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Localization of a Gene for Nonsyndromic Renal Hypodysplasia to Chromosome 1p32-33
Nonsyndromic defects in the urinary tract are the most common cause of end-stage renal failure in children and account for a significant proportion of adult nephropathy. The genetic basis of these disorders is not fully understood. We studied seven multiplex kindreds ascertained via an index case wi...
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Published in: | American journal of human genetics 2007-03, Vol.80 (3), p.539-549 |
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creator | Sanna-Cherchi, Simone Caridi, Gianluca Weng, Patricia L. Dagnino, Monica Seri, Marco Konka, Anita Somenzi, Danio Carrea, Alba Izzi, Claudia Casu, Domenica Allegri, Landino Schmidt-Ott, Kai M. Barasch, Jonathan Scolari, Francesco Ravazzolo, Roberto Ghiggeri, Gian Marco Gharavi, Ali G. |
description | Nonsyndromic defects in the urinary tract are the most common cause of end-stage renal failure in children and account for a significant proportion of adult nephropathy. The genetic basis of these disorders is not fully understood. We studied seven multiplex kindreds ascertained via an index case with a nonsyndromic solitary kidney or renal hypodysplasia. Systematic ultrasonographic screening revealed that many family members harbor malformations, such as solitary kidneys, hypodysplasia, or ureteric abnormalities (in a total of 29 affected individuals). A genomewide scan identified significant linkage to a 6.9-Mb segment on chromosome 1p32-33 under an autosomal dominant model with reduced penetrance (peak LOD score 3.5 at
D1S2652 in the largest kindred). Altogether, three of the seven families showed positive LOD scores at this interval, demonstrating heterogeneity of the trait (peak HLOD 3.9, with 45% of families linked). The chromosome 1p32-33 interval contains 52 transcription units, and at least 23 of these are expressed at stage E12.5 in the murine ureteric bud and/or metanephric mesenchyme. These data show that autosomal dominant nonsyndromic renal hypodysplasia and associated urinary tract malformations are genetically heterogeneous and identify a locus for this common cause of human kidney failure. |
doi_str_mv | 10.1086/512248 |
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D1S2652 in the largest kindred). Altogether, three of the seven families showed positive LOD scores at this interval, demonstrating heterogeneity of the trait (peak HLOD 3.9, with 45% of families linked). The chromosome 1p32-33 interval contains 52 transcription units, and at least 23 of these are expressed at stage E12.5 in the murine ureteric bud and/or metanephric mesenchyme. These data show that autosomal dominant nonsyndromic renal hypodysplasia and associated urinary tract malformations are genetically heterogeneous and identify a locus for this common cause of human kidney failure.</description><identifier>ISSN: 0002-9297</identifier><identifier>EISSN: 1537-6605</identifier><identifier>DOI: 10.1086/512248</identifier><identifier>PMID: 17273976</identifier><identifier>CODEN: AJHGAG</identifier><language>eng</language><publisher>Chicago, IL: Elsevier Inc</publisher><subject>Adolescent ; Adult ; Aged ; Aged, 80 and over ; Biological and medical sciences ; Child ; Chromosome Mapping ; Chromosomes ; Chromosomes, Human, Pair 1 - genetics ; Classical genetics, quantitative genetics, hybrids ; Female ; Fundamental and applied biological sciences. Psychology ; General aspects. Genetic counseling ; Genes ; Genes, Dominant - physiology ; Genetic Linkage ; Genetic Markers ; Genetic Predisposition to Disease ; Genetics of eukaryotes. Biological and molecular evolution ; Genotype ; Human ; Humans ; Infant ; Kidney - abnormalities ; Kidney - pathology ; Kidneys ; Lod Score ; Male ; Malformations of the urinary system ; Medical genetics ; Medical sciences ; Middle Aged ; Molecular and cellular biology ; Nephrology. Urinary tract diseases ; Pedigree ; Penetrance ; Ureteral Diseases - genetics ; Urinary tract diseases</subject><ispartof>American journal of human genetics, 2007-03, Vol.80 (3), p.539-549</ispartof><rights>2007 The American Society of Human Genetics</rights><rights>2007 INIST-CNRS</rights><rights>Copyright University of Chicago, acting through its Press Mar 2007</rights><rights>2007 by The American Society of Human Genetics. All rights reserved. 2007</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c462t-9fa25168bc410fb4898faf0390725c64bbb1aa8b49fa301ef316b3e5886ffa9e3</citedby><cites>FETCH-LOGICAL-c462t-9fa25168bc410fb4898faf0390725c64bbb1aa8b49fa301ef316b3e5886ffa9e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1821099/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1821099/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18565411$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17273976$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sanna-Cherchi, Simone</creatorcontrib><creatorcontrib>Caridi, Gianluca</creatorcontrib><creatorcontrib>Weng, Patricia L.</creatorcontrib><creatorcontrib>Dagnino, Monica</creatorcontrib><creatorcontrib>Seri, Marco</creatorcontrib><creatorcontrib>Konka, Anita</creatorcontrib><creatorcontrib>Somenzi, Danio</creatorcontrib><creatorcontrib>Carrea, Alba</creatorcontrib><creatorcontrib>Izzi, Claudia</creatorcontrib><creatorcontrib>Casu, Domenica</creatorcontrib><creatorcontrib>Allegri, Landino</creatorcontrib><creatorcontrib>Schmidt-Ott, Kai M.</creatorcontrib><creatorcontrib>Barasch, Jonathan</creatorcontrib><creatorcontrib>Scolari, Francesco</creatorcontrib><creatorcontrib>Ravazzolo, Roberto</creatorcontrib><creatorcontrib>Ghiggeri, Gian Marco</creatorcontrib><creatorcontrib>Gharavi, Ali G.</creatorcontrib><title>Localization of a Gene for Nonsyndromic Renal Hypodysplasia to Chromosome 1p32-33</title><title>American journal of human genetics</title><addtitle>Am J Hum Genet</addtitle><description>Nonsyndromic defects in the urinary tract are the most common cause of end-stage renal failure in children and account for a significant proportion of adult nephropathy. The genetic basis of these disorders is not fully understood. We studied seven multiplex kindreds ascertained via an index case with a nonsyndromic solitary kidney or renal hypodysplasia. Systematic ultrasonographic screening revealed that many family members harbor malformations, such as solitary kidneys, hypodysplasia, or ureteric abnormalities (in a total of 29 affected individuals). A genomewide scan identified significant linkage to a 6.9-Mb segment on chromosome 1p32-33 under an autosomal dominant model with reduced penetrance (peak LOD score 3.5 at
D1S2652 in the largest kindred). Altogether, three of the seven families showed positive LOD scores at this interval, demonstrating heterogeneity of the trait (peak HLOD 3.9, with 45% of families linked). The chromosome 1p32-33 interval contains 52 transcription units, and at least 23 of these are expressed at stage E12.5 in the murine ureteric bud and/or metanephric mesenchyme. These data show that autosomal dominant nonsyndromic renal hypodysplasia and associated urinary tract malformations are genetically heterogeneous and identify a locus for this common cause of human kidney failure.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Biological and medical sciences</subject><subject>Child</subject><subject>Chromosome Mapping</subject><subject>Chromosomes</subject><subject>Chromosomes, Human, Pair 1 - genetics</subject><subject>Classical genetics, quantitative genetics, hybrids</subject><subject>Female</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>General aspects. Genetic counseling</subject><subject>Genes</subject><subject>Genes, Dominant - physiology</subject><subject>Genetic Linkage</subject><subject>Genetic Markers</subject><subject>Genetic Predisposition to Disease</subject><subject>Genetics of eukaryotes. Biological and molecular evolution</subject><subject>Genotype</subject><subject>Human</subject><subject>Humans</subject><subject>Infant</subject><subject>Kidney - abnormalities</subject><subject>Kidney - pathology</subject><subject>Kidneys</subject><subject>Lod Score</subject><subject>Male</subject><subject>Malformations of the urinary system</subject><subject>Medical genetics</subject><subject>Medical sciences</subject><subject>Middle Aged</subject><subject>Molecular and cellular biology</subject><subject>Nephrology. Urinary tract diseases</subject><subject>Pedigree</subject><subject>Penetrance</subject><subject>Ureteral Diseases - genetics</subject><subject>Urinary tract diseases</subject><issn>0002-9297</issn><issn>1537-6605</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><recordid>eNpd0dFqFDEUBuAgit1WfQQJgr0bzUkmmeRGkEVbYVEUvQ6ZzIlNmUnWZLawPr1TdnG1V7k4H38O5yfkBbA3wLR6K4HzVj8iK5Cia5Ri8jFZMcZ4Y7jpzsh5rbeMAWgmnpIz6HgnTKdW5OsmezfG326OOdEcqKNXmJCGXOjnnOo-DSVP0dNvmNxIr_fbPOzrdnQ1Ojpnur5ZxrnmCSlsBW-EeEaeBDdWfH58L8iPjx--r6-bzZerT-v3m8a3is-NCY5LULr3LbDQt9ro4AIThnVcetX2fQ_O6b5doGCAQYDqBUqtVQjOoLgg7w65210_4eAxzcWNdlvi5MreZhft_5MUb-zPfGdBc2DGLAGXx4CSf-2wznaK1eM4uoR5V63SRmnB7uGrB_A278pyjmo5GKmNkPyU5kuutWD4uwkwe1-RPVS0wJf_7n1ix04W8PoIXF26CcUlH-vJaalkC7A4dnC4XPkuYrHVR0weh1jQz3bI8eHffwC1aafF</recordid><startdate>20070301</startdate><enddate>20070301</enddate><creator>Sanna-Cherchi, Simone</creator><creator>Caridi, Gianluca</creator><creator>Weng, Patricia L.</creator><creator>Dagnino, Monica</creator><creator>Seri, Marco</creator><creator>Konka, Anita</creator><creator>Somenzi, Danio</creator><creator>Carrea, Alba</creator><creator>Izzi, Claudia</creator><creator>Casu, Domenica</creator><creator>Allegri, Landino</creator><creator>Schmidt-Ott, Kai M.</creator><creator>Barasch, Jonathan</creator><creator>Scolari, Francesco</creator><creator>Ravazzolo, Roberto</creator><creator>Ghiggeri, Gian Marco</creator><creator>Gharavi, Ali G.</creator><general>Elsevier Inc</general><general>University of Chicago Press</general><general>Cell Press</general><general>The American Society of Human Genetics</general><scope>6I.</scope><scope>AAFTH</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7TK</scope><scope>7TM</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>K9.</scope><scope>NAPCQ</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20070301</creationdate><title>Localization of a Gene for Nonsyndromic Renal Hypodysplasia to Chromosome 1p32-33</title><author>Sanna-Cherchi, Simone ; Caridi, Gianluca ; Weng, Patricia L. ; Dagnino, Monica ; Seri, Marco ; Konka, Anita ; Somenzi, Danio ; Carrea, Alba ; Izzi, Claudia ; Casu, Domenica ; Allegri, Landino ; Schmidt-Ott, Kai M. ; Barasch, Jonathan ; Scolari, Francesco ; Ravazzolo, Roberto ; Ghiggeri, Gian Marco ; Gharavi, Ali G.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c462t-9fa25168bc410fb4898faf0390725c64bbb1aa8b49fa301ef316b3e5886ffa9e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Aged</topic><topic>Aged, 80 and over</topic><topic>Biological and medical sciences</topic><topic>Child</topic><topic>Chromosome Mapping</topic><topic>Chromosomes</topic><topic>Chromosomes, Human, Pair 1 - genetics</topic><topic>Classical genetics, quantitative genetics, hybrids</topic><topic>Female</topic><topic>Fundamental and applied biological sciences. 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The genetic basis of these disorders is not fully understood. We studied seven multiplex kindreds ascertained via an index case with a nonsyndromic solitary kidney or renal hypodysplasia. Systematic ultrasonographic screening revealed that many family members harbor malformations, such as solitary kidneys, hypodysplasia, or ureteric abnormalities (in a total of 29 affected individuals). A genomewide scan identified significant linkage to a 6.9-Mb segment on chromosome 1p32-33 under an autosomal dominant model with reduced penetrance (peak LOD score 3.5 at
D1S2652 in the largest kindred). Altogether, three of the seven families showed positive LOD scores at this interval, demonstrating heterogeneity of the trait (peak HLOD 3.9, with 45% of families linked). The chromosome 1p32-33 interval contains 52 transcription units, and at least 23 of these are expressed at stage E12.5 in the murine ureteric bud and/or metanephric mesenchyme. These data show that autosomal dominant nonsyndromic renal hypodysplasia and associated urinary tract malformations are genetically heterogeneous and identify a locus for this common cause of human kidney failure.</abstract><cop>Chicago, IL</cop><pub>Elsevier Inc</pub><pmid>17273976</pmid><doi>10.1086/512248</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adolescent Adult Aged Aged, 80 and over Biological and medical sciences Child Chromosome Mapping Chromosomes Chromosomes, Human, Pair 1 - genetics Classical genetics, quantitative genetics, hybrids Female Fundamental and applied biological sciences. Psychology General aspects. Genetic counseling Genes Genes, Dominant - physiology Genetic Linkage Genetic Markers Genetic Predisposition to Disease Genetics of eukaryotes. Biological and molecular evolution Genotype Human Humans Infant Kidney - abnormalities Kidney - pathology Kidneys Lod Score Male Malformations of the urinary system Medical genetics Medical sciences Middle Aged Molecular and cellular biology Nephrology. Urinary tract diseases Pedigree Penetrance Ureteral Diseases - genetics Urinary tract diseases |
title | Localization of a Gene for Nonsyndromic Renal Hypodysplasia to Chromosome 1p32-33 |
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