartof><rights>The Author(s) 2023</rights><rights>2023. The Author(s).</rights><rights>The Author(s) 2023. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c475t-1df9a66f53e728d8680f186167aa07d77e2ecf3ca3e61bb4aa9a17e6025f51db3</citedby><cites>FETCH-LOGICAL-c475t-1df9a66f53e728d8680f186167aa07d77e2ecf3ca3e61bb4aa9a17e6025f51db3</cites><orcidid>0000-0002-8475-2642 ; 0000-0001-6349-1845 ; 0000-0003-0513-0229 ; 0000-0001-7619-8656</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10406798/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10406798/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27900,27901,53765,53767</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37072579$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sijilmassi, Ouafa</creatorcontrib><creatorcontrib>López Alonso, José-Manuel</creatorcontrib><creatorcontrib>Del Río Sevilla, Aurora</creatorcontrib><creatorcontrib>Barrio Asensio, María del Carmen</creatorcontrib><title>Multispectral Imaging Method for Rapid Identification and Analysis of Paraffin-Embedded Pathological Tissues</title><title>Journal of digital imaging</title><addtitle>J Digit Imaging</addtitle><addtitle>J Digit Imaging</addtitle><description>The study of the interaction between light and biological tissue is of great help in the identification of diseases as well as structural alterations in tissues. In the present study, we have developed a tissue diagnostic technique by using multispectral imaging in the visible spectrum combined with principal component analysis (PCA). We used information from the propagation of light through paraffin-embedded tissues to assess differences in the eye tissues of control mouse embryos compared to mouse embryos whose mothers were deprived of folic acid (FA), a crucial vitamin necessary for the growth and development of the fetus. After acquiring the endmembers from the multispectral images, spectral unmixing was used to identify the abundances of those endmembers in each pixel. For each acquired image, the final analysis was performed by performing a pixel-by-pixel and wavelength-by-wavelength absorbance calculation. Non-negative least squares (NNLS) were used in this research. The abundance maps obtained for the first endmember revealed vascular alterations (vitreous and choroid) in the embryos with maternal FA deficiency. However, the abundance maps obtained for the third endmember showed alterations in the texture of some tissues such as the lens and retina. Results indicated that multispectral imaging applied to paraffin-embedded tissues enhanced tissue visualization. Using this method, first, it can be seen tissue damage location and then decide what kind of biological techniques to apply.</description><subject>Animal tissues</subject><subject>Cameras</subject><subject>Damage detection</subject><subject>Digital imaging</subject><subject>Embryos</subject><subject>Eye lens</subject><subject>Fetuses</subject><subject>Folic acid</subject><subject>Image acquisition</subject><subject>Image processing</subject><subject>Imaging</subject><subject>Light</subject><subject>Medical imaging</subject><subject>Medicine</subject><subject>Medicine &amp; Public Health</subject><subject>Optometry</subject><subject>Paraffin</subject><subject>Paraffins</subject><subject>Pixels</subject><subject>Principal components analysis</subject><subject>Radiology</subject><subject>Tissues</subject><subject>Visible spectrum</subject><subject>Vitamin B</subject><subject>Wavelength</subject><issn>1618-727X</issn><issn>0897-1889</issn><issn>1618-727X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNp9kUtv1TAQhSMEog_4AyyQJTZsAn4kHmeFqqrQK7UCoSKxsyaxnbpK7IudVOq_x5dbSmHBypbnmzNnfKrqFaPvGKXwPjPKQdWUi5pSxWXdPakOmWSqBg7fnz66H1RHOd9QyqCF5nl1IIACb6E7rKbLdVp83tphSTiRzYyjDyO5tMt1NMTFRL7i1huyMTYs3vkBFx8DwWDIScDpLvtMoiNfMKFzPtRnc2-Nsaa8FIUpjqVjIlc-59XmF9Uzh1O2L-_P4-rbx7Or0_P64vOnzenJRT000C41M65DKV0rLHBllFTUMSWZBEQKBsByOzgxoLCS9X2D2CEDKylvXctML46rD3vd7drP1gzFellOb5OfMd3piF7_XQn-Wo_xVjPaUAmdKgpv7xVS_FGcL3r2ebDThMHGNWuuqBC866Ar6Jt_0Ju4pvI3O6oB1jSKiULxPTWkmHOy7sENo3qXpt6nqUua-leaeif9-vEeDy2_4yuA2AO5lMJo05_Z_5H9CVP-rOQ</recordid><startdate>20230801</startdate><enddate>20230801</enddate><creator>Sijilmassi, Ouafa</creator><creator>López Alonso, José-Manuel</creator><creator>Del Río Sevilla, Aurora</creator><creator>Barrio Asensio, María del Carmen</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QO</scope><scope>7RV</scope><scope>7SC</scope><scope>7TK</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>JQ2</scope><scope>K9.</scope><scope>KB0</scope><scope>L7M</scope><scope>LK8</scope><scope>L~C</scope><scope>L~D</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PHGZM</scope><scope>PHGZT</scope><scope>PJZUB</scope><scope>PKEHL</scope><scope>PPXIY</scope><scope>PQEST</scope><scope>PQGLB</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-8475-2642</orcidid><orcidid>https://orcid.org/0000-0001-6349-1845</orcidid><orcidid>https://orcid.org/0000-0003-0513-0229</orcidid><orcidid>https://orcid.org/0000-0001-7619-8656</orcidid></search><sort><creationdate>20230801</creationdate><title>Multispectral Imaging Method for Rapid Identification and Analysis of Paraffin-Embedded Pathological Tissues</title><author>Sijilmassi, Ouafa ; López Alonso, José-Manuel ; Del Río Sevilla, Aurora ; Barrio Asensio, María del Carmen</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c475t-1df9a66f53e728d8680f186167aa07d77e2ecf3ca3e61bb4aa9a17e6025f51db3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Animal tissues</topic><topic>Cameras</topic><topic>Damage detection</topic><topic>Digital imaging</topic><topic>Embryos</topic><topic>Eye lens</topic><topic>Fetuses</topic><topic>Folic acid</topic><topic>Image acquisition</topic><topic>Image processing</topic><topic>Imaging</topic><topic>Light</topic><topic>Medical imaging</topic><topic>Medicine</topic><topic>Medicine &amp; Public Health</topic><topic>Optometry</topic><topic>Paraffin</topic><topic>Paraffins</topic><topic>Pixels</topic><topic>Principal components analysis</topic><topic>Radiology</topic><topic>Tissues</topic><topic>Visible spectrum</topic><topic>Vitamin B</topic><topic>Wavelength</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sijilmassi, Ouafa</creatorcontrib><creatorcontrib>López Alonso, José-Manuel</creatorcontrib><creatorcontrib>Del Río Sevilla, Aurora</creatorcontrib><creatorcontrib>Barrio Asensio, María del Carmen</creatorcontrib><collection>Springer_OA刊</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Biotechnology Research Abstracts</collection><collection>Nursing &amp; Allied Health Database</collection><collection>Computer and Information Systems Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>ProQuest_Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies &amp; Aerospace Database‎ (1962 - current)</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest Computer Science Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Nursing &amp; Allied Health Database (Alumni Edition)</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Biological Sciences</collection><collection>Computer and Information Systems Abstracts – Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Biological Science Database</collection><collection>Nursing &amp; Allied Health Premium</collection><collection>ProQuest advanced technologies &amp; aerospace journals</collection><collection>ProQuest Advanced Technologies &amp; Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest Central (New)</collection><collection>ProQuest One Academic (New)</collection><collection>ProQuest Health &amp; Medical Research Collection</collection><collection>ProQuest One Academic Middle East (New)</collection><collection>ProQuest One Health &amp; Nursing</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Applied &amp; Life Sciences</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of digital imaging</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sijilmassi, Ouafa</au><au>López Alonso, José-Manuel</au><au>Del Río Sevilla, Aurora</au><au>Barrio Asensio, María del Carmen</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Multispectral Imaging Method for Rapid Identification and Analysis of Paraffin-Embedded Pathological Tissues</atitle><jtitle>Journal of digital imaging</jtitle><stitle>J Digit Imaging</stitle><addtitle>J Digit Imaging</addtitle><date>2023-08-01</date><risdate>2023</risdate><volume>36</volume><issue>4</issue><spage>1663</spage><epage>1674</epage><pages>1663-1674</pages><issn>1618-727X</issn><issn>0897-1889</issn><eissn>1618-727X</eissn><abstract>The study of the interaction between light and biological tissue is of great help in the identification of diseases as well as structural alterations in tissues. In the present study, we have developed a tissue diagnostic technique by using multispectral imaging in the visible spectrum combined with principal component analysis (PCA). We used information from the propagation of light through paraffin-embedded tissues to assess differences in the eye tissues of control mouse embryos compared to mouse embryos whose mothers were deprived of folic acid (FA), a crucial vitamin necessary for the growth and development of the fetus. After acquiring the endmembers from the multispectral images, spectral unmixing was used to identify the abundances of those endmembers in each pixel. For each acquired image, the final analysis was performed by performing a pixel-by-pixel and wavelength-by-wavelength absorbance calculation. Non-negative least squares (NNLS) were used in this research. The abundance maps obtained for the first endmember revealed vascular alterations (vitreous and choroid) in the embryos with maternal FA deficiency. However, the abundance maps obtained for the third endmember showed alterations in the texture of some tissues such as the lens and retina. Results indicated that multispectral imaging applied to paraffin-embedded tissues enhanced tissue visualization. Using this method, first, it can be seen tissue damage location and then decide what kind of biological techniques to apply.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><pmid>37072579</pmid><doi>10.1007/s10278-023-00826-9</doi><tpages>12</tpages><orcidid>https://orcid.org/0000-0002-8475-2642</orcidid><orcidid>https://orcid.org/0000-0001-6349-1845</orcidid><orcidid>https://orcid.org/0000-0003-0513-0229</orcidid><orcidid>https://orcid.org/0000-0001-7619-8656</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1618-727X
ispartof Journal of digital imaging, 2023-08, Vol.36 (4), p.1663-1674
issn 1618-727X
0897-1889
1618-727X
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10406798
source NCBI_PubMed Central(免费); Springer Nature
subjects Animal tissues
Cameras
Damage detection
Digital imaging
Embryos
Eye lens
Fetuses
Folic acid
Image acquisition
Image processing
Imaging
Light
Medical imaging
Medicine
Medicine & Public Health
Optometry
Paraffin
Paraffins
Pixels
Principal components analysis
Radiology
Tissues
Visible spectrum
Vitamin B
Wavelength
title Multispectral Imaging Method for Rapid Identification and Analysis of Paraffin-Embedded Pathological Tissues
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-24T07%3A50%3A43IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Multispectral%20Imaging%20Method%20for%20Rapid%20Identification%20and%20Analysis%20of%20Paraffin-Embedded%20Pathological%20Tissues&rft.jtitle=Journal%20of%20digital%20imaging&rft.au=Sijilmassi,%20Ouafa&rft.date=2023-08-01&rft.volume=36&rft.issue=4&rft.spage=1663&rft.epage=1674&rft.pages=1663-1674&rft.issn=1618-727X&rft.eissn=1618-727X&rft_id=info:doi/10.1007/s10278-023-00826-9&rft_dat=%3Cproquest_pubme%3E2847144813%3C/proquest_pubme%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c475t-1df9a66f53e728d8680f186167aa07d77e2ecf3ca3e61bb4aa9a17e6025f51db3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2847144813&rft_id=info:pmid/37072579&rfr_iscdi=true