ProSight PTM 2.0: improved protein identification and characterization for top down mass spectrometry

ProSight PTM 2.0 (http://prosightptm2.scs.uiuc.edu) is the next generation of the ProSight PTM web-based system for the identification and characterization of proteins using top down tandem mass spectrometry. It introduces an entirely new data-driven interface, integrated Sequence Gazer for protein...

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Bibliographic Details
Published in:Nucleic acids research 2007-07, Vol.35 (Web Server issue), p.W701-W706
Main Authors: Zamdborg, Leonid, LeDuc, Richard D, Glowacz, Kevin J, Kim, Yong-Bin, Viswanathan, Vinayak, Spaulding, Ian T, Early, Bryan P, Bluhm, Eric J, Babai, Shannee, Kelleher, Neil L
Format: Article
Language:English
Subjects:
Automatic Data Processing
Computational Biology - methods
Databases, Protein
Humans
Internet
Mass Spectrometry - methods
Polymorphism, Genetic
Programming Languages
Protein Processing, Post-Translational
Proteins - analysis
Proteins - chemistry
Proteins - genetics
Sequence Analysis, Protein
Sequence Tagged Sites
Software
User-Computer Interface
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Summary:ProSight PTM 2.0 (http://prosightptm2.scs.uiuc.edu) is the next generation of the ProSight PTM web-based system for the identification and characterization of proteins using top down tandem mass spectrometry. It introduces an entirely new data-driven interface, integrated Sequence Gazer for protein characterization, support for fixed modifications, terminal modifications and improved support for multiple precursor ions (multiplexing). Furthermore, it supports data import and export for local analysis and collaboration.
ISSN:0305-1048
1362-4962
DOI:10.1093/nar/gkm371