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Crystallization and preliminary X-ray diffraction analysis of the Bacillus subtilis replication termination protein in complex with the 37-base-pair TerI-binding site
The replication terminator protein (RTP) of Bacillus subtilis binds to specific DNA sequences that halt the progression of the replisome in a polar manner. These terminator complexes flank a defined region of the chromosome into which they allow replication forks to enter but not exit. Forcing the f...
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Published in: | Acta crystallographica. Section F, Structural biology and crystallization communications Structural biology and crystallization communications, 2006-11, Vol.62 (11), p.1104-1107 |
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description | The replication terminator protein (RTP) of Bacillus subtilis binds to specific DNA sequences that halt the progression of the replisome in a polar manner. These terminator complexes flank a defined region of the chromosome into which they allow replication forks to enter but not exit. Forcing the fusion of replication forks in a specific zone is thought to allow the coordination of post‐replicative processes. The functional terminator complex comprises two homodimers each of 29 kDa bound to overlapping binding sites. A preparation of RTP and a 37‐base‐pair TerI sequence (comprising two binding sites for RTP) has been purified and crystallized. A data set to 3.9 Å resolution with 97.0% completeness and an Rsym of 12% was collected from a single flash‐cooled crystal using synchrotron radiation. The diffraction data are consistent with space group P622, with unit‐cell parameters a = b = 118.8, c = 142.6 Å. |
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P. ; Porter, C. ; Wilce, J. A. ; Wilce, M. C. J.</creator><creatorcontrib>Vivian, J. P. ; Porter, C. ; Wilce, J. A. ; Wilce, M. C. J.</creatorcontrib><description>The replication terminator protein (RTP) of Bacillus subtilis binds to specific DNA sequences that halt the progression of the replisome in a polar manner. These terminator complexes flank a defined region of the chromosome into which they allow replication forks to enter but not exit. Forcing the fusion of replication forks in a specific zone is thought to allow the coordination of post‐replicative processes. The functional terminator complex comprises two homodimers each of 29 kDa bound to overlapping binding sites. A preparation of RTP and a 37‐base‐pair TerI sequence (comprising two binding sites for RTP) has been purified and crystallized. A data set to 3.9 Å resolution with 97.0% completeness and an Rsym of 12% was collected from a single flash‐cooled crystal using synchrotron radiation. 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P.</creatorcontrib><creatorcontrib>Porter, C.</creatorcontrib><creatorcontrib>Wilce, J. A.</creatorcontrib><creatorcontrib>Wilce, M. C. J.</creatorcontrib><title>Crystallization and preliminary X-ray diffraction analysis of the Bacillus subtilis replication termination protein in complex with the 37-base-pair TerI-binding site</title><title>Acta crystallographica. Section F, Structural biology and crystallization communications</title><addtitle>Acta Cryst. F</addtitle><description>The replication terminator protein (RTP) of Bacillus subtilis binds to specific DNA sequences that halt the progression of the replisome in a polar manner. These terminator complexes flank a defined region of the chromosome into which they allow replication forks to enter but not exit. Forcing the fusion of replication forks in a specific zone is thought to allow the coordination of post‐replicative processes. The functional terminator complex comprises two homodimers each of 29 kDa bound to overlapping binding sites. A preparation of RTP and a 37‐base‐pair TerI sequence (comprising two binding sites for RTP) has been purified and crystallized. A data set to 3.9 Å resolution with 97.0% completeness and an Rsym of 12% was collected from a single flash‐cooled crystal using synchrotron radiation. The diffraction data are consistent with space group P622, with unit‐cell parameters a = b = 118.8, c = 142.6 Å.</description><subject>Bacillus subtilis</subject><subject>Bacillus subtilis - chemistry</subject><subject>Bacillus subtilis - genetics</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - isolation & purification</subject><subject>Base Pairing</subject><subject>Binding Sites</subject><subject>CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY</subject><subject>CRYSTALLIZATION</subject><subject>Crystallization Communications</subject><subject>CRYSTALS</subject><subject>DNA</subject><subject>DNA, Bacterial - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>DNA-Binding Proteins - chemistry</subject><subject>DNA-Binding Proteins - isolation & purification</subject><subject>Mutagenesis, Site-Directed</subject><subject>PROTEINS</subject><subject>Recombinant Proteins - chemistry</subject><subject>replication terminator proteins</subject><subject>RESOLUTION</subject><subject>SPACE GROUPS</subject><subject>SYNCHROTRON RADIATION</subject><subject>TerI</subject><subject>Terminator Regions, Genetic</subject><subject>X-RAY DIFFRACTION</subject><issn>1744-3091</issn><issn>1744-3091</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><recordid>eNqFUk1v1DAQjRCIloUfwAVZQuIWsOM4Ti5I7Yp-oBWoolA4WY4z6RocO9he2uUH8TtxmlUp4oBkjUcz770ZjyfLnhL8khDMX30gvCwpbgiuME22vpftT6F8it2_4-9lj0L4ijGlTVU_zPYIx5yXdbOf_Vr6bYjSGP1TRu0skrZDowejB22l36LPuZdb1Om-91LtENJsgw7I9SiuAR1KpY3ZBBQ2bdQmJTyMRqtZL4KflG780bsI2qJ0lBtGA9foSsf1jQrleSsD5KPUHp2DP81bbTttL1HQER5nD3ppAjzZ3Yvs49Gb8-VJvnp_fLo8WOWKYVLnbQsM06rANSuVApUsdC2VbdFixXghgTZ9p0gBqlUMaFdyzMqu7ztSNVABXWSvZ91x0w7QKbDRSyNGr4c0DOGkFn9nrF6LS_dDFEXBijTfRfZ8FnAhahFU6l2tlbMWVEwgyipak4R6sSvj3fcNhCgGHRQYIy24TRCkqVlR4wlIZqDyLgQP_W0rBItpB8Q_O5A4z-6-4Q9j9-kJ0MyAK21g-39FcfDlqDi8YKSaxPOZq0OE61uu9N9ExSln4uLdsTj7dELO-OqtIPQ3wuTRhA</recordid><startdate>200611</startdate><enddate>200611</enddate><creator>Vivian, J. P.</creator><creator>Porter, C.</creator><creator>Wilce, J. A.</creator><creator>Wilce, M. C. J.</creator><general>Blackwell Publishing Ltd</general><general>International Union of Crystallography</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>OTOTI</scope><scope>5PM</scope></search><sort><creationdate>200611</creationdate><title>Crystallization and preliminary X-ray diffraction analysis of the Bacillus subtilis replication termination protein in complex with the 37-base-pair TerI-binding site</title><author>Vivian, J. P. ; Porter, C. ; Wilce, J. A. ; Wilce, M. C. J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5018-bbe503620854ccec54cedb3ab2b0c572ae39fdc12ecbc5e3d47054dffd169e6e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Bacillus subtilis</topic><topic>Bacillus subtilis - chemistry</topic><topic>Bacillus subtilis - genetics</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - isolation & purification</topic><topic>Base Pairing</topic><topic>Binding Sites</topic><topic>CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY</topic><topic>CRYSTALLIZATION</topic><topic>Crystallization Communications</topic><topic>CRYSTALS</topic><topic>DNA</topic><topic>DNA, Bacterial - chemistry</topic><topic>DNA, Bacterial - genetics</topic><topic>DNA-Binding Proteins - chemistry</topic><topic>DNA-Binding Proteins - isolation & purification</topic><topic>Mutagenesis, Site-Directed</topic><topic>PROTEINS</topic><topic>Recombinant Proteins - chemistry</topic><topic>replication terminator proteins</topic><topic>RESOLUTION</topic><topic>SPACE GROUPS</topic><topic>SYNCHROTRON RADIATION</topic><topic>TerI</topic><topic>Terminator Regions, Genetic</topic><topic>X-RAY DIFFRACTION</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Vivian, J. P.</creatorcontrib><creatorcontrib>Porter, C.</creatorcontrib><creatorcontrib>Wilce, J. A.</creatorcontrib><creatorcontrib>Wilce, M. C. J.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>OSTI.GOV</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Acta crystallographica. Section F, Structural biology and crystallization communications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Vivian, J. P.</au><au>Porter, C.</au><au>Wilce, J. A.</au><au>Wilce, M. C. J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Crystallization and preliminary X-ray diffraction analysis of the Bacillus subtilis replication termination protein in complex with the 37-base-pair TerI-binding site</atitle><jtitle>Acta crystallographica. Section F, Structural biology and crystallization communications</jtitle><addtitle>Acta Cryst. F</addtitle><date>2006-11</date><risdate>2006</risdate><volume>62</volume><issue>11</issue><spage>1104</spage><epage>1107</epage><pages>1104-1107</pages><issn>1744-3091</issn><eissn>1744-3091</eissn><abstract>The replication terminator protein (RTP) of Bacillus subtilis binds to specific DNA sequences that halt the progression of the replisome in a polar manner. These terminator complexes flank a defined region of the chromosome into which they allow replication forks to enter but not exit. Forcing the fusion of replication forks in a specific zone is thought to allow the coordination of post‐replicative processes. The functional terminator complex comprises two homodimers each of 29 kDa bound to overlapping binding sites. A preparation of RTP and a 37‐base‐pair TerI sequence (comprising two binding sites for RTP) has been purified and crystallized. A data set to 3.9 Å resolution with 97.0% completeness and an Rsym of 12% was collected from a single flash‐cooled crystal using synchrotron radiation. The diffraction data are consistent with space group P622, with unit‐cell parameters a = b = 118.8, c = 142.6 Å.</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>Blackwell Publishing Ltd</pub><pmid>17077489</pmid><doi>10.1107/S1744309106039108</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Bacillus subtilis Bacillus subtilis - chemistry Bacillus subtilis - genetics Bacterial Proteins - chemistry Bacterial Proteins - isolation & purification Base Pairing Binding Sites CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY CRYSTALLIZATION Crystallization Communications CRYSTALS DNA DNA, Bacterial - chemistry DNA, Bacterial - genetics DNA-Binding Proteins - chemistry DNA-Binding Proteins - isolation & purification Mutagenesis, Site-Directed PROTEINS Recombinant Proteins - chemistry replication terminator proteins RESOLUTION SPACE GROUPS SYNCHROTRON RADIATION TerI Terminator Regions, Genetic X-RAY DIFFRACTION |
title | Crystallization and preliminary X-ray diffraction analysis of the Bacillus subtilis replication termination protein in complex with the 37-base-pair TerI-binding site |
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