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Diversity of aminopeptidases, derived from four lepidopteran gene duplications, and polycalins expressed in the midgut of Helicoverpa armigera: Identification of proteins binding the δ-endotoxin, Cry1Ac of Bacillus thuringiensis
Helicoverpa armigera midgut proteins that bind the Bacillus thuringiensis ( Bt) δ-endotoxin Cry1Ac were purified by affinity chromatography. SDS-PAGE showed that several proteins were eluted with N-acetylgalactosamine and no further proteins were detected after elution with urea. Tandem mass spectra...
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Published in: | Insect biochemistry and molecular biology 2008-07, Vol.38 (7), p.685-696 |
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creator | Angelucci, Constanza Barrett-Wilt, Gregory A. Hunt, Donald F. Akhurst, Raymond J. East, Peter D. Gordon, Karl H.J. Campbell, Peter M. |
description | Helicoverpa armigera midgut proteins that bind the
Bacillus thuringiensis (
Bt)
δ-endotoxin Cry1Ac were purified by affinity chromatography. SDS-PAGE showed that several proteins were eluted with
N-acetylgalactosamine and no further proteins were detected after elution with urea. Tandem mass spectral data for tryptic peptides initially indicated that the proteins resembled aminopeptidases (APNs) from other lepidopterans and cDNA sequences for seven APNs were isolated from
H. armigera through a combination of cloning with primers derived from predicted peptide sequences and established EST libraries. Phylogenetic analysis showed lepidopteran APN genes in nine clades of which five were part of a lepidopteran-specific radiation. The Cry1Ac-binding proteins were then identified with four of the seven
HaAPN genes. Three of those four APNs are likely orthologs of APNs characterised as Cry1Ac-binding proteins in other lepidopterans. The fourth Cry1Ac-binding APN has orthologs not previously identified as Cry1Ac-binding partners. The
HaAPN genes were expressed predominantly in the midgut through larval development. Each showed consistent expression along the length of the midgut but five of the genes were expressed at levels about two orders of magnitude greater than the remaining two. The remaining mass spectral data identified sequences encoding polycalin proteins with multiple lipocalin-like domains. A polycalin has only been previously reported in another lepidopteran,
Bombyx mori, but polycalins in both species are now linked with binding of
Bt Cry toxins. This is the first report of hybrid, lipocalin-like domains in shorter polycalin sequences that are not present in the longest sequence. We propose that these hybrid domains are generated by alternative splicing of the mRNA. |
doi_str_mv | 10.1016/j.ibmb.2008.03.010 |
format | article |
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Bacillus thuringiensis (
Bt)
δ-endotoxin Cry1Ac were purified by affinity chromatography. SDS-PAGE showed that several proteins were eluted with
N-acetylgalactosamine and no further proteins were detected after elution with urea. Tandem mass spectral data for tryptic peptides initially indicated that the proteins resembled aminopeptidases (APNs) from other lepidopterans and cDNA sequences for seven APNs were isolated from
H. armigera through a combination of cloning with primers derived from predicted peptide sequences and established EST libraries. Phylogenetic analysis showed lepidopteran APN genes in nine clades of which five were part of a lepidopteran-specific radiation. The Cry1Ac-binding proteins were then identified with four of the seven
HaAPN genes. Three of those four APNs are likely orthologs of APNs characterised as Cry1Ac-binding proteins in other lepidopterans. The fourth Cry1Ac-binding APN has orthologs not previously identified as Cry1Ac-binding partners. The
HaAPN genes were expressed predominantly in the midgut through larval development. Each showed consistent expression along the length of the midgut but five of the genes were expressed at levels about two orders of magnitude greater than the remaining two. The remaining mass spectral data identified sequences encoding polycalin proteins with multiple lipocalin-like domains. A polycalin has only been previously reported in another lepidopteran,
Bombyx mori, but polycalins in both species are now linked with binding of
Bt Cry toxins. This is the first report of hybrid, lipocalin-like domains in shorter polycalin sequences that are not present in the longest sequence. We propose that these hybrid domains are generated by alternative splicing of the mRNA.</description><identifier>ISSN: 0965-1748</identifier><identifier>EISSN: 1879-0240</identifier><identifier>DOI: 10.1016/j.ibmb.2008.03.010</identifier><identifier>PMID: 18549954</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Alternative splicing ; Amino Acid Sequence ; amino acid sequences ; Aminopeptidase N ; aminopeptidases ; Aminopeptidases - chemistry ; Aminopeptidases - genetics ; Aminopeptidases - isolation & purification ; Aminopeptidases - metabolism ; Animals ; Bacillus thuringiensis ; Bacterial Proteins - chemistry ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; bacterial toxins ; Binding site ; binding sites ; Bombyx mori ; Cry1Ac ; crystal proteins ; Digestive System - enzymology ; Endotoxins - chemistry ; Endotoxins - genetics ; Endotoxins - metabolism ; expressed sequence tags ; Gene Duplication ; Gene Expression ; genes ; Helicoverpa armigera ; Hemolysin Proteins - chemistry ; Hemolysin Proteins - genetics ; Hemolysin Proteins - metabolism ; Insect Proteins - chemistry ; Insect Proteins - genetics ; Insect Proteins - isolation & purification ; Insect Proteins - metabolism ; insecticidal proteins ; Lepidoptera ; Lepidoptera - chemistry ; Lepidoptera - classification ; Lepidoptera - enzymology ; Lepidoptera - genetics ; mass spectrometry ; messenger RNA ; midgut ; Molecular Sequence Data ; Moths - chemistry ; Moths - classification ; Moths - enzymology ; Moths - genetics ; peptides ; Phylogeny ; Polycalin ; polycalins ; Protein Binding ; Protein Structure, Tertiary ; Sequence Alignment</subject><ispartof>Insect biochemistry and molecular biology, 2008-07, Vol.38 (7), p.685-696</ispartof><rights>2008</rights><rights>2008 Published by Elsevier Ltd. 2008</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c508t-9058a62ecb3bdca4d0678f58f523d44550175fff48780f756da9da2d3d3f87d63</citedby><cites>FETCH-LOGICAL-c508t-9058a62ecb3bdca4d0678f58f523d44550175fff48780f756da9da2d3d3f87d63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18549954$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Angelucci, Constanza</creatorcontrib><creatorcontrib>Barrett-Wilt, Gregory A.</creatorcontrib><creatorcontrib>Hunt, Donald F.</creatorcontrib><creatorcontrib>Akhurst, Raymond J.</creatorcontrib><creatorcontrib>East, Peter D.</creatorcontrib><creatorcontrib>Gordon, Karl H.J.</creatorcontrib><creatorcontrib>Campbell, Peter M.</creatorcontrib><title>Diversity of aminopeptidases, derived from four lepidopteran gene duplications, and polycalins expressed in the midgut of Helicoverpa armigera: Identification of proteins binding the δ-endotoxin, Cry1Ac of Bacillus thuringiensis</title><title>Insect biochemistry and molecular biology</title><addtitle>Insect Biochem Mol Biol</addtitle><description>Helicoverpa armigera midgut proteins that bind the
Bacillus thuringiensis (
Bt)
δ-endotoxin Cry1Ac were purified by affinity chromatography. SDS-PAGE showed that several proteins were eluted with
N-acetylgalactosamine and no further proteins were detected after elution with urea. Tandem mass spectral data for tryptic peptides initially indicated that the proteins resembled aminopeptidases (APNs) from other lepidopterans and cDNA sequences for seven APNs were isolated from
H. armigera through a combination of cloning with primers derived from predicted peptide sequences and established EST libraries. Phylogenetic analysis showed lepidopteran APN genes in nine clades of which five were part of a lepidopteran-specific radiation. The Cry1Ac-binding proteins were then identified with four of the seven
HaAPN genes. Three of those four APNs are likely orthologs of APNs characterised as Cry1Ac-binding proteins in other lepidopterans. The fourth Cry1Ac-binding APN has orthologs not previously identified as Cry1Ac-binding partners. The
HaAPN genes were expressed predominantly in the midgut through larval development. Each showed consistent expression along the length of the midgut but five of the genes were expressed at levels about two orders of magnitude greater than the remaining two. The remaining mass spectral data identified sequences encoding polycalin proteins with multiple lipocalin-like domains. A polycalin has only been previously reported in another lepidopteran,
Bombyx mori, but polycalins in both species are now linked with binding of
Bt Cry toxins. This is the first report of hybrid, lipocalin-like domains in shorter polycalin sequences that are not present in the longest sequence. We propose that these hybrid domains are generated by alternative splicing of the mRNA.</description><subject>Alternative splicing</subject><subject>Amino Acid Sequence</subject><subject>amino acid sequences</subject><subject>Aminopeptidase N</subject><subject>aminopeptidases</subject><subject>Aminopeptidases - chemistry</subject><subject>Aminopeptidases - genetics</subject><subject>Aminopeptidases - isolation & purification</subject><subject>Aminopeptidases - metabolism</subject><subject>Animals</subject><subject>Bacillus thuringiensis</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>bacterial toxins</subject><subject>Binding site</subject><subject>binding sites</subject><subject>Bombyx mori</subject><subject>Cry1Ac</subject><subject>crystal proteins</subject><subject>Digestive System - enzymology</subject><subject>Endotoxins - chemistry</subject><subject>Endotoxins - genetics</subject><subject>Endotoxins - metabolism</subject><subject>expressed sequence tags</subject><subject>Gene Duplication</subject><subject>Gene Expression</subject><subject>genes</subject><subject>Helicoverpa armigera</subject><subject>Hemolysin Proteins - chemistry</subject><subject>Hemolysin Proteins - genetics</subject><subject>Hemolysin Proteins - metabolism</subject><subject>Insect Proteins - chemistry</subject><subject>Insect Proteins - genetics</subject><subject>Insect Proteins - isolation & purification</subject><subject>Insect Proteins - metabolism</subject><subject>insecticidal proteins</subject><subject>Lepidoptera</subject><subject>Lepidoptera - chemistry</subject><subject>Lepidoptera - classification</subject><subject>Lepidoptera - enzymology</subject><subject>Lepidoptera - genetics</subject><subject>mass spectrometry</subject><subject>messenger RNA</subject><subject>midgut</subject><subject>Molecular Sequence Data</subject><subject>Moths - chemistry</subject><subject>Moths - classification</subject><subject>Moths - enzymology</subject><subject>Moths - genetics</subject><subject>peptides</subject><subject>Phylogeny</subject><subject>Polycalin</subject><subject>polycalins</subject><subject>Protein Binding</subject><subject>Protein Structure, Tertiary</subject><subject>Sequence Alignment</subject><issn>0965-1748</issn><issn>1879-0240</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><recordid>eNp9kkuO1DAQhiMEYoaBC7AAr1hNmsqr4yCENDSPGWkkFjBry7HLmWoldrCT1vS9OAe34B44dIvHBsmSF_7qq3LpT5KnGawyyNYvtytqh3aVA_AVFCvI4F5ymvG6SSEv4X5yCs26SrO65CfJoxC2AFCWVf0wOcl4VTZNVZ4mP97RDn2gac-cYXIg60YcJ9IyYDhnGn1818x4NzDjZs96HEm7cUIvLevQItPz2JOSEzkbK6TVbHT9XsmebGB4N3oMISrIsukW2UC6m6el2SXGMhe7j5JJP1AXla_YlUY7kTkKF270bsLF1ZLVZLtfmu_fUrTaTe6O7Dnb-H12oRb4rVTU93OI0OwjTGgDhcfJAyP7gE-O91ly8-H9l81lev3p49Xm4jpVFfApbaDicp2jaotWK1lqWNfcVPHkhY6rqyCrK2NMyWsOpq7WWjZa5rrQheG1XhdnyZuDd5zbAbWKX_GyF6OnQfq9cJLEvy-WbkXndiLnVZ4XdRS8OAq8-zpjmMRAQWHfS4tuDiJrODSc8wjmB1B5F4JH87tJBmJJh9iKJR1iSYeAQsR0xKJnf4_3p-QYhwg8PwBGOiE7T0HcfM4hKwAa4E1ZReL1gcC4xh2hF0HFHSvU5FFNQjv63wQ_AWjV3ek</recordid><startdate>20080701</startdate><enddate>20080701</enddate><creator>Angelucci, Constanza</creator><creator>Barrett-Wilt, Gregory A.</creator><creator>Hunt, Donald F.</creator><creator>Akhurst, Raymond J.</creator><creator>East, Peter D.</creator><creator>Gordon, Karl H.J.</creator><creator>Campbell, Peter M.</creator><general>Elsevier Ltd</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7SS</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>20080701</creationdate><title>Diversity of aminopeptidases, derived from four lepidopteran gene duplications, and polycalins expressed in the midgut of Helicoverpa armigera: Identification of proteins binding the δ-endotoxin, Cry1Ac of Bacillus thuringiensis</title><author>Angelucci, Constanza ; Barrett-Wilt, Gregory A. ; Hunt, Donald F. ; Akhurst, Raymond J. ; East, Peter D. ; Gordon, Karl H.J. ; Campbell, Peter M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c508t-9058a62ecb3bdca4d0678f58f523d44550175fff48780f756da9da2d3d3f87d63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Alternative splicing</topic><topic>Amino Acid Sequence</topic><topic>amino acid sequences</topic><topic>Aminopeptidase N</topic><topic>aminopeptidases</topic><topic>Aminopeptidases - chemistry</topic><topic>Aminopeptidases - genetics</topic><topic>Aminopeptidases - isolation & purification</topic><topic>Aminopeptidases - metabolism</topic><topic>Animals</topic><topic>Bacillus thuringiensis</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>bacterial toxins</topic><topic>Binding site</topic><topic>binding sites</topic><topic>Bombyx mori</topic><topic>Cry1Ac</topic><topic>crystal proteins</topic><topic>Digestive System - enzymology</topic><topic>Endotoxins - chemistry</topic><topic>Endotoxins - genetics</topic><topic>Endotoxins - metabolism</topic><topic>expressed sequence tags</topic><topic>Gene Duplication</topic><topic>Gene Expression</topic><topic>genes</topic><topic>Helicoverpa armigera</topic><topic>Hemolysin Proteins - chemistry</topic><topic>Hemolysin Proteins - genetics</topic><topic>Hemolysin Proteins - metabolism</topic><topic>Insect Proteins - chemistry</topic><topic>Insect Proteins - genetics</topic><topic>Insect Proteins - isolation & purification</topic><topic>Insect Proteins - metabolism</topic><topic>insecticidal proteins</topic><topic>Lepidoptera</topic><topic>Lepidoptera - chemistry</topic><topic>Lepidoptera - classification</topic><topic>Lepidoptera - enzymology</topic><topic>Lepidoptera - genetics</topic><topic>mass spectrometry</topic><topic>messenger RNA</topic><topic>midgut</topic><topic>Molecular Sequence Data</topic><topic>Moths - chemistry</topic><topic>Moths - classification</topic><topic>Moths - enzymology</topic><topic>Moths - genetics</topic><topic>peptides</topic><topic>Phylogeny</topic><topic>Polycalin</topic><topic>polycalins</topic><topic>Protein Binding</topic><topic>Protein Structure, Tertiary</topic><topic>Sequence Alignment</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Angelucci, Constanza</creatorcontrib><creatorcontrib>Barrett-Wilt, Gregory A.</creatorcontrib><creatorcontrib>Hunt, Donald F.</creatorcontrib><creatorcontrib>Akhurst, Raymond J.</creatorcontrib><creatorcontrib>East, Peter D.</creatorcontrib><creatorcontrib>Gordon, Karl H.J.</creatorcontrib><creatorcontrib>Campbell, Peter M.</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Insect biochemistry and molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Angelucci, Constanza</au><au>Barrett-Wilt, Gregory A.</au><au>Hunt, Donald F.</au><au>Akhurst, Raymond J.</au><au>East, Peter D.</au><au>Gordon, Karl H.J.</au><au>Campbell, Peter M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Diversity of aminopeptidases, derived from four lepidopteran gene duplications, and polycalins expressed in the midgut of Helicoverpa armigera: Identification of proteins binding the δ-endotoxin, Cry1Ac of Bacillus thuringiensis</atitle><jtitle>Insect biochemistry and molecular biology</jtitle><addtitle>Insect Biochem Mol Biol</addtitle><date>2008-07-01</date><risdate>2008</risdate><volume>38</volume><issue>7</issue><spage>685</spage><epage>696</epage><pages>685-696</pages><issn>0965-1748</issn><eissn>1879-0240</eissn><abstract>Helicoverpa armigera midgut proteins that bind the
Bacillus thuringiensis (
Bt)
δ-endotoxin Cry1Ac were purified by affinity chromatography. SDS-PAGE showed that several proteins were eluted with
N-acetylgalactosamine and no further proteins were detected after elution with urea. Tandem mass spectral data for tryptic peptides initially indicated that the proteins resembled aminopeptidases (APNs) from other lepidopterans and cDNA sequences for seven APNs were isolated from
H. armigera through a combination of cloning with primers derived from predicted peptide sequences and established EST libraries. Phylogenetic analysis showed lepidopteran APN genes in nine clades of which five were part of a lepidopteran-specific radiation. The Cry1Ac-binding proteins were then identified with four of the seven
HaAPN genes. Three of those four APNs are likely orthologs of APNs characterised as Cry1Ac-binding proteins in other lepidopterans. The fourth Cry1Ac-binding APN has orthologs not previously identified as Cry1Ac-binding partners. The
HaAPN genes were expressed predominantly in the midgut through larval development. Each showed consistent expression along the length of the midgut but five of the genes were expressed at levels about two orders of magnitude greater than the remaining two. The remaining mass spectral data identified sequences encoding polycalin proteins with multiple lipocalin-like domains. A polycalin has only been previously reported in another lepidopteran,
Bombyx mori, but polycalins in both species are now linked with binding of
Bt Cry toxins. This is the first report of hybrid, lipocalin-like domains in shorter polycalin sequences that are not present in the longest sequence. We propose that these hybrid domains are generated by alternative splicing of the mRNA.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>18549954</pmid><doi>10.1016/j.ibmb.2008.03.010</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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source | ScienceDirect Freedom Collection |
subjects | Alternative splicing Amino Acid Sequence amino acid sequences Aminopeptidase N aminopeptidases Aminopeptidases - chemistry Aminopeptidases - genetics Aminopeptidases - isolation & purification Aminopeptidases - metabolism Animals Bacillus thuringiensis Bacterial Proteins - chemistry Bacterial Proteins - genetics Bacterial Proteins - metabolism bacterial toxins Binding site binding sites Bombyx mori Cry1Ac crystal proteins Digestive System - enzymology Endotoxins - chemistry Endotoxins - genetics Endotoxins - metabolism expressed sequence tags Gene Duplication Gene Expression genes Helicoverpa armigera Hemolysin Proteins - chemistry Hemolysin Proteins - genetics Hemolysin Proteins - metabolism Insect Proteins - chemistry Insect Proteins - genetics Insect Proteins - isolation & purification Insect Proteins - metabolism insecticidal proteins Lepidoptera Lepidoptera - chemistry Lepidoptera - classification Lepidoptera - enzymology Lepidoptera - genetics mass spectrometry messenger RNA midgut Molecular Sequence Data Moths - chemistry Moths - classification Moths - enzymology Moths - genetics peptides Phylogeny Polycalin polycalins Protein Binding Protein Structure, Tertiary Sequence Alignment |
title | Diversity of aminopeptidases, derived from four lepidopteran gene duplications, and polycalins expressed in the midgut of Helicoverpa armigera: Identification of proteins binding the δ-endotoxin, Cry1Ac of Bacillus thuringiensis |
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