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Genetic Architecture of Mandible Shape in Mice: Effects of Quantitative Trait Loci Analyzed by Geometric Morphometrics
This study introduces a new multivariate approach for analyzing the effects of quantitative trait loci (QTL) on shape and demonstrates this method for the mouse mandible. We quantified size and shape with the methods of geometric morphometrics, based on Procrustes superimposition of five morphologic...
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Published in: | Genetics (Austin) 2001-02, Vol.157 (2), p.785-802 |
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description | This study introduces a new multivariate approach for analyzing the effects of quantitative trait loci (QTL) on shape and demonstrates this method for the mouse mandible. We quantified size and shape with the methods of geometric morphometrics, based on Procrustes superimposition of five morphological landmarks recorded on each mandible. Interval mapping for F(2) mice originating from an intercross of the LG/J and SM/J inbred strains revealed 12 QTL for size, 25 QTL for shape, and 5 QTL for left-right asymmetry. Multivariate ordination of QTL effects by principal component analysis identified two recurrent features of shape variation, which involved the positions of the coronoid and angular processes relative to each other and to the rest of the mandible. These patterns are reminiscent of the knockout phenotypes of a number of genes involved in mandible development, although only a few of these are possible candidates for QTL in our study. The variation of shape effects among the QTL showed no evidence of clustering into distinct groups, as would be expected from theories of morphological integration. Further, for most QTL, additive and dominance effects on shape were markedly different, implying overdominance for specific features of shape. We conclude that geometric morphometrics offers a promising new approach to address problems at the interface of evolutionary and developmental genetics. |
doi_str_mv | 10.1093/genetics/157.2.785 |
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We quantified size and shape with the methods of geometric morphometrics, based on Procrustes superimposition of five morphological landmarks recorded on each mandible. Interval mapping for F(2) mice originating from an intercross of the LG/J and SM/J inbred strains revealed 12 QTL for size, 25 QTL for shape, and 5 QTL for left-right asymmetry. Multivariate ordination of QTL effects by principal component analysis identified two recurrent features of shape variation, which involved the positions of the coronoid and angular processes relative to each other and to the rest of the mandible. These patterns are reminiscent of the knockout phenotypes of a number of genes involved in mandible development, although only a few of these are possible candidates for QTL in our study. The variation of shape effects among the QTL showed no evidence of clustering into distinct groups, as would be expected from theories of morphological integration. Further, for most QTL, additive and dominance effects on shape were markedly different, implying overdominance for specific features of shape. We conclude that geometric morphometrics offers a promising new approach to address problems at the interface of evolutionary and developmental genetics.</description><identifier>ISSN: 0016-6731</identifier><identifier>ISSN: 1943-2631</identifier><identifier>EISSN: 1943-2631</identifier><identifier>DOI: 10.1093/genetics/157.2.785</identifier><identifier>PMID: 11156997</identifier><identifier>CODEN: GENTAE</identifier><language>eng</language><publisher>United States: Genetics Soc America</publisher><subject>Animals ; Crosses, Genetic ; Evolution ; Evolution, Molecular ; Genetic Variation ; Genetics ; Mandible - physiology ; Mice ; Mice, Knockout ; Models, Anatomic ; Multivariate Analysis ; Phenotype ; Quantitative Trait, Heritable ; Rodents</subject><ispartof>Genetics (Austin), 2001-02, Vol.157 (2), p.785-802</ispartof><rights>Copyright Genetics Society of America Feb 2001</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c553t-30edb1808b3bc19073a597e790c8da7149e2795c6ad6579b62420927798f7eac3</citedby><cites>FETCH-LOGICAL-c553t-30edb1808b3bc19073a597e790c8da7149e2795c6ad6579b62420927798f7eac3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11156997$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Klingenberg, Christian Peter</creatorcontrib><creatorcontrib>Leamy, Larry J</creatorcontrib><creatorcontrib>Routman, Eric J</creatorcontrib><creatorcontrib>Cheverud, James M</creatorcontrib><title>Genetic Architecture of Mandible Shape in Mice: Effects of Quantitative Trait Loci Analyzed by Geometric Morphometrics</title><title>Genetics (Austin)</title><addtitle>Genetics</addtitle><description>This study introduces a new multivariate approach for analyzing the effects of quantitative trait loci (QTL) on shape and demonstrates this method for the mouse mandible. We quantified size and shape with the methods of geometric morphometrics, based on Procrustes superimposition of five morphological landmarks recorded on each mandible. Interval mapping for F(2) mice originating from an intercross of the LG/J and SM/J inbred strains revealed 12 QTL for size, 25 QTL for shape, and 5 QTL for left-right asymmetry. Multivariate ordination of QTL effects by principal component analysis identified two recurrent features of shape variation, which involved the positions of the coronoid and angular processes relative to each other and to the rest of the mandible. These patterns are reminiscent of the knockout phenotypes of a number of genes involved in mandible development, although only a few of these are possible candidates for QTL in our study. The variation of shape effects among the QTL showed no evidence of clustering into distinct groups, as would be expected from theories of morphological integration. Further, for most QTL, additive and dominance effects on shape were markedly different, implying overdominance for specific features of shape. We conclude that geometric morphometrics offers a promising new approach to address problems at the interface of evolutionary and developmental genetics.</description><subject>Animals</subject><subject>Crosses, Genetic</subject><subject>Evolution</subject><subject>Evolution, Molecular</subject><subject>Genetic Variation</subject><subject>Genetics</subject><subject>Mandible - physiology</subject><subject>Mice</subject><subject>Mice, Knockout</subject><subject>Models, Anatomic</subject><subject>Multivariate Analysis</subject><subject>Phenotype</subject><subject>Quantitative Trait, Heritable</subject><subject>Rodents</subject><issn>0016-6731</issn><issn>1943-2631</issn><issn>1943-2631</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><recordid>eNqFkcGO0zAQhiMEYrsLL8ABWRy4peuxazvmgFStloLUCiGWs-U4k8arNCm206o8PdltocCFk2X5m88z82fZK6BToJpfr7HD5F28BqGmbKoK8SSbgJ7xnEkOT7MJpSBzqThcZJcx3lNKpRbF8-wCAITUWk2y3eIoIfPgGp_QpSEg6Wuysl3lyxbJ18ZukfiOrLzDd-S2rkcoPiBfBtsln2zyOyR3wfpElr3zZN7Z9vADK1IeyAL7DaYwfrDqw7Y5XeKL7Flt24gvT-dV9u3D7d3Nx3z5efHpZr7MnRA85ZxiVUJBi5KXDjRV3AqtUGnqisoqmGlkSgsnbSWF0qVkM0Y1U0oXtULr-FX2_ujdDuUGK4ddCrY12-A3NhxMb735-6XzjVn3OwMzCYKLUfD2JAj99wFjMhsfHbat7bAfolFUMk2l_C8ISgkNoEbwzT_gfT-EcWXRMJgBE_zRxo6QC32MAevfLQM1D-GbX-GbMXzDzBj-WPT6z2HPJae0zz02ft3sfUATN7ZtRxzMfr8_m34CuLW7VA</recordid><startdate>20010201</startdate><enddate>20010201</enddate><creator>Klingenberg, Christian Peter</creator><creator>Leamy, Larry J</creator><creator>Routman, Eric J</creator><creator>Cheverud, James M</creator><general>Genetics Soc America</general><general>Genetics Society of America</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>4T-</scope><scope>4U-</scope><scope>7QP</scope><scope>7SS</scope><scope>7TK</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20010201</creationdate><title>Genetic Architecture of Mandible Shape in Mice: Effects of Quantitative Trait Loci Analyzed by Geometric Morphometrics</title><author>Klingenberg, Christian Peter ; 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Further, for most QTL, additive and dominance effects on shape were markedly different, implying overdominance for specific features of shape. We conclude that geometric morphometrics offers a promising new approach to address problems at the interface of evolutionary and developmental genetics.</abstract><cop>United States</cop><pub>Genetics Soc America</pub><pmid>11156997</pmid><doi>10.1093/genetics/157.2.785</doi><tpages>18</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Crosses, Genetic Evolution Evolution, Molecular Genetic Variation Genetics Mandible - physiology Mice Mice, Knockout Models, Anatomic Multivariate Analysis Phenotype Quantitative Trait, Heritable Rodents |
title | Genetic Architecture of Mandible Shape in Mice: Effects of Quantitative Trait Loci Analyzed by Geometric Morphometrics |
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