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Resolution of RHCE Haplotype Ambiguities in Transfusion Settings
Red blood cell (RBC) transfusion, limited by patient alloimmunization, demands accurate blood group typing. The Rh system requires specific attention due to the limitations of serological phenotyping methods. Although these have been compensated for by molecular biology solutions, some RhCE ambiguit...
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Published in: | International journal of molecular sciences 2024-05, Vol.25 (11), p.5868 |
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creator | Izard, Caroline Laget, Laurine Beley, Sophie Bichel, Nelly De Boisgrollier, Lugdivine Picard, Christophe Chiaroni, Jacques Di Cristofaro, Julie |
description | Red blood cell (RBC) transfusion, limited by patient alloimmunization, demands accurate blood group typing. The Rh system requires specific attention due to the limitations of serological phenotyping methods. Although these have been compensated for by molecular biology solutions, some RhCE ambiguities remain unresolved. The
mRNA length is compatible with full-length analysis and haplotype discrimination, but the
mRNA analyses reported so far are based on reticulocyte isolation and molecular biology protocols that are fastidious to implement in a routine context. We aim to present the most efficient reticulocyte isolation method, combined with an RT-PCR sequencing protocol that embraces the phasing of all haplotype configurations and identification of any allele. Two protocols were tested for reticulocyte isolation based either on their size/density properties or on their specific antigenicity. We show that the reticulocyte sorting method by antigen specificity from EDTA blood samples collected up to 48 h before processing is the most efficient and that the combination of an
-specific RT-PCR followed by
allele-specific sequencing enables analysis of cDNA
haplotypes. All samples analyzed show full concordance between
phenotype and haplotype sequencing. Two samples from the immunohematology laboratory with ambiguous results were successfully analyzed and resolved, one of them displaying a novel
allele (
*03 c.340C>T). |
doi_str_mv | 10.3390/ijms25115868 |
format | article |
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mRNA length is compatible with full-length analysis and haplotype discrimination, but the
mRNA analyses reported so far are based on reticulocyte isolation and molecular biology protocols that are fastidious to implement in a routine context. We aim to present the most efficient reticulocyte isolation method, combined with an RT-PCR sequencing protocol that embraces the phasing of all haplotype configurations and identification of any allele. Two protocols were tested for reticulocyte isolation based either on their size/density properties or on their specific antigenicity. We show that the reticulocyte sorting method by antigen specificity from EDTA blood samples collected up to 48 h before processing is the most efficient and that the combination of an
-specific RT-PCR followed by
allele-specific sequencing enables analysis of cDNA
haplotypes. All samples analyzed show full concordance between
phenotype and haplotype sequencing. Two samples from the immunohematology laboratory with ambiguous results were successfully analyzed and resolved, one of them displaying a novel
allele (
*03 c.340C>T).</description><identifier>ISSN: 1422-0067</identifier><identifier>ISSN: 1661-6596</identifier><identifier>EISSN: 1422-0067</identifier><identifier>DOI: 10.3390/ijms25115868</identifier><identifier>PMID: 38892055</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Alleles ; Ambiguity ; Antigens ; Blood groups ; Blood Transfusion - methods ; Ethylenediaminetetraacetic acid ; Genotype & phenotype ; Haplotypes ; Hematopoietic stem cells ; Humans ; Life Sciences ; Molecular biology ; Phenotype ; Polymorphism ; Reticulocytes - metabolism ; Rh-Hr Blood-Group System - genetics ; RNA, Messenger - genetics ; Serology ; Sickle cell anemia ; Transplantation</subject><ispartof>International journal of molecular sciences, 2024-05, Vol.25 (11), p.5868</ispartof><rights>COPYRIGHT 2024 MDPI AG</rights><rights>2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Attribution</rights><rights>2024 by the authors. 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c401t-53b44bd63b4a3f3ac88f3a90471c2d0cbc0e9178e6b08478e85198e9e14bd9383</cites><orcidid>0000-0001-7867-6455</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/3067476575/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/3067476575?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25731,27901,27902,36989,36990,44566,53766,53768,74869</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38892055$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-04621642$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Izard, Caroline</creatorcontrib><creatorcontrib>Laget, Laurine</creatorcontrib><creatorcontrib>Beley, Sophie</creatorcontrib><creatorcontrib>Bichel, Nelly</creatorcontrib><creatorcontrib>De Boisgrollier, Lugdivine</creatorcontrib><creatorcontrib>Picard, Christophe</creatorcontrib><creatorcontrib>Chiaroni, Jacques</creatorcontrib><creatorcontrib>Di Cristofaro, Julie</creatorcontrib><title>Resolution of RHCE Haplotype Ambiguities in Transfusion Settings</title><title>International journal of molecular sciences</title><addtitle>Int J Mol Sci</addtitle><description>Red blood cell (RBC) transfusion, limited by patient alloimmunization, demands accurate blood group typing. The Rh system requires specific attention due to the limitations of serological phenotyping methods. Although these have been compensated for by molecular biology solutions, some RhCE ambiguities remain unresolved. The
mRNA length is compatible with full-length analysis and haplotype discrimination, but the
mRNA analyses reported so far are based on reticulocyte isolation and molecular biology protocols that are fastidious to implement in a routine context. We aim to present the most efficient reticulocyte isolation method, combined with an RT-PCR sequencing protocol that embraces the phasing of all haplotype configurations and identification of any allele. Two protocols were tested for reticulocyte isolation based either on their size/density properties or on their specific antigenicity. We show that the reticulocyte sorting method by antigen specificity from EDTA blood samples collected up to 48 h before processing is the most efficient and that the combination of an
-specific RT-PCR followed by
allele-specific sequencing enables analysis of cDNA
haplotypes. All samples analyzed show full concordance between
phenotype and haplotype sequencing. Two samples from the immunohematology laboratory with ambiguous results were successfully analyzed and resolved, one of them displaying a novel
allele (
*03 c.340C>T).</description><subject>Alleles</subject><subject>Ambiguity</subject><subject>Antigens</subject><subject>Blood groups</subject><subject>Blood Transfusion - methods</subject><subject>Ethylenediaminetetraacetic acid</subject><subject>Genotype & phenotype</subject><subject>Haplotypes</subject><subject>Hematopoietic stem cells</subject><subject>Humans</subject><subject>Life Sciences</subject><subject>Molecular biology</subject><subject>Phenotype</subject><subject>Polymorphism</subject><subject>Reticulocytes - metabolism</subject><subject>Rh-Hr Blood-Group System - genetics</subject><subject>RNA, Messenger - genetics</subject><subject>Serology</subject><subject>Sickle cell anemia</subject><subject>Transplantation</subject><issn>1422-0067</issn><issn>1661-6596</issn><issn>1422-0067</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNptkstrGzEQxkVpadK0t57LQi8p1Knej1NiTFoXDIU8zkIrzzoyu5K72g3kv68Wp6kTikAjRr_vm5EYhD4SfMaYwd_CtstUECK01K_QMeGUzjCW6vXB-Qi9y3mLMWVUmLfoiGltKBbiGF1cQU7tOIQUq9RUV8vFZbV0uzYNDzuo5l0dNmMYAuQqxOqmdzE3Y57gaxiGEDf5PXrTuDbDh8d4gm6_X94slrPVrx8_F_PVzHNMhplgNef1WpbgWMOc17rsBnNFPF1jX3sMhigNssaal6gFMRoMkKIyTLMTdL733Y11B2sPcehda3d96Fz_YJML9vlNDHd2k-4tIURRpXlx-LJ3uHuhW85XdsphLimRnN6Twp4-VuvT7xHyYLuQPbSti5DGbBlWWBkj5dTY5xfoNo19LH9RKKm4kkKJf9TGtWBDbFJp0k-mdq6M0kYzMpU9-w9V1hq64FOEJpT8M8HXvcD3KecemqeHEWyn8bCH41HwT4ef-AT_nQf2B-1dsxU</recordid><startdate>20240528</startdate><enddate>20240528</enddate><creator>Izard, Caroline</creator><creator>Laget, Laurine</creator><creator>Beley, Sophie</creator><creator>Bichel, Nelly</creator><creator>De Boisgrollier, Lugdivine</creator><creator>Picard, Christophe</creator><creator>Chiaroni, Jacques</creator><creator>Di Cristofaro, Julie</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>MBDVC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-7867-6455</orcidid></search><sort><creationdate>20240528</creationdate><title>Resolution of RHCE Haplotype Ambiguities in Transfusion Settings</title><author>Izard, Caroline ; 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The Rh system requires specific attention due to the limitations of serological phenotyping methods. Although these have been compensated for by molecular biology solutions, some RhCE ambiguities remain unresolved. The
mRNA length is compatible with full-length analysis and haplotype discrimination, but the
mRNA analyses reported so far are based on reticulocyte isolation and molecular biology protocols that are fastidious to implement in a routine context. We aim to present the most efficient reticulocyte isolation method, combined with an RT-PCR sequencing protocol that embraces the phasing of all haplotype configurations and identification of any allele. Two protocols were tested for reticulocyte isolation based either on their size/density properties or on their specific antigenicity. We show that the reticulocyte sorting method by antigen specificity from EDTA blood samples collected up to 48 h before processing is the most efficient and that the combination of an
-specific RT-PCR followed by
allele-specific sequencing enables analysis of cDNA
haplotypes. All samples analyzed show full concordance between
phenotype and haplotype sequencing. Two samples from the immunohematology laboratory with ambiguous results were successfully analyzed and resolved, one of them displaying a novel
allele (
*03 c.340C>T).</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>38892055</pmid><doi>10.3390/ijms25115868</doi><orcidid>https://orcid.org/0000-0001-7867-6455</orcidid><oa>free_for_read</oa></addata></record> |
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source | Publicly Available Content (ProQuest); PubMed Central |
subjects | Alleles Ambiguity Antigens Blood groups Blood Transfusion - methods Ethylenediaminetetraacetic acid Genotype & phenotype Haplotypes Hematopoietic stem cells Humans Life Sciences Molecular biology Phenotype Polymorphism Reticulocytes - metabolism Rh-Hr Blood-Group System - genetics RNA, Messenger - genetics Serology Sickle cell anemia Transplantation |
title | Resolution of RHCE Haplotype Ambiguities in Transfusion Settings |
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