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Delineation of the Xrcc4-interacting Region in the Globular Head Domain of Cernunnos/XLF
In mammals, the majority of DNA double-strand breaks are processed by the nonhomologous end-joining (NHEJ) pathway, composed of seven factors: Ku70, Ku80, DNA-PKcs, Artemis, Xrcc4 (X4), DNA-ligase IV (L4), and Cernunnos/XLF. Cernunnos is part of the ligation complex, constituted by X4 and L4. To imp...
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Published in: | The Journal of biological chemistry 2010-08, Vol.285 (34), p.26475-26483 |
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creator | Malivert, Laurent Ropars, Virginie Nunez, Marcela Drevet, Pascal Miron, Simona Faure, Guilhem Guerois, Raphael Mornon, Jean-Paul Revy, Patrick Charbonnier, Jean-Baptiste Callebaut, Isabelle de Villartay, Jean-Pierre |
description | In mammals, the majority of DNA double-strand breaks are processed by the nonhomologous end-joining (NHEJ) pathway, composed of seven factors: Ku70, Ku80, DNA-PKcs, Artemis, Xrcc4 (X4), DNA-ligase IV (L4), and Cernunnos/XLF. Cernunnos is part of the ligation complex, constituted by X4 and L4. To improve our knowledge on the structure and function of Cernunnos, we performed a systematic mutagenesis study on positions selected from an analysis of the recent three-dimensional structures of this factor. Ten of 27 screened mutants were nonfunctional in several DNA repair assays. Outside amino acids critical for the expression and stability of Cernunnos, we identified three amino acids (Arg64, Leu65, and Leu115) essential for the interaction with X4 and the proper function of Cernunnos. Docking the crystal structures of the two factors further validated this probable interaction surface of Cernunnos with X4. |
doi_str_mv | 10.1074/jbc.M110.138156 |
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Cernunnos is part of the ligation complex, constituted by X4 and L4. To improve our knowledge on the structure and function of Cernunnos, we performed a systematic mutagenesis study on positions selected from an analysis of the recent three-dimensional structures of this factor. Ten of 27 screened mutants were nonfunctional in several DNA repair assays. Outside amino acids critical for the expression and stability of Cernunnos, we identified three amino acids (Arg64, Leu65, and Leu115) essential for the interaction with X4 and the proper function of Cernunnos. Docking the crystal structures of the two factors further validated this probable interaction surface of Cernunnos with X4.</description><identifier>ISSN: 0021-9258</identifier><identifier>EISSN: 1083-351X</identifier><identifier>DOI: 10.1074/jbc.M110.138156</identifier><identifier>PMID: 20558749</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Amino Acids ; Binding Sites ; Biochemistry, Molecular Biology ; Cernunnos ; Computer Simulation ; Crystallography, X-Ray ; DNA and Chromosomes ; DNA Repair ; DNA Repair Enzymes - chemistry ; DNA Repair Enzymes - genetics ; DNA Repair Enzymes - metabolism ; DNA-Binding Proteins - chemistry ; DNA-Binding Proteins - genetics ; DNA-Binding Proteins - metabolism ; Humans ; Life Sciences ; Mutagenesis, Site-Directed ; NHEJ ; Protein Binding ; Protein Conformation ; Protein Domains ; Protein Folding ; Protein Structure ; Protein Structure and Folding ; Protein Structure, Tertiary ; XLF ; Xrcc4</subject><ispartof>The Journal of biological chemistry, 2010-08, Vol.285 (34), p.26475-26483</ispartof><rights>2010 © 2010 ASBMB. Currently published by Elsevier Inc; originally published by American Society for Biochemistry and Molecular Biology.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>2010 by The American Society for Biochemistry and Molecular Biology, Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c566t-7fef99a50e7473b8311224085c5403640f823a38203910a2094d4f18a9090c153</citedby><cites>FETCH-LOGICAL-c566t-7fef99a50e7473b8311224085c5403640f823a38203910a2094d4f18a9090c153</cites><orcidid>0000-0001-5987-0463 ; 0000-0003-3124-887X ; 0000-0002-5219-1983 ; 0000-0003-0758-8022 ; 0000-0002-3372-6030</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2924081/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0021925820596129$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,3547,27922,27923,45778,53789,53791</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20558749$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-00493716$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Malivert, Laurent</creatorcontrib><creatorcontrib>Ropars, Virginie</creatorcontrib><creatorcontrib>Nunez, Marcela</creatorcontrib><creatorcontrib>Drevet, Pascal</creatorcontrib><creatorcontrib>Miron, Simona</creatorcontrib><creatorcontrib>Faure, Guilhem</creatorcontrib><creatorcontrib>Guerois, Raphael</creatorcontrib><creatorcontrib>Mornon, Jean-Paul</creatorcontrib><creatorcontrib>Revy, Patrick</creatorcontrib><creatorcontrib>Charbonnier, Jean-Baptiste</creatorcontrib><creatorcontrib>Callebaut, Isabelle</creatorcontrib><creatorcontrib>de Villartay, Jean-Pierre</creatorcontrib><title>Delineation of the Xrcc4-interacting Region in the Globular Head Domain of Cernunnos/XLF</title><title>The Journal of biological chemistry</title><addtitle>J Biol Chem</addtitle><description>In mammals, the majority of DNA double-strand breaks are processed by the nonhomologous end-joining (NHEJ) pathway, composed of seven factors: Ku70, Ku80, DNA-PKcs, Artemis, Xrcc4 (X4), DNA-ligase IV (L4), and Cernunnos/XLF. Cernunnos is part of the ligation complex, constituted by X4 and L4. To improve our knowledge on the structure and function of Cernunnos, we performed a systematic mutagenesis study on positions selected from an analysis of the recent three-dimensional structures of this factor. Ten of 27 screened mutants were nonfunctional in several DNA repair assays. Outside amino acids critical for the expression and stability of Cernunnos, we identified three amino acids (Arg64, Leu65, and Leu115) essential for the interaction with X4 and the proper function of Cernunnos. Docking the crystal structures of the two factors further validated this probable interaction surface of Cernunnos with X4.</description><subject>Amino Acids</subject><subject>Binding Sites</subject><subject>Biochemistry, Molecular Biology</subject><subject>Cernunnos</subject><subject>Computer Simulation</subject><subject>Crystallography, X-Ray</subject><subject>DNA and Chromosomes</subject><subject>DNA Repair</subject><subject>DNA Repair Enzymes - chemistry</subject><subject>DNA Repair Enzymes - genetics</subject><subject>DNA Repair Enzymes - metabolism</subject><subject>DNA-Binding Proteins - chemistry</subject><subject>DNA-Binding Proteins - genetics</subject><subject>DNA-Binding Proteins - metabolism</subject><subject>Humans</subject><subject>Life Sciences</subject><subject>Mutagenesis, Site-Directed</subject><subject>NHEJ</subject><subject>Protein Binding</subject><subject>Protein Conformation</subject><subject>Protein Domains</subject><subject>Protein Folding</subject><subject>Protein Structure</subject><subject>Protein Structure and Folding</subject><subject>Protein Structure, Tertiary</subject><subject>XLF</subject><subject>Xrcc4</subject><issn>0021-9258</issn><issn>1083-351X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><recordid>eNp1kc1vEzEQxS0EoqFw5gZ77WGbGX_s2hekKqUNUhASUCk3y_HOJq4Su_JuIvHfs9uFCpDwxfLM772x5jH2FuESoZbz-42__IzjS2hU1TM2Q9CiFArXz9kMgGNpuNJn7FXX3cNwpMGX7IyDUrqWZsbW17QPkVwfUixSW_Q7KtbZe1mG2FN2vg9xW3yl7dgP8bF_u0-b497lYkmuKa7TwYVH7YJyPMaYuvl6dfOavWjdvqM3v-5zdnfz8ftiWa6-3H5aXK1Kr6qqL-uWWmOcAqplLTZaIHIuQSuvJIhKQqu5cEJzEAbBcTCykS1qZ8CARyXO2YfJ9-G4OVDjKfbZ7e1DDgeXf9jkgv27E8PObtPJcjPOwcHgYjLY_SNbXq3sWBuXJmqsTiM7n1ifU9dlap8ECHYMxA6B2DEQOwUyKN79-b0n_ncCA_B-AlqXrNvm0Nm7bxxQAOq6VkoOhJkIGtZ4CpRt5wNFT03I5HvbpPDf8T8BEE-hNg</recordid><startdate>20100820</startdate><enddate>20100820</enddate><creator>Malivert, Laurent</creator><creator>Ropars, Virginie</creator><creator>Nunez, Marcela</creator><creator>Drevet, Pascal</creator><creator>Miron, Simona</creator><creator>Faure, Guilhem</creator><creator>Guerois, Raphael</creator><creator>Mornon, Jean-Paul</creator><creator>Revy, Patrick</creator><creator>Charbonnier, Jean-Baptiste</creator><creator>Callebaut, Isabelle</creator><creator>de Villartay, Jean-Pierre</creator><general>Elsevier Inc</general><general>American Society for Biochemistry and Molecular Biology</general><scope>6I.</scope><scope>AAFTH</scope><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>1XC</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-5987-0463</orcidid><orcidid>https://orcid.org/0000-0003-3124-887X</orcidid><orcidid>https://orcid.org/0000-0002-5219-1983</orcidid><orcidid>https://orcid.org/0000-0003-0758-8022</orcidid><orcidid>https://orcid.org/0000-0002-3372-6030</orcidid></search><sort><creationdate>20100820</creationdate><title>Delineation of the Xrcc4-interacting Region in the Globular Head Domain of Cernunnos/XLF</title><author>Malivert, Laurent ; Ropars, Virginie ; Nunez, Marcela ; Drevet, Pascal ; Miron, Simona ; Faure, Guilhem ; Guerois, Raphael ; Mornon, Jean-Paul ; Revy, Patrick ; Charbonnier, Jean-Baptiste ; Callebaut, Isabelle ; de Villartay, Jean-Pierre</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c566t-7fef99a50e7473b8311224085c5403640f823a38203910a2094d4f18a9090c153</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Amino Acids</topic><topic>Binding Sites</topic><topic>Biochemistry, Molecular Biology</topic><topic>Cernunnos</topic><topic>Computer Simulation</topic><topic>Crystallography, X-Ray</topic><topic>DNA and Chromosomes</topic><topic>DNA Repair</topic><topic>DNA Repair Enzymes - chemistry</topic><topic>DNA Repair Enzymes - genetics</topic><topic>DNA Repair Enzymes - metabolism</topic><topic>DNA-Binding Proteins - chemistry</topic><topic>DNA-Binding Proteins - genetics</topic><topic>DNA-Binding Proteins - metabolism</topic><topic>Humans</topic><topic>Life Sciences</topic><topic>Mutagenesis, Site-Directed</topic><topic>NHEJ</topic><topic>Protein Binding</topic><topic>Protein Conformation</topic><topic>Protein Domains</topic><topic>Protein Folding</topic><topic>Protein Structure</topic><topic>Protein Structure and Folding</topic><topic>Protein Structure, Tertiary</topic><topic>XLF</topic><topic>Xrcc4</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Malivert, Laurent</creatorcontrib><creatorcontrib>Ropars, Virginie</creatorcontrib><creatorcontrib>Nunez, Marcela</creatorcontrib><creatorcontrib>Drevet, Pascal</creatorcontrib><creatorcontrib>Miron, Simona</creatorcontrib><creatorcontrib>Faure, Guilhem</creatorcontrib><creatorcontrib>Guerois, Raphael</creatorcontrib><creatorcontrib>Mornon, Jean-Paul</creatorcontrib><creatorcontrib>Revy, Patrick</creatorcontrib><creatorcontrib>Charbonnier, Jean-Baptiste</creatorcontrib><creatorcontrib>Callebaut, Isabelle</creatorcontrib><creatorcontrib>de Villartay, Jean-Pierre</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The Journal of biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Malivert, Laurent</au><au>Ropars, Virginie</au><au>Nunez, Marcela</au><au>Drevet, Pascal</au><au>Miron, Simona</au><au>Faure, Guilhem</au><au>Guerois, Raphael</au><au>Mornon, Jean-Paul</au><au>Revy, Patrick</au><au>Charbonnier, Jean-Baptiste</au><au>Callebaut, Isabelle</au><au>de Villartay, Jean-Pierre</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Delineation of the Xrcc4-interacting Region in the Globular Head Domain of Cernunnos/XLF</atitle><jtitle>The Journal of biological chemistry</jtitle><addtitle>J Biol Chem</addtitle><date>2010-08-20</date><risdate>2010</risdate><volume>285</volume><issue>34</issue><spage>26475</spage><epage>26483</epage><pages>26475-26483</pages><issn>0021-9258</issn><eissn>1083-351X</eissn><abstract>In mammals, the majority of DNA double-strand breaks are processed by the nonhomologous end-joining (NHEJ) pathway, composed of seven factors: Ku70, Ku80, DNA-PKcs, Artemis, Xrcc4 (X4), DNA-ligase IV (L4), and Cernunnos/XLF. Cernunnos is part of the ligation complex, constituted by X4 and L4. To improve our knowledge on the structure and function of Cernunnos, we performed a systematic mutagenesis study on positions selected from an analysis of the recent three-dimensional structures of this factor. Ten of 27 screened mutants were nonfunctional in several DNA repair assays. Outside amino acids critical for the expression and stability of Cernunnos, we identified three amino acids (Arg64, Leu65, and Leu115) essential for the interaction with X4 and the proper function of Cernunnos. 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subjects | Amino Acids Binding Sites Biochemistry, Molecular Biology Cernunnos Computer Simulation Crystallography, X-Ray DNA and Chromosomes DNA Repair DNA Repair Enzymes - chemistry DNA Repair Enzymes - genetics DNA Repair Enzymes - metabolism DNA-Binding Proteins - chemistry DNA-Binding Proteins - genetics DNA-Binding Proteins - metabolism Humans Life Sciences Mutagenesis, Site-Directed NHEJ Protein Binding Protein Conformation Protein Domains Protein Folding Protein Structure Protein Structure and Folding Protein Structure, Tertiary XLF Xrcc4 |
title | Delineation of the Xrcc4-interacting Region in the Globular Head Domain of Cernunnos/XLF |
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