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The association of flowering time quantitative trait loci with duplicated regions and candidate loci in Brassica oleracea

A population of 150 doubled haploid lines of rapid cycling Brassica oleracea, derived from an F1 from a var. alboglabra x var. italica cross, was scored for flowering time in two trials. Using information on 82 mapped molecular markers, spread evenly across the nine linkage groups, QTL were identifi...

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Published in:	Genetics (Austin) 1998-09, Vol.150 (1), p.393-401
Main Authors:	Bohuon, E.J.R. (John Innes Centre for Plant Science Research, Norwich, UK.), Ramsay, L.D, Craft, J.A, Arthur, A.E, Marshall, D.F, Lydiate, D.J, Kearsey, M.J
Format:	Article
Language:	English
Subjects:	ADDITIVE EFFECTS Brassica - genetics Brassica - physiology BRASSICA OLERACEA BRASSICA OLERACEA ITALICA BRASSICA OLERACEA VAR. ALBOGLABRA Chromosome Mapping CHROMOSOME MAPS COMPARATIVE MAPPING DOUBLED HAPLOID LINES FLOWERING Flowers & plants GENETIC EFFECTS Genetic Linkage GENETIC MAPPING GENETIC MAPS GENETIC MARKERS GENETIC PARAMETERS GENETIC VARIANCE GENETICS HYBRIDS INTERSPECIFIC HYBRIDIZATION LINES LINKAGE GROUPS LOCI Polymorphism, Genetic Quantitative Trait, Heritable RFLP TIME
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creator	Bohuon, E.J.R. (John Innes Centre for Plant Science Research, Norwich, UK.) Ramsay, L.D Craft, J.A Arthur, A.E Marshall, D.F Lydiate, D.J Kearsey, M.J
description	A population of 150 doubled haploid lines of rapid cycling Brassica oleracea, derived from an F1 from a var. alboglabra x var. italica cross, was scored for flowering time in two trials. Using information on 82 mapped molecular markers, spread evenly across the nine linkage groups, QTL were identified at six locations; one each on linkage groups O2 and O3 and two each on linkage groups O5 and O9. In total, these QTL explained 58 and 93% of the genetical variation in the two trials. Three of these QTL, on linkage groups O2, O3, and O9, were situated in regions showing considerable homology both with each other and with chromosome regions of B. nigra that have been shown to affect flowering time. These same regions are all homologous to a single tract of Arabidopsis chromosome 5, which contains a number of the flowering-related genes, one or more of which may be candidates for the QTL found in Brassica.
doi_str_mv	10.1093/genetics/150.1.393
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ALBOGLABRA ; Chromosome Mapping ; CHROMOSOME MAPS ; COMPARATIVE MAPPING ; DOUBLED HAPLOID LINES ; FLOWERING ; Flowers & plants ; GENETIC EFFECTS ; Genetic Linkage ; GENETIC MAPPING ; GENETIC MAPS ; GENETIC MARKERS ; GENETIC PARAMETERS ; GENETIC VARIANCE ; GENETICS ; HYBRIDS ; INTERSPECIFIC HYBRIDIZATION ; LINES ; LINKAGE GROUPS ; LOCI ; Polymorphism, Genetic ; Quantitative Trait, Heritable ; RFLP ; TIME</subject><ispartof>Genetics (Austin), 1998-09, Vol.150 (1), p.393-401</ispartof><rights>Copyright Genetics Society of America Sep 1998</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c508t-fdf227d2b501b58ccce036f4384fee349090119242ffe596e234da0958e94bd33</citedby><cites>FETCH-LOGICAL-c508t-fdf227d2b501b58ccce036f4384fee349090119242ffe596e234da0958e94bd33</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9725855$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bohuon, E.J.R. 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In total, these QTL explained 58 and 93% of the genetical variation in the two trials. Three of these QTL, on linkage groups O2, O3, and O9, were situated in regions showing considerable homology both with each other and with chromosome regions of B. nigra that have been shown to affect flowering time. These same regions are all homologous to a single tract of Arabidopsis chromosome 5, which contains a number of the flowering-related genes, one or more of which may be candidates for the QTL found in Brassica.</description><subject>ADDITIVE EFFECTS</subject><subject>Brassica - genetics</subject><subject>Brassica - physiology</subject><subject>BRASSICA OLERACEA</subject><subject>BRASSICA OLERACEA ITALICA</subject><subject>BRASSICA OLERACEA VAR. ALBOGLABRA</subject><subject>Chromosome Mapping</subject><subject>CHROMOSOME MAPS</subject><subject>COMPARATIVE MAPPING</subject><subject>DOUBLED HAPLOID LINES</subject><subject>FLOWERING</subject><subject>Flowers & plants</subject><subject>GENETIC EFFECTS</subject><subject>Genetic Linkage</subject><subject>GENETIC MAPPING</subject><subject>GENETIC MAPS</subject><subject>GENETIC MARKERS</subject><subject>GENETIC PARAMETERS</subject><subject>GENETIC VARIANCE</subject><subject>GENETICS</subject><subject>HYBRIDS</subject><subject>INTERSPECIFIC HYBRIDIZATION</subject><subject>LINES</subject><subject>LINKAGE GROUPS</subject><subject>LOCI</subject><subject>Polymorphism, Genetic</subject><subject>Quantitative Trait, Heritable</subject><subject>RFLP</subject><subject>TIME</subject><issn>0016-6731</issn><issn>1943-2631</issn><issn>1943-2631</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><recordid>eNqFkVtrFTEUhYMo9Vj9A4IQfPBt2lxnJi-CFm9Q8MH2OeRkdmZScianSaZD_72Rc6wXBF8S2PvbK3tlIfSSkjNKFD8fYYbibT6nslbOuOKP0IYqwRvWcvoYbQihbdN2nD5Fz3K-IYS0SvYn6ER1TPZSbtD91QTY5BytN8XHGUeHXYgrJD-PuPgd4NvFzMWX2r4DXJLxBYeK49WXCQ_LPnhrCgw4wVgFMjbzgG09_FDLB9TP-H2qr1QSxwDJWDDP0RNnQoYXx_sUXX_8cHXxubn8-unLxbvLxkrSl8YNjrFuYFtJ6Fb21logvHWC98IBcKGIIpQqJphzIFULjIvBkGoTlNgOnJ-itwfd_bLdwWBhrh6C3ie_M-leR-P1n53ZT3qMd5qKlnAiqsCbo0CKtwvkonc-WwjBzBCXrDved6rl5L8gbUXfMU4r-Pov8CYuaa6_oBkVlEmh-gqxA2RTzDmBe1iZEv0jfv0zfl3j11TX-OvQq9_NPowc8_614uTHafUJdN6ZECpN9bqu_xByJmozJp_19TeqVEd6IZTk3wFTMcZW</recordid><startdate>199809</startdate><enddate>199809</enddate><creator>Bohuon, E.J.R. 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source	Freely Accessible Journals; Oxford Journals Online; Alma/SFX Local Collection
subjects	ADDITIVE EFFECTS Brassica - genetics Brassica - physiology BRASSICA OLERACEA BRASSICA OLERACEA ITALICA BRASSICA OLERACEA VAR. ALBOGLABRA Chromosome Mapping CHROMOSOME MAPS COMPARATIVE MAPPING DOUBLED HAPLOID LINES FLOWERING Flowers & plants GENETIC EFFECTS Genetic Linkage GENETIC MAPPING GENETIC MAPS GENETIC MARKERS GENETIC PARAMETERS GENETIC VARIANCE GENETICS HYBRIDS INTERSPECIFIC HYBRIDIZATION LINES LINKAGE GROUPS LOCI Polymorphism, Genetic Quantitative Trait, Heritable RFLP TIME
title	The association of flowering time quantitative trait loci with duplicated regions and candidate loci in Brassica oleracea
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