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Transcriptional regulation of the human cystathionine beta-synthase -1b basal promoter: synergistic transactivation by transcription factors NF-Y and Sp1/Sp3
Cystathionine beta-synthase (CBS) catalyses the condensation of serine and homocysteine to form cystathionine, an intermediate step in the synthesis of cysteine. Human CBS encodes five distinct 5' non-coding exons, the most frequent termed CBS -1a and CBS -1b, each transcribed from its own uniq...
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Published in: | Biochemical journal 2001-07, Vol.357 (Pt 1), p.97-105 |
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description | Cystathionine beta-synthase (CBS) catalyses the condensation of serine and homocysteine to form cystathionine, an intermediate step in the synthesis of cysteine. Human CBS encodes five distinct 5' non-coding exons, the most frequent termed CBS -1a and CBS -1b, each transcribed from its own unique GC-rich TATA-less promoter. The minimal transcriptional region (-3792 to -3667) of the CBS -1b promoter was defined by 5'- and 3'-deletions, and transient transfections of reporter gene constructs in HepG2 cells, characterized by CBS transcription exclusively from the -1b promoter. Included in this 125 bp region are 3 GC-boxes (termed GC-a, GC-b and GC-c), an inverted CAAT-box and an E-box. By gel-shift and supershift assays, binding of specificity protein (Sp)1 and Sp3 to the GC-box elements, upstream stimulatory factor 1 (USF-1) to the E-box, and both nuclear factor (NF)-Y and an NF-1-like factor to the CAAT box could be demonstrated. By transient trans fections and reporter gene assays in HepG2 and Drosophila SL2 cells, a functional interplay was indicated between NF-Y binding to the CAAT-box, or between USF-1 binding to the E-box, and Sp1/Sp3 binding to the GC-box elements. In SL2 cells, NF-Y and Sp1/Sp3 were synergistic. Furthermore, both Sp1 and the long Sp3 isoform transactivated the CBS -1b minimal promoter; however, the short Sp3 isoforms were potent repressors. These results may explain the cell- or tissue-specific regulation of CBS transcription, and clarify the bases for alterations in CBS gene expression in human disease and Down's syndrome. |
doi_str_mv | 10.1042/0264-6021:3570097 |
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Human CBS encodes five distinct 5' non-coding exons, the most frequent termed CBS -1a and CBS -1b, each transcribed from its own unique GC-rich TATA-less promoter. The minimal transcriptional region (-3792 to -3667) of the CBS -1b promoter was defined by 5'- and 3'-deletions, and transient transfections of reporter gene constructs in HepG2 cells, characterized by CBS transcription exclusively from the -1b promoter. Included in this 125 bp region are 3 GC-boxes (termed GC-a, GC-b and GC-c), an inverted CAAT-box and an E-box. By gel-shift and supershift assays, binding of specificity protein (Sp)1 and Sp3 to the GC-box elements, upstream stimulatory factor 1 (USF-1) to the E-box, and both nuclear factor (NF)-Y and an NF-1-like factor to the CAAT box could be demonstrated. By transient trans fections and reporter gene assays in HepG2 and Drosophila SL2 cells, a functional interplay was indicated between NF-Y binding to the CAAT-box, or between USF-1 binding to the E-box, and Sp1/Sp3 binding to the GC-box elements. In SL2 cells, NF-Y and Sp1/Sp3 were synergistic. Furthermore, both Sp1 and the long Sp3 isoform transactivated the CBS -1b minimal promoter; however, the short Sp3 isoforms were potent repressors. These results may explain the cell- or tissue-specific regulation of CBS transcription, and clarify the bases for alterations in CBS gene expression in human disease and Down's syndrome.</description><identifier>ISSN: 0264-6021</identifier><identifier>EISSN: 1470-8728</identifier><identifier>DOI: 10.1042/0264-6021:3570097</identifier><identifier>PMID: 11415440</identifier><language>eng</language><publisher>England</publisher><subject>Base Sequence ; Binding Sites ; CBS gene ; CCAAT-Binding Factor - metabolism ; Cystathionine ^b-synthase ; Cystathionine beta-Synthase - genetics ; Drosophila melanogaster ; Exons ; Gene Expression Regulation, Enzymologic ; Humans ; Introns ; Molecular Sequence Data ; NF-Y gene ; Oligodeoxyribonucleotides - chemistry ; Promoter Regions, Genetic ; Recombinant Proteins - biosynthesis ; Regulatory Sequences, Nucleic Acid ; Reverse Transcriptase Polymerase Chain Reaction ; Sp1 gene ; Sp1 Transcription Factor - metabolism ; Transcription, Genetic ; Transcriptional Activation ; Transfection ; Tumor Cells, Cultured</subject><ispartof>Biochemical journal, 2001-07, Vol.357 (Pt 1), p.97-105</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c426t-a78054672a07da18093c4e4f894ffdf62c6f46911a612dfc29c4abbd72c7f1243</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1221932/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1221932/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11415440$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ge, Y</creatorcontrib><creatorcontrib>Konrad, M A</creatorcontrib><creatorcontrib>Matherly, L H</creatorcontrib><creatorcontrib>Taub, J W</creatorcontrib><title>Transcriptional regulation of the human cystathionine beta-synthase -1b basal promoter: synergistic transactivation by transcription factors NF-Y and Sp1/Sp3</title><title>Biochemical journal</title><addtitle>Biochem J</addtitle><description>Cystathionine beta-synthase (CBS) catalyses the condensation of serine and homocysteine to form cystathionine, an intermediate step in the synthesis of cysteine. Human CBS encodes five distinct 5' non-coding exons, the most frequent termed CBS -1a and CBS -1b, each transcribed from its own unique GC-rich TATA-less promoter. The minimal transcriptional region (-3792 to -3667) of the CBS -1b promoter was defined by 5'- and 3'-deletions, and transient transfections of reporter gene constructs in HepG2 cells, characterized by CBS transcription exclusively from the -1b promoter. Included in this 125 bp region are 3 GC-boxes (termed GC-a, GC-b and GC-c), an inverted CAAT-box and an E-box. By gel-shift and supershift assays, binding of specificity protein (Sp)1 and Sp3 to the GC-box elements, upstream stimulatory factor 1 (USF-1) to the E-box, and both nuclear factor (NF)-Y and an NF-1-like factor to the CAAT box could be demonstrated. By transient trans fections and reporter gene assays in HepG2 and Drosophila SL2 cells, a functional interplay was indicated between NF-Y binding to the CAAT-box, or between USF-1 binding to the E-box, and Sp1/Sp3 binding to the GC-box elements. In SL2 cells, NF-Y and Sp1/Sp3 were synergistic. Furthermore, both Sp1 and the long Sp3 isoform transactivated the CBS -1b minimal promoter; however, the short Sp3 isoforms were potent repressors. These results may explain the cell- or tissue-specific regulation of CBS transcription, and clarify the bases for alterations in CBS gene expression in human disease and Down's syndrome.</description><subject>Base Sequence</subject><subject>Binding Sites</subject><subject>CBS gene</subject><subject>CCAAT-Binding Factor - metabolism</subject><subject>Cystathionine ^b-synthase</subject><subject>Cystathionine beta-Synthase - genetics</subject><subject>Drosophila melanogaster</subject><subject>Exons</subject><subject>Gene Expression Regulation, Enzymologic</subject><subject>Humans</subject><subject>Introns</subject><subject>Molecular Sequence Data</subject><subject>NF-Y gene</subject><subject>Oligodeoxyribonucleotides - chemistry</subject><subject>Promoter Regions, Genetic</subject><subject>Recombinant Proteins - biosynthesis</subject><subject>Regulatory Sequences, Nucleic Acid</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>Sp1 gene</subject><subject>Sp1 Transcription Factor - metabolism</subject><subject>Transcription, Genetic</subject><subject>Transcriptional Activation</subject><subject>Transfection</subject><subject>Tumor Cells, Cultured</subject><issn>0264-6021</issn><issn>1470-8728</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><recordid>eNqFUc1u1DAQthCILoUH4IJ84hY643jjpAckVFFAquDQcuBkTRx7Y5SNg-1U2ofhXUm0S4ETp9HM9zMz-hh7ifAGQYoLEJUsKhB4WW4VQKMesQ1KBUWtRP2YbR7wM_Yspe8AKEHCU3aGKHErJWzYz7tIYzLRT9mHkQYe7W4eaG14cDz3lvfznkZuDilT7pe5Hy1vbaYiHcbcU7K8wJa3lBb1FMM-ZBsv-QLauPMpe8PzuoNM9vdH4_ZwHP1ey90Chpj45-viG6ex47cTXtxO5XP2xNGQ7ItTPWdfr9_fXX0sbr58-HT17qYwUlS5IFXDVlZKEKiOsIamNNJKVzfSuc5VwlROVg0iVSg6Z0RjJLVtp4RRDoUsz9nbo-80t3vbGTsu9w16in5P8aADef0vMvpe78K9RiGwKcVi8PpkEMOP2aas9z4ZOww02jAnraCRSjbqv0SsEepmCwsRj0QTQ0rRuodrEPSavl7T1Wu6-pT-onn19xt_FKe4y19nSq7F</recordid><startdate>20010701</startdate><enddate>20010701</enddate><creator>Ge, Y</creator><creator>Konrad, M A</creator><creator>Matherly, L H</creator><creator>Taub, J W</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20010701</creationdate><title>Transcriptional regulation of the human cystathionine beta-synthase -1b basal promoter: synergistic transactivation by transcription factors NF-Y and Sp1/Sp3</title><author>Ge, Y ; Konrad, M A ; Matherly, L H ; Taub, J W</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c426t-a78054672a07da18093c4e4f894ffdf62c6f46911a612dfc29c4abbd72c7f1243</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>Base Sequence</topic><topic>Binding Sites</topic><topic>CBS gene</topic><topic>CCAAT-Binding Factor - metabolism</topic><topic>Cystathionine ^b-synthase</topic><topic>Cystathionine beta-Synthase - genetics</topic><topic>Drosophila melanogaster</topic><topic>Exons</topic><topic>Gene Expression Regulation, Enzymologic</topic><topic>Humans</topic><topic>Introns</topic><topic>Molecular Sequence Data</topic><topic>NF-Y gene</topic><topic>Oligodeoxyribonucleotides - chemistry</topic><topic>Promoter Regions, Genetic</topic><topic>Recombinant Proteins - biosynthesis</topic><topic>Regulatory Sequences, Nucleic Acid</topic><topic>Reverse Transcriptase Polymerase Chain Reaction</topic><topic>Sp1 gene</topic><topic>Sp1 Transcription Factor - metabolism</topic><topic>Transcription, Genetic</topic><topic>Transcriptional Activation</topic><topic>Transfection</topic><topic>Tumor Cells, Cultured</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ge, Y</creatorcontrib><creatorcontrib>Konrad, M A</creatorcontrib><creatorcontrib>Matherly, L H</creatorcontrib><creatorcontrib>Taub, J W</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Biochemical journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ge, Y</au><au>Konrad, M A</au><au>Matherly, L H</au><au>Taub, J W</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Transcriptional regulation of the human cystathionine beta-synthase -1b basal promoter: synergistic transactivation by transcription factors NF-Y and Sp1/Sp3</atitle><jtitle>Biochemical journal</jtitle><addtitle>Biochem J</addtitle><date>2001-07-01</date><risdate>2001</risdate><volume>357</volume><issue>Pt 1</issue><spage>97</spage><epage>105</epage><pages>97-105</pages><issn>0264-6021</issn><eissn>1470-8728</eissn><abstract>Cystathionine beta-synthase (CBS) catalyses the condensation of serine and homocysteine to form cystathionine, an intermediate step in the synthesis of cysteine. Human CBS encodes five distinct 5' non-coding exons, the most frequent termed CBS -1a and CBS -1b, each transcribed from its own unique GC-rich TATA-less promoter. The minimal transcriptional region (-3792 to -3667) of the CBS -1b promoter was defined by 5'- and 3'-deletions, and transient transfections of reporter gene constructs in HepG2 cells, characterized by CBS transcription exclusively from the -1b promoter. Included in this 125 bp region are 3 GC-boxes (termed GC-a, GC-b and GC-c), an inverted CAAT-box and an E-box. By gel-shift and supershift assays, binding of specificity protein (Sp)1 and Sp3 to the GC-box elements, upstream stimulatory factor 1 (USF-1) to the E-box, and both nuclear factor (NF)-Y and an NF-1-like factor to the CAAT box could be demonstrated. By transient trans fections and reporter gene assays in HepG2 and Drosophila SL2 cells, a functional interplay was indicated between NF-Y binding to the CAAT-box, or between USF-1 binding to the E-box, and Sp1/Sp3 binding to the GC-box elements. In SL2 cells, NF-Y and Sp1/Sp3 were synergistic. Furthermore, both Sp1 and the long Sp3 isoform transactivated the CBS -1b minimal promoter; however, the short Sp3 isoforms were potent repressors. These results may explain the cell- or tissue-specific regulation of CBS transcription, and clarify the bases for alterations in CBS gene expression in human disease and Down's syndrome.</abstract><cop>England</cop><pmid>11415440</pmid><doi>10.1042/0264-6021:3570097</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Base Sequence Binding Sites CBS gene CCAAT-Binding Factor - metabolism Cystathionine ^b-synthase Cystathionine beta-Synthase - genetics Drosophila melanogaster Exons Gene Expression Regulation, Enzymologic Humans Introns Molecular Sequence Data NF-Y gene Oligodeoxyribonucleotides - chemistry Promoter Regions, Genetic Recombinant Proteins - biosynthesis Regulatory Sequences, Nucleic Acid Reverse Transcriptase Polymerase Chain Reaction Sp1 gene Sp1 Transcription Factor - metabolism Transcription, Genetic Transcriptional Activation Transfection Tumor Cells, Cultured |
title | Transcriptional regulation of the human cystathionine beta-synthase -1b basal promoter: synergistic transactivation by transcription factors NF-Y and Sp1/Sp3 |
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