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Interactions of Mitochondrial Presequence Peptides with the Mitochondrial Outer Membrane Preprotein Translocase TOM
TOM protein-conducting channels serve as the main entry sites into mitochondria for virtually all mitochondrial proteins. When incorporated into lipid bilayers, they form large, relatively nonspecific ion channels that are blocked by peptides derived from mitochondrial precursor proteins. Using sing...
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Published in: | Biophysical journal 2010-08, Vol.99 (3), p.774-781 |
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description | TOM protein-conducting channels serve as the main entry sites into mitochondria for virtually all mitochondrial proteins. When incorporated into lipid bilayers, they form large, relatively nonspecific ion channels that are blocked by peptides derived from mitochondrial precursor proteins. Using single-channel electrical recordings, we analyzed the interactions of mitochondrial presequence peptides with single TOM pores. The largest conductance state of the translocon represents the likely protein-conducting conformation of the channel. The frequency (but not the duration) of the polypeptide-induced blockage is strongly modulated by the substrate concentration. Structural differences between substrates are reflected in characteristic blockage frequencies and duration of blockage. To our knowledge, this study provides first quantitative data regarding the kinetics of polypeptide interaction with the mitochondrial TOM machinery. |
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When incorporated into lipid bilayers, they form large, relatively nonspecific ion channels that are blocked by peptides derived from mitochondrial precursor proteins. Using single-channel electrical recordings, we analyzed the interactions of mitochondrial presequence peptides with single TOM pores. The largest conductance state of the translocon represents the likely protein-conducting conformation of the channel. The frequency (but not the duration) of the polypeptide-induced blockage is strongly modulated by the substrate concentration. Structural differences between substrates are reflected in characteristic blockage frequencies and duration of blockage. To our knowledge, this study provides first quantitative data regarding the kinetics of polypeptide interaction with the mitochondrial TOM machinery.</description><identifier>ISSN: 0006-3495</identifier><identifier>EISSN: 1542-0086</identifier><identifier>DOI: 10.1016/j.bpj.2010.05.010</identifier><identifier>PMID: 20682254</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Amino Acid Sequence ; Biochemistry ; Biophysics ; Blockage ; Carrier Proteins - metabolism ; Channels ; Channels and Transporters ; Ion Channel Gating ; Ion channels ; Ion Channels - metabolism ; Kinetics ; Lipids ; Membrane Potentials - physiology ; Membranes ; Mitochondria ; Mitochondria - enzymology ; Mitochondria - ultrastructure ; Mitochondrial Membranes - enzymology ; Mitochondrial Membranes - metabolism ; Mitochondrial Membranes - ultrastructure ; Mitochondrial Proteins - metabolism ; Models, Biological ; Molecular Sequence Data ; Neurospora crassa - metabolism ; Neurospora crassa - ultrastructure ; Peptides ; Peptides - chemistry ; Peptides - metabolism ; Precursors ; Protein Binding ; Protein Precursors - metabolism ; Protein Sorting Signals ; Proteins ; Recording ; Substrate Specificity ; Time Factors</subject><ispartof>Biophysical journal, 2010-08, Vol.99 (3), p.774-781</ispartof><rights>2010 Biophysical Society</rights><rights>2010 Biophysical Society. 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All rights reserved.</rights><rights>Copyright Biophysical Society Aug 4, 2010</rights><rights>2010 by the Biophysical Society. 2010 Biophysical Society</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c510t-1f8f123291f815c0cc719dd7692fea52cc104fcf7a6a8c10b674e5408344aac43</citedby><cites>FETCH-LOGICAL-c510t-1f8f123291f815c0cc719dd7692fea52cc104fcf7a6a8c10b674e5408344aac43</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2913200/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2913200/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20682254$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Romero-Ruiz, Mercedes</creatorcontrib><creatorcontrib>Mahendran, Kozhinjampara R.</creatorcontrib><creatorcontrib>Eckert, Reiner</creatorcontrib><creatorcontrib>Winterhalter, Mathias</creatorcontrib><creatorcontrib>Nussberger, Stephan</creatorcontrib><title>Interactions of Mitochondrial Presequence Peptides with the Mitochondrial Outer Membrane Preprotein Translocase TOM</title><title>Biophysical journal</title><addtitle>Biophys J</addtitle><description>TOM protein-conducting channels serve as the main entry sites into mitochondria for virtually all mitochondrial proteins. 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To our knowledge, this study provides first quantitative data regarding the kinetics of polypeptide interaction with the mitochondrial TOM machinery.</description><subject>Amino Acid Sequence</subject><subject>Biochemistry</subject><subject>Biophysics</subject><subject>Blockage</subject><subject>Carrier Proteins - metabolism</subject><subject>Channels</subject><subject>Channels and Transporters</subject><subject>Ion Channel Gating</subject><subject>Ion channels</subject><subject>Ion Channels - metabolism</subject><subject>Kinetics</subject><subject>Lipids</subject><subject>Membrane Potentials - physiology</subject><subject>Membranes</subject><subject>Mitochondria</subject><subject>Mitochondria - enzymology</subject><subject>Mitochondria - ultrastructure</subject><subject>Mitochondrial Membranes - enzymology</subject><subject>Mitochondrial Membranes - metabolism</subject><subject>Mitochondrial Membranes - ultrastructure</subject><subject>Mitochondrial Proteins - metabolism</subject><subject>Models, Biological</subject><subject>Molecular Sequence Data</subject><subject>Neurospora crassa - metabolism</subject><subject>Neurospora crassa - ultrastructure</subject><subject>Peptides</subject><subject>Peptides - chemistry</subject><subject>Peptides - metabolism</subject><subject>Precursors</subject><subject>Protein Binding</subject><subject>Protein Precursors - metabolism</subject><subject>Protein Sorting Signals</subject><subject>Proteins</subject><subject>Recording</subject><subject>Substrate Specificity</subject><subject>Time Factors</subject><issn>0006-3495</issn><issn>1542-0086</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><recordid>eNp9kU1v1DAQhiMEokvhB3BBERe4ZBk7tpMIqRKq-KjU1fawnC2vM2EdZeNgO0X8eybaUkEPPc3Yfub1zLxZ9prBmgFTH_r1furXHOgMck3hSbZiUvACoFZPsxUAqKIUjTzLXsTYAzAugT3PzjiomnMpVlm8GhMGY5PzY8x9l29c8vbgxzY4M-Q3ASP-nHG0mN_glFyLMf_l0iFPB3zAbmdSyjd43Acz4lI6BZ_QjfmOLuLgrYmY77abl9mzzgwRX93F8-z7l8-7y2_F9fbr1eWn68JKBqlgXd0xXvKGEiYtWFuxpm0r1fAOjeTWMhCd7SqjTE35XlUCpYC6FMIYK8rz7OKkO837I7YWxxTMoKfgjib81t44_f_L6A76h7_V9GXJAUjg3Z1A8LSEmPTRRYvDQPP5OepK1E3ZqKok8v2jJFMVk6CaZunq7QO093MYaRGkJ7gkhxRB7ATZ4GMM2N13zUAv3utek_d68V6D1BSo5s2_495X_DWbgI8nAGnptw6DjtYt1rYuoE269e4R-T8ylMD-</recordid><startdate>20100804</startdate><enddate>20100804</enddate><creator>Romero-Ruiz, Mercedes</creator><creator>Mahendran, Kozhinjampara R.</creator><creator>Eckert, Reiner</creator><creator>Winterhalter, Mathias</creator><creator>Nussberger, Stephan</creator><general>Elsevier Inc</general><general>Biophysical Society</general><general>The Biophysical Society</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7QP</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>7TB</scope><scope>7U5</scope><scope>L7M</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20100804</creationdate><title>Interactions of Mitochondrial Presequence Peptides with the Mitochondrial Outer Membrane Preprotein Translocase TOM</title><author>Romero-Ruiz, Mercedes ; Mahendran, Kozhinjampara R. ; Eckert, Reiner ; Winterhalter, Mathias ; Nussberger, Stephan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c510t-1f8f123291f815c0cc719dd7692fea52cc104fcf7a6a8c10b674e5408344aac43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Amino Acid Sequence</topic><topic>Biochemistry</topic><topic>Biophysics</topic><topic>Blockage</topic><topic>Carrier Proteins - metabolism</topic><topic>Channels</topic><topic>Channels and Transporters</topic><topic>Ion Channel Gating</topic><topic>Ion channels</topic><topic>Ion Channels - metabolism</topic><topic>Kinetics</topic><topic>Lipids</topic><topic>Membrane Potentials - physiology</topic><topic>Membranes</topic><topic>Mitochondria</topic><topic>Mitochondria - enzymology</topic><topic>Mitochondria - ultrastructure</topic><topic>Mitochondrial Membranes - enzymology</topic><topic>Mitochondrial Membranes - metabolism</topic><topic>Mitochondrial Membranes - ultrastructure</topic><topic>Mitochondrial Proteins - metabolism</topic><topic>Models, Biological</topic><topic>Molecular Sequence Data</topic><topic>Neurospora crassa - metabolism</topic><topic>Neurospora crassa - ultrastructure</topic><topic>Peptides</topic><topic>Peptides - chemistry</topic><topic>Peptides - metabolism</topic><topic>Precursors</topic><topic>Protein Binding</topic><topic>Protein Precursors - metabolism</topic><topic>Protein Sorting Signals</topic><topic>Proteins</topic><topic>Recording</topic><topic>Substrate Specificity</topic><topic>Time Factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Romero-Ruiz, Mercedes</creatorcontrib><creatorcontrib>Mahendran, Kozhinjampara R.</creatorcontrib><creatorcontrib>Eckert, Reiner</creatorcontrib><creatorcontrib>Winterhalter, Mathias</creatorcontrib><creatorcontrib>Nussberger, Stephan</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Biophysical journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Romero-Ruiz, Mercedes</au><au>Mahendran, Kozhinjampara R.</au><au>Eckert, Reiner</au><au>Winterhalter, Mathias</au><au>Nussberger, Stephan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Interactions of Mitochondrial Presequence Peptides with the Mitochondrial Outer Membrane Preprotein Translocase TOM</atitle><jtitle>Biophysical journal</jtitle><addtitle>Biophys J</addtitle><date>2010-08-04</date><risdate>2010</risdate><volume>99</volume><issue>3</issue><spage>774</spage><epage>781</epage><pages>774-781</pages><issn>0006-3495</issn><eissn>1542-0086</eissn><abstract>TOM protein-conducting channels serve as the main entry sites into mitochondria for virtually all mitochondrial proteins. When incorporated into lipid bilayers, they form large, relatively nonspecific ion channels that are blocked by peptides derived from mitochondrial precursor proteins. Using single-channel electrical recordings, we analyzed the interactions of mitochondrial presequence peptides with single TOM pores. The largest conductance state of the translocon represents the likely protein-conducting conformation of the channel. The frequency (but not the duration) of the polypeptide-induced blockage is strongly modulated by the substrate concentration. Structural differences between substrates are reflected in characteristic blockage frequencies and duration of blockage. To our knowledge, this study provides first quantitative data regarding the kinetics of polypeptide interaction with the mitochondrial TOM machinery.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>20682254</pmid><doi>10.1016/j.bpj.2010.05.010</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Biochemistry Biophysics Blockage Carrier Proteins - metabolism Channels Channels and Transporters Ion Channel Gating Ion channels Ion Channels - metabolism Kinetics Lipids Membrane Potentials - physiology Membranes Mitochondria Mitochondria - enzymology Mitochondria - ultrastructure Mitochondrial Membranes - enzymology Mitochondrial Membranes - metabolism Mitochondrial Membranes - ultrastructure Mitochondrial Proteins - metabolism Models, Biological Molecular Sequence Data Neurospora crassa - metabolism Neurospora crassa - ultrastructure Peptides Peptides - chemistry Peptides - metabolism Precursors Protein Binding Protein Precursors - metabolism Protein Sorting Signals Proteins Recording Substrate Specificity Time Factors |
title | Interactions of Mitochondrial Presequence Peptides with the Mitochondrial Outer Membrane Preprotein Translocase TOM |
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