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The LATERAL ORGAN BOUNDARIES Gene Defines a Novel, Plant-Specific Gene Family
The LATERAL ORGAN BOUNDARIES (LOB) gene in Arabidopsis defines a new conserved protein domain. LOB is expressed in a band of cells at the adaxial base of all lateral organs formed from the shoot apical meristem and at the base of lateral roots. LOB encodes a predicted protein that does not have reco...
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Published in: | Plant physiology (Bethesda) 2002-06, Vol.129 (2), p.747-761 |
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description | The LATERAL ORGAN BOUNDARIES (LOB) gene in Arabidopsis defines a new conserved protein domain. LOB is expressed in a band of cells at the adaxial base of all lateral organs formed from the shoot apical meristem and at the base of lateral roots. LOB encodes a predicted protein that does not have recognizable functional motifs, but that contains a conserved domain (the LOB domain) that is present in 42 other Arabidopsis proteins and in proteins from a variety of other plant species. Proteins showing similarity to the LOB domain were not found outside of plant databases, indicating that this unique protein may play a role in plant-specific processes. Genes encoding LOB domain proteins are expressed in a variety of temporal- and tissue-specific patterns, suggesting that they may function in diverse processes. Loss-of-function LOB mutants have no detectable phenotype under standard growth conditions, suggesting that LOB is functionally redundant or required during growth under specific environmental conditions. Ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility. The expression of LOB at the base of lateral organs suggests a potential role for LOB in lateral organ development. |
doi_str_mv | 10.1104/pp.010926 |
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LOB is expressed in a band of cells at the adaxial base of all lateral organs formed from the shoot apical meristem and at the base of lateral roots. LOB encodes a predicted protein that does not have recognizable functional motifs, but that contains a conserved domain (the LOB domain) that is present in 42 other Arabidopsis proteins and in proteins from a variety of other plant species. Proteins showing similarity to the LOB domain were not found outside of plant databases, indicating that this unique protein may play a role in plant-specific processes. Genes encoding LOB domain proteins are expressed in a variety of temporal- and tissue-specific patterns, suggesting that they may function in diverse processes. Loss-of-function LOB mutants have no detectable phenotype under standard growth conditions, suggesting that LOB is functionally redundant or required during growth under specific environmental conditions. Ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility. The expression of LOB at the base of lateral organs suggests a potential role for LOB in lateral organ development.</description><identifier>ISSN: 0032-0889</identifier><identifier>EISSN: 1532-2548</identifier><identifier>DOI: 10.1104/pp.010926</identifier><identifier>PMID: 12068116</identifier><language>eng</language><publisher>United States: American Society of Plant Biologists</publisher><subject>Alternative Splicing ; Amino Acid Sequence ; Amino acids ; Arabidopsis - genetics ; Arabidopsis - growth & development ; Arabidopsis Proteins - genetics ; Boundaries ; Complementary DNA ; Cotyledons ; Development and Hormone Action ; DNA Transposable Elements - genetics ; DNA, Complementary - chemistry ; DNA, Complementary - genetics ; Environmental conditions ; Flowers ; Gene Expression Regulation, Developmental ; Gene Expression Regulation, Plant ; Genes ; Genomics ; Glucuronidase - genetics ; Glucuronidase - metabolism ; Growth conditions ; Molecular Sequence Data ; Multigene Family - genetics ; Mutation ; Phenotype ; Plant roots ; Plant Roots - genetics ; Plant Roots - growth & development ; Plant Shoots - genetics ; Plant Shoots - growth & development ; Plant species ; Plants ; Plants, Genetically Modified ; Proteins ; Recombinant Fusion Proteins - genetics ; Recombinant Fusion Proteins - metabolism ; Reverse transcriptase polymerase chain reaction ; Sequence Alignment ; Sequence Analysis, DNA ; Sequence Homology, Amino Acid ; Stem cells</subject><ispartof>Plant physiology (Bethesda), 2002-06, Vol.129 (2), p.747-761</ispartof><rights>Copyright 2002 American Society of Plant Biologists</rights><rights>Copyright American Society of Plant Physiologists Jun 2002</rights><rights>Copyright © 2002, American Society of Plant Physiologists 2002</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c490t-ad056354619b286372d8081499357e6301a755ad61957d895870d4dad993643d3</citedby><cites>FETCH-LOGICAL-c490t-ad056354619b286372d8081499357e6301a755ad61957d895870d4dad993643d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/4280502$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/4280502$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,58213,58446</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12068116$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Shuai, Bin</creatorcontrib><creatorcontrib>Reynaga-Peña, Cristina G.</creatorcontrib><creatorcontrib>Springer, Patricia S.</creatorcontrib><title>The LATERAL ORGAN BOUNDARIES Gene Defines a Novel, Plant-Specific Gene Family</title><title>Plant physiology (Bethesda)</title><addtitle>Plant Physiol</addtitle><description>The LATERAL ORGAN BOUNDARIES (LOB) gene in Arabidopsis defines a new conserved protein domain. LOB is expressed in a band of cells at the adaxial base of all lateral organs formed from the shoot apical meristem and at the base of lateral roots. LOB encodes a predicted protein that does not have recognizable functional motifs, but that contains a conserved domain (the LOB domain) that is present in 42 other Arabidopsis proteins and in proteins from a variety of other plant species. Proteins showing similarity to the LOB domain were not found outside of plant databases, indicating that this unique protein may play a role in plant-specific processes. Genes encoding LOB domain proteins are expressed in a variety of temporal- and tissue-specific patterns, suggesting that they may function in diverse processes. Loss-of-function LOB mutants have no detectable phenotype under standard growth conditions, suggesting that LOB is functionally redundant or required during growth under specific environmental conditions. Ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility. The expression of LOB at the base of lateral organs suggests a potential role for LOB in lateral organ development.</description><subject>Alternative Splicing</subject><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - growth & development</subject><subject>Arabidopsis Proteins - genetics</subject><subject>Boundaries</subject><subject>Complementary DNA</subject><subject>Cotyledons</subject><subject>Development and Hormone Action</subject><subject>DNA Transposable Elements - genetics</subject><subject>DNA, Complementary - chemistry</subject><subject>DNA, Complementary - genetics</subject><subject>Environmental conditions</subject><subject>Flowers</subject><subject>Gene Expression Regulation, Developmental</subject><subject>Gene Expression Regulation, Plant</subject><subject>Genes</subject><subject>Genomics</subject><subject>Glucuronidase - genetics</subject><subject>Glucuronidase - metabolism</subject><subject>Growth conditions</subject><subject>Molecular Sequence Data</subject><subject>Multigene Family - genetics</subject><subject>Mutation</subject><subject>Phenotype</subject><subject>Plant roots</subject><subject>Plant Roots - genetics</subject><subject>Plant Roots - growth & development</subject><subject>Plant Shoots - genetics</subject><subject>Plant Shoots - growth & development</subject><subject>Plant species</subject><subject>Plants</subject><subject>Plants, Genetically Modified</subject><subject>Proteins</subject><subject>Recombinant Fusion Proteins - genetics</subject><subject>Recombinant Fusion Proteins - metabolism</subject><subject>Reverse transcriptase polymerase chain reaction</subject><subject>Sequence Alignment</subject><subject>Sequence Analysis, DNA</subject><subject>Sequence Homology, Amino Acid</subject><subject>Stem cells</subject><issn>0032-0889</issn><issn>1532-2548</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2002</creationdate><recordtype>article</recordtype><recordid>eNqF0c9P2zAUB3ALMUHpduCOUMRh0qSFvedfcQ4cMlo6pK6dSjlbJnYhVZqEOK3Ef4-nVIztspMtvc-z_H2PkFOES0Tg35rmEhBSKg_IAAWjMRVcHZIBQLiDUukxOfF-DQDIkB-RY6QgFaIckJ_LJxdNs-V4kU2j-WKSzaLv8_vZKFvcju-iiatcNHKronI-MtGs3rnya_SrNFUX3zUuL1ZF3qMbsynKl4_kw8qU3n3an0NyfzNeXv-Ip_PJ7XU2jXOeQhcbC0IywSWmD1RJllCrQCFPUyYSJxmgSYQwNtRFYlUqVAKWW2MDkJxZNiRX_bvN9mHjbO6qrjWlbtpiY9oXXZtC_12piif9WO80SpSpCv2f9_1t_bx1vtObwueuDMFcvfU6QRVGKOh_ISqOkgsI8OIfuK63bRWGoCmGiCgoD-hLj_K29r51q7cfI-jfm9RNo_tNBnv-PuIfuV9dAGc9WPuubt_qnCoQQNkrXzScvw</recordid><startdate>20020601</startdate><enddate>20020601</enddate><creator>Shuai, Bin</creator><creator>Reynaga-Peña, Cristina G.</creator><creator>Springer, Patricia S.</creator><general>American Society of Plant Biologists</general><general>American Society of Plant Physiologists</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>4T-</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AF</scope><scope>8AO</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M2P</scope><scope>M7P</scope><scope>MBDVC</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>S0X</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20020601</creationdate><title>The LATERAL ORGAN BOUNDARIES Gene Defines a Novel, Plant-Specific Gene Family</title><author>Shuai, Bin ; Reynaga-Peña, Cristina G. ; Springer, Patricia S.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c490t-ad056354619b286372d8081499357e6301a755ad61957d895870d4dad993643d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2002</creationdate><topic>Alternative Splicing</topic><topic>Amino Acid Sequence</topic><topic>Amino acids</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - growth & development</topic><topic>Arabidopsis Proteins - genetics</topic><topic>Boundaries</topic><topic>Complementary DNA</topic><topic>Cotyledons</topic><topic>Development and Hormone Action</topic><topic>DNA Transposable Elements - genetics</topic><topic>DNA, Complementary - chemistry</topic><topic>DNA, Complementary - genetics</topic><topic>Environmental conditions</topic><topic>Flowers</topic><topic>Gene Expression Regulation, Developmental</topic><topic>Gene Expression Regulation, Plant</topic><topic>Genes</topic><topic>Genomics</topic><topic>Glucuronidase - genetics</topic><topic>Glucuronidase - metabolism</topic><topic>Growth conditions</topic><topic>Molecular Sequence Data</topic><topic>Multigene Family - genetics</topic><topic>Mutation</topic><topic>Phenotype</topic><topic>Plant roots</topic><topic>Plant Roots - genetics</topic><topic>Plant Roots - growth & development</topic><topic>Plant Shoots - genetics</topic><topic>Plant Shoots - growth & development</topic><topic>Plant species</topic><topic>Plants</topic><topic>Plants, Genetically Modified</topic><topic>Proteins</topic><topic>Recombinant Fusion Proteins - genetics</topic><topic>Recombinant Fusion Proteins - metabolism</topic><topic>Reverse transcriptase polymerase chain reaction</topic><topic>Sequence Alignment</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Homology, Amino Acid</topic><topic>Stem cells</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Shuai, Bin</creatorcontrib><creatorcontrib>Reynaga-Peña, Cristina G.</creatorcontrib><creatorcontrib>Springer, Patricia S.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Docstoc</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>STEM Database</collection><collection>ProQuest Pharma Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biological Sciences</collection><collection>Agriculture Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest Research Library</collection><collection>ProQuest Science Journals</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>SIRS Editorial</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Plant physiology (Bethesda)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Shuai, Bin</au><au>Reynaga-Peña, Cristina G.</au><au>Springer, Patricia S.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The LATERAL ORGAN BOUNDARIES Gene Defines a Novel, Plant-Specific Gene Family</atitle><jtitle>Plant physiology (Bethesda)</jtitle><addtitle>Plant Physiol</addtitle><date>2002-06-01</date><risdate>2002</risdate><volume>129</volume><issue>2</issue><spage>747</spage><epage>761</epage><pages>747-761</pages><issn>0032-0889</issn><eissn>1532-2548</eissn><abstract>The LATERAL ORGAN BOUNDARIES (LOB) gene in Arabidopsis defines a new conserved protein domain. LOB is expressed in a band of cells at the adaxial base of all lateral organs formed from the shoot apical meristem and at the base of lateral roots. LOB encodes a predicted protein that does not have recognizable functional motifs, but that contains a conserved domain (the LOB domain) that is present in 42 other Arabidopsis proteins and in proteins from a variety of other plant species. Proteins showing similarity to the LOB domain were not found outside of plant databases, indicating that this unique protein may play a role in plant-specific processes. Genes encoding LOB domain proteins are expressed in a variety of temporal- and tissue-specific patterns, suggesting that they may function in diverse processes. Loss-of-function LOB mutants have no detectable phenotype under standard growth conditions, suggesting that LOB is functionally redundant or required during growth under specific environmental conditions. Ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility. The expression of LOB at the base of lateral organs suggests a potential role for LOB in lateral organ development.</abstract><cop>United States</cop><pub>American Society of Plant Biologists</pub><pmid>12068116</pmid><doi>10.1104/pp.010926</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Alternative Splicing Amino Acid Sequence Amino acids Arabidopsis - genetics Arabidopsis - growth & development Arabidopsis Proteins - genetics Boundaries Complementary DNA Cotyledons Development and Hormone Action DNA Transposable Elements - genetics DNA, Complementary - chemistry DNA, Complementary - genetics Environmental conditions Flowers Gene Expression Regulation, Developmental Gene Expression Regulation, Plant Genes Genomics Glucuronidase - genetics Glucuronidase - metabolism Growth conditions Molecular Sequence Data Multigene Family - genetics Mutation Phenotype Plant roots Plant Roots - genetics Plant Roots - growth & development Plant Shoots - genetics Plant Shoots - growth & development Plant species Plants Plants, Genetically Modified Proteins Recombinant Fusion Proteins - genetics Recombinant Fusion Proteins - metabolism Reverse transcriptase polymerase chain reaction Sequence Alignment Sequence Analysis, DNA Sequence Homology, Amino Acid Stem cells |
title | The LATERAL ORGAN BOUNDARIES Gene Defines a Novel, Plant-Specific Gene Family |
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