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C. elegans LIN-66 mediates EIF-3/eIF3-dependent protein translation via a cold-shock domain
Protein translation initiation is a conserved process involving many proteins acting in concert. The 13 subunit eukaryotic initiation factor 3 (eIF3) complex is essential for assembly of the pre-initiation complex that scans mRNA and positions ribosome at the initiation codon. We previously reported...
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Published in: | Life science alliance 2024-09, Vol.7 (9), p.e202402673 |
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creator | Blazie, Stephen M Fortunati, Daniel Zhao, Yan Jin, Yishi |
description | Protein translation initiation is a conserved process involving many proteins acting in concert. The 13 subunit eukaryotic initiation factor 3 (eIF3) complex is essential for assembly of the pre-initiation complex that scans mRNA and positions ribosome at the initiation codon. We previously reported that a gain-of-function (gf) mutation affecting the G subunit of the
eIF3 complex,
, selectively modulates protein translation in the ventral cord cholinergic motor neurons. Here, through unbiased genetic suppressor screening, we identified that the gene
mediates
(
)-dependent protein translation in motor neurons. LIN-66 is composed largely of low-complexity amino acid sequences with unknown functional domains. We combined bioinformatics analysis with in vivo functional dissection and identified a cold-shock domain in LIN-66 critical for its function. In cholinergic motor neurons, LIN-66 shows a close association with EIF-3.G in the cytoplasm. The low-complexity amino acid sequences of LIN-66 modulate its subcellular pattern. As cold-shock domains function broadly in RNA regulation, we propose that LIN-66 mediates stimulus-dependent protein translation by facilitating the interaction of mRNAs with EIF-3.G. |
doi_str_mv | 10.26508/lsa.202402673 |
format | article |
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eIF3 complex,
, selectively modulates protein translation in the ventral cord cholinergic motor neurons. Here, through unbiased genetic suppressor screening, we identified that the gene
mediates
(
)-dependent protein translation in motor neurons. LIN-66 is composed largely of low-complexity amino acid sequences with unknown functional domains. We combined bioinformatics analysis with in vivo functional dissection and identified a cold-shock domain in LIN-66 critical for its function. In cholinergic motor neurons, LIN-66 shows a close association with EIF-3.G in the cytoplasm. The low-complexity amino acid sequences of LIN-66 modulate its subcellular pattern. As cold-shock domains function broadly in RNA regulation, we propose that LIN-66 mediates stimulus-dependent protein translation by facilitating the interaction of mRNAs with EIF-3.G.</description><identifier>ISSN: 2575-1077</identifier><identifier>EISSN: 2575-1077</identifier><identifier>DOI: 10.26508/lsa.202402673</identifier><identifier>PMID: 38886018</identifier><language>eng</language><publisher>United States: Life Science Alliance LLC</publisher><subject>Amino Acid Sequence ; Animals ; Caenorhabditis elegans - genetics ; Caenorhabditis elegans - metabolism ; Caenorhabditis elegans Proteins - genetics ; Caenorhabditis elegans Proteins - metabolism ; Cold-Shock Response ; Eukaryotic Initiation Factor-3 - genetics ; Eukaryotic Initiation Factor-3 - metabolism ; Motor Neurons - metabolism ; Mutation ; Protein Biosynthesis ; Protein Domains ; RNA, Messenger - genetics ; RNA, Messenger - metabolism</subject><ispartof>Life science alliance, 2024-09, Vol.7 (9), p.e202402673</ispartof><rights>2024 Blazie et al.</rights><rights>2024 Blazie et al. 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c306t-e8945849751a62275c30953e092812fd37c191c8478dd6be07c55a510e6592dc3</cites><orcidid>0000-0002-9371-9860 ; 0000-0001-6701-6275 ; 0000-0002-6339-1905</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11184513/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11184513/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38886018$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Blazie, Stephen M</creatorcontrib><creatorcontrib>Fortunati, Daniel</creatorcontrib><creatorcontrib>Zhao, Yan</creatorcontrib><creatorcontrib>Jin, Yishi</creatorcontrib><title>C. elegans LIN-66 mediates EIF-3/eIF3-dependent protein translation via a cold-shock domain</title><title>Life science alliance</title><addtitle>Life Sci Alliance</addtitle><description>Protein translation initiation is a conserved process involving many proteins acting in concert. The 13 subunit eukaryotic initiation factor 3 (eIF3) complex is essential for assembly of the pre-initiation complex that scans mRNA and positions ribosome at the initiation codon. We previously reported that a gain-of-function (gf) mutation affecting the G subunit of the
eIF3 complex,
, selectively modulates protein translation in the ventral cord cholinergic motor neurons. Here, through unbiased genetic suppressor screening, we identified that the gene
mediates
(
)-dependent protein translation in motor neurons. LIN-66 is composed largely of low-complexity amino acid sequences with unknown functional domains. We combined bioinformatics analysis with in vivo functional dissection and identified a cold-shock domain in LIN-66 critical for its function. In cholinergic motor neurons, LIN-66 shows a close association with EIF-3.G in the cytoplasm. The low-complexity amino acid sequences of LIN-66 modulate its subcellular pattern. As cold-shock domains function broadly in RNA regulation, we propose that LIN-66 mediates stimulus-dependent protein translation by facilitating the interaction of mRNAs with EIF-3.G.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Caenorhabditis elegans - genetics</subject><subject>Caenorhabditis elegans - metabolism</subject><subject>Caenorhabditis elegans Proteins - genetics</subject><subject>Caenorhabditis elegans Proteins - metabolism</subject><subject>Cold-Shock Response</subject><subject>Eukaryotic Initiation Factor-3 - genetics</subject><subject>Eukaryotic Initiation Factor-3 - metabolism</subject><subject>Motor Neurons - metabolism</subject><subject>Mutation</subject><subject>Protein Biosynthesis</subject><subject>Protein Domains</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Messenger - metabolism</subject><issn>2575-1077</issn><issn>2575-1077</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNpVUU1LAzEQDaKoaK8eJUcvWyfJ5mNPIsVqoehFTx5CTKYa3W7qZiv47w1ai8LADDPvvXnwCDlhMOZKgjlvsxtz4DVwpcUOOeRSy4qB1rt_5gMyyvkVAHipWtb75EAYYxQwc0geJ2OKLT67LtP57LZSii4xRDdgplezaSXOcTYVVcAVdgG7ga76NGDs6NAXSuuGmDr6ER111Kc2VPkl-Tca0tLF7pjsLVybcbTpR-RhenU_uanmd9ezyeW88gLUUKFpamnqRkvmFOdalnUjBULDDeOLILRnDfOm1iYE9YSgvZROMkAlGx68OCIXP7qr9VMx74vN3rV21cel6z9tctH-v3TxxT6nD8sYM7VkoiicbRT69L7GPNhlzB7b1nWY1tkK0KAbATUv0PEP1Pcp5x4X2z8M7HcqtqRit6kUwulfd1v4bwbiC5p1hek</recordid><startdate>20240901</startdate><enddate>20240901</enddate><creator>Blazie, Stephen M</creator><creator>Fortunati, Daniel</creator><creator>Zhao, Yan</creator><creator>Jin, Yishi</creator><general>Life Science Alliance LLC</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-9371-9860</orcidid><orcidid>https://orcid.org/0000-0001-6701-6275</orcidid><orcidid>https://orcid.org/0000-0002-6339-1905</orcidid></search><sort><creationdate>20240901</creationdate><title>C. elegans LIN-66 mediates EIF-3/eIF3-dependent protein translation via a cold-shock domain</title><author>Blazie, Stephen M ; Fortunati, Daniel ; Zhao, Yan ; Jin, Yishi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c306t-e8945849751a62275c30953e092812fd37c191c8478dd6be07c55a510e6592dc3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Caenorhabditis elegans - genetics</topic><topic>Caenorhabditis elegans - metabolism</topic><topic>Caenorhabditis elegans Proteins - genetics</topic><topic>Caenorhabditis elegans Proteins - metabolism</topic><topic>Cold-Shock Response</topic><topic>Eukaryotic Initiation Factor-3 - genetics</topic><topic>Eukaryotic Initiation Factor-3 - metabolism</topic><topic>Motor Neurons - metabolism</topic><topic>Mutation</topic><topic>Protein Biosynthesis</topic><topic>Protein Domains</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Messenger - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Blazie, Stephen M</creatorcontrib><creatorcontrib>Fortunati, Daniel</creatorcontrib><creatorcontrib>Zhao, Yan</creatorcontrib><creatorcontrib>Jin, Yishi</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Life science alliance</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Blazie, Stephen M</au><au>Fortunati, Daniel</au><au>Zhao, Yan</au><au>Jin, Yishi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>C. elegans LIN-66 mediates EIF-3/eIF3-dependent protein translation via a cold-shock domain</atitle><jtitle>Life science alliance</jtitle><addtitle>Life Sci Alliance</addtitle><date>2024-09-01</date><risdate>2024</risdate><volume>7</volume><issue>9</issue><spage>e202402673</spage><pages>e202402673-</pages><issn>2575-1077</issn><eissn>2575-1077</eissn><abstract>Protein translation initiation is a conserved process involving many proteins acting in concert. The 13 subunit eukaryotic initiation factor 3 (eIF3) complex is essential for assembly of the pre-initiation complex that scans mRNA and positions ribosome at the initiation codon. We previously reported that a gain-of-function (gf) mutation affecting the G subunit of the
eIF3 complex,
, selectively modulates protein translation in the ventral cord cholinergic motor neurons. Here, through unbiased genetic suppressor screening, we identified that the gene
mediates
(
)-dependent protein translation in motor neurons. LIN-66 is composed largely of low-complexity amino acid sequences with unknown functional domains. We combined bioinformatics analysis with in vivo functional dissection and identified a cold-shock domain in LIN-66 critical for its function. In cholinergic motor neurons, LIN-66 shows a close association with EIF-3.G in the cytoplasm. The low-complexity amino acid sequences of LIN-66 modulate its subcellular pattern. As cold-shock domains function broadly in RNA regulation, we propose that LIN-66 mediates stimulus-dependent protein translation by facilitating the interaction of mRNAs with EIF-3.G.</abstract><cop>United States</cop><pub>Life Science Alliance LLC</pub><pmid>38886018</pmid><doi>10.26508/lsa.202402673</doi><orcidid>https://orcid.org/0000-0002-9371-9860</orcidid><orcidid>https://orcid.org/0000-0001-6701-6275</orcidid><orcidid>https://orcid.org/0000-0002-6339-1905</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Animals Caenorhabditis elegans - genetics Caenorhabditis elegans - metabolism Caenorhabditis elegans Proteins - genetics Caenorhabditis elegans Proteins - metabolism Cold-Shock Response Eukaryotic Initiation Factor-3 - genetics Eukaryotic Initiation Factor-3 - metabolism Motor Neurons - metabolism Mutation Protein Biosynthesis Protein Domains RNA, Messenger - genetics RNA, Messenger - metabolism |
title | C. elegans LIN-66 mediates EIF-3/eIF3-dependent protein translation via a cold-shock domain |
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