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Intracellular localization of membrane-bound ATPases in the compartmentalized anammox bacterium 'Candidatus Kuenenia stuttgartiensis'
Anaerobic ammonium-oxidizing (anammox) bacteria are divided into three compartments by bilayer membranes (from out- to inside): paryphoplasm, riboplasm and anammoxosome. It is proposed that the anammox reaction is performed by proteins located in the anammoxosome and on its membrane giving rise to a...
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Published in: | Molecular microbiology 2010-08, Vol.77 (3), p.701-715 |
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creator | van Niftrik, Laura van Helden, Mary Kirchen, Silke van Donselaar, Elly G Harhangi, Harry R Webb, Richard I Fuerst, John A Op den Camp, Huub J.M Jetten, Mike S.M Strous, Marc |
description | Anaerobic ammonium-oxidizing (anammox) bacteria are divided into three compartments by bilayer membranes (from out- to inside): paryphoplasm, riboplasm and anammoxosome. It is proposed that the anammox reaction is performed by proteins located in the anammoxosome and on its membrane giving rise to a proton-motive-force and subsequent ATP synthesis by membrane-bound ATPases. To test this hypothesis, we investigated the location of membrane-bound ATPases in the anammox bacterium 'Candidatus Kuenenia stuttgartiensis'. Four ATPase gene clusters were identified in the K. stuttgartiensis genome: one typical F-ATPase, two atypical F-ATPases and a prokaryotic V-ATPase. K. stuttgartiensis transcriptomic and proteomic analysis and immunoblotting using antisera directed at catalytic subunits of the ATPase gene clusters indicated that only the typical F-ATPase gene cluster most likely encoded a functional ATPase under these cultivation conditions. Immunogold localization showed that the typical F-ATPase was predominantly located on both the outermost and anammoxosome membrane and to a lesser extent on the middle membrane. This is consistent with the anammox physiology model, and confirms the status of the outermost cell membrane as cytoplasmic membrane. The occurrence of ATPase in the anammoxosome membrane suggests that anammox bacteria have evolved a prokaryotic organelle; a membrane-bounded compartment with a specific cellular function: energy metabolism. |
doi_str_mv | 10.1111/j.1365-2958.2010.07242.x |
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It is proposed that the anammox reaction is performed by proteins located in the anammoxosome and on its membrane giving rise to a proton-motive-force and subsequent ATP synthesis by membrane-bound ATPases. To test this hypothesis, we investigated the location of membrane-bound ATPases in the anammox bacterium 'Candidatus Kuenenia stuttgartiensis'. Four ATPase gene clusters were identified in the K. stuttgartiensis genome: one typical F-ATPase, two atypical F-ATPases and a prokaryotic V-ATPase. K. stuttgartiensis transcriptomic and proteomic analysis and immunoblotting using antisera directed at catalytic subunits of the ATPase gene clusters indicated that only the typical F-ATPase gene cluster most likely encoded a functional ATPase under these cultivation conditions. Immunogold localization showed that the typical F-ATPase was predominantly located on both the outermost and anammoxosome membrane and to a lesser extent on the middle membrane. This is consistent with the anammox physiology model, and confirms the status of the outermost cell membrane as cytoplasmic membrane. The occurrence of ATPase in the anammoxosome membrane suggests that anammox bacteria have evolved a prokaryotic organelle; a membrane-bounded compartment with a specific cellular function: energy metabolism.</description><identifier>ISSN: 0950-382X</identifier><identifier>EISSN: 1365-2958</identifier><identifier>DOI: 10.1111/j.1365-2958.2010.07242.x</identifier><identifier>PMID: 20545867</identifier><language>eng</language><publisher>Oxford, UK: Oxford, UK : Blackwell Publishing Ltd</publisher><subject>Adenosine triphosphatase ; Adenosine Triphosphatases - genetics ; Adenosine Triphosphatases - metabolism ; Ammonia ; Anaerobiosis ; Bacteria - enzymology ; Bacteria - genetics ; Bacteria - metabolism ; Bacterial proteins ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; Biological and medical sciences ; Cell Membrane - enzymology ; Cell Membrane - genetics ; Cell Membrane - metabolism ; Fundamental and applied biological sciences. 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Aug 2010</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5542-398ec95fa0d233ca891d4ce09dc9b1204694ce99143dcfeee9b6c78a5fe8178a3</citedby><cites>FETCH-LOGICAL-c5542-398ec95fa0d233ca891d4ce09dc9b1204694ce99143dcfeee9b6c78a5fe8178a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,778,782,883,27911,27912</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=23051002$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20545867$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>van Niftrik, Laura</creatorcontrib><creatorcontrib>van Helden, Mary</creatorcontrib><creatorcontrib>Kirchen, Silke</creatorcontrib><creatorcontrib>van Donselaar, Elly G</creatorcontrib><creatorcontrib>Harhangi, Harry R</creatorcontrib><creatorcontrib>Webb, Richard I</creatorcontrib><creatorcontrib>Fuerst, John A</creatorcontrib><creatorcontrib>Op den Camp, Huub J.M</creatorcontrib><creatorcontrib>Jetten, Mike S.M</creatorcontrib><creatorcontrib>Strous, Marc</creatorcontrib><title>Intracellular localization of membrane-bound ATPases in the compartmentalized anammox bacterium 'Candidatus Kuenenia stuttgartiensis'</title><title>Molecular microbiology</title><addtitle>Mol Microbiol</addtitle><description>Anaerobic ammonium-oxidizing (anammox) bacteria are divided into three compartments by bilayer membranes (from out- to inside): paryphoplasm, riboplasm and anammoxosome. It is proposed that the anammox reaction is performed by proteins located in the anammoxosome and on its membrane giving rise to a proton-motive-force and subsequent ATP synthesis by membrane-bound ATPases. To test this hypothesis, we investigated the location of membrane-bound ATPases in the anammox bacterium 'Candidatus Kuenenia stuttgartiensis'. Four ATPase gene clusters were identified in the K. stuttgartiensis genome: one typical F-ATPase, two atypical F-ATPases and a prokaryotic V-ATPase. K. stuttgartiensis transcriptomic and proteomic analysis and immunoblotting using antisera directed at catalytic subunits of the ATPase gene clusters indicated that only the typical F-ATPase gene cluster most likely encoded a functional ATPase under these cultivation conditions. Immunogold localization showed that the typical F-ATPase was predominantly located on both the outermost and anammoxosome membrane and to a lesser extent on the middle membrane. This is consistent with the anammox physiology model, and confirms the status of the outermost cell membrane as cytoplasmic membrane. The occurrence of ATPase in the anammoxosome membrane suggests that anammox bacteria have evolved a prokaryotic organelle; a membrane-bounded compartment with a specific cellular function: energy metabolism.</description><subject>Adenosine triphosphatase</subject><subject>Adenosine Triphosphatases - genetics</subject><subject>Adenosine Triphosphatases - metabolism</subject><subject>Ammonia</subject><subject>Anaerobiosis</subject><subject>Bacteria - enzymology</subject><subject>Bacteria - genetics</subject><subject>Bacteria - metabolism</subject><subject>Bacterial proteins</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>Biological and medical sciences</subject><subject>Cell Membrane - enzymology</subject><subject>Cell Membrane - genetics</subject><subject>Cell Membrane - metabolism</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes</subject><subject>Genomics</subject><subject>Membranes</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Physiology</subject><subject>Protein Transport</subject><subject>Quaternary Ammonium Compounds - metabolism</subject><issn>0950-382X</issn><issn>1365-2958</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><recordid>eNqNksmOEzEQhlsIxITAK4CFhHLq4KUX-wDSKGKJmBFIzEjcLLe7OuOo2w62GzLceW_cJITlhC9e6vvLrvqdZYjgJUnj-XZJWFXmVJR8SXE6xTUt6HJ_J5udAnezGRYlzhmnn86yByFsMSYMV-x-dkZxWZS8qmfZ97WNXmno-7FXHvVOq958U9E4i1yHBhgaryzkjRtti86vPqgAARmL4g0g7Yad8nEAGycVtEhZNQxujxqlI3gzDmixUrY1rYpjQO9GsGCNQiGOMW6S1IANJiweZvc61Qd4dJzn2fXrV1ert_nF-zfr1flFrsuyoDkTHLQoO4VbyphWXJC20IBFq0VDKC4qkbZCkIK1ugMA0VS65qrsgJM0s3n28pB3NzYDtBqm4nu582ZQ_lY6ZeTfEWtu5MZ9kVSwiqS082xxTODd5xFClIMJU_dSj9wYZM0KjDkVdSKf_kNu3ehtqm6CSi4KxhPED5D2LgQP3ekpBMvJabmVk6FyMlROTsufTst9kj7-s5ST8Je1CXh2BFRIpnbJRm3Cb47hkmBME_fiwH01Pdz-9wPk5eV6WiX9k4O-U06qjU93XH-k01cjvEoqyn4AGTvRvw</recordid><startdate>201008</startdate><enddate>201008</enddate><creator>van Niftrik, Laura</creator><creator>van Helden, Mary</creator><creator>Kirchen, Silke</creator><creator>van Donselaar, Elly G</creator><creator>Harhangi, Harry R</creator><creator>Webb, Richard I</creator><creator>Fuerst, John A</creator><creator>Op den Camp, Huub J.M</creator><creator>Jetten, Mike S.M</creator><creator>Strous, Marc</creator><general>Oxford, UK : Blackwell Publishing Ltd</general><general>Blackwell Publishing Ltd</general><general>Blackwell</general><scope>FBQ</scope><scope>24P</scope><scope>WIN</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>201008</creationdate><title>Intracellular localization of membrane-bound ATPases in the compartmentalized anammox bacterium 'Candidatus Kuenenia stuttgartiensis'</title><author>van Niftrik, Laura ; van Helden, Mary ; Kirchen, Silke ; van Donselaar, Elly G ; Harhangi, Harry R ; Webb, Richard I ; Fuerst, John A ; Op den Camp, Huub J.M ; Jetten, Mike S.M ; Strous, Marc</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5542-398ec95fa0d233ca891d4ce09dc9b1204694ce99143dcfeee9b6c78a5fe8178a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Adenosine triphosphatase</topic><topic>Adenosine Triphosphatases - genetics</topic><topic>Adenosine Triphosphatases - metabolism</topic><topic>Ammonia</topic><topic>Anaerobiosis</topic><topic>Bacteria - enzymology</topic><topic>Bacteria - genetics</topic><topic>Bacteria - metabolism</topic><topic>Bacterial proteins</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>Biological and medical sciences</topic><topic>Cell Membrane - enzymology</topic><topic>Cell Membrane - genetics</topic><topic>Cell Membrane - metabolism</topic><topic>Fundamental and applied biological sciences. 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It is proposed that the anammox reaction is performed by proteins located in the anammoxosome and on its membrane giving rise to a proton-motive-force and subsequent ATP synthesis by membrane-bound ATPases. To test this hypothesis, we investigated the location of membrane-bound ATPases in the anammox bacterium 'Candidatus Kuenenia stuttgartiensis'. Four ATPase gene clusters were identified in the K. stuttgartiensis genome: one typical F-ATPase, two atypical F-ATPases and a prokaryotic V-ATPase. K. stuttgartiensis transcriptomic and proteomic analysis and immunoblotting using antisera directed at catalytic subunits of the ATPase gene clusters indicated that only the typical F-ATPase gene cluster most likely encoded a functional ATPase under these cultivation conditions. Immunogold localization showed that the typical F-ATPase was predominantly located on both the outermost and anammoxosome membrane and to a lesser extent on the middle membrane. This is consistent with the anammox physiology model, and confirms the status of the outermost cell membrane as cytoplasmic membrane. The occurrence of ATPase in the anammoxosome membrane suggests that anammox bacteria have evolved a prokaryotic organelle; a membrane-bounded compartment with a specific cellular function: energy metabolism.</abstract><cop>Oxford, UK</cop><pub>Oxford, UK : Blackwell Publishing Ltd</pub><pmid>20545867</pmid><doi>10.1111/j.1365-2958.2010.07242.x</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adenosine triphosphatase Adenosine Triphosphatases - genetics Adenosine Triphosphatases - metabolism Ammonia Anaerobiosis Bacteria - enzymology Bacteria - genetics Bacteria - metabolism Bacterial proteins Bacterial Proteins - genetics Bacterial Proteins - metabolism Biological and medical sciences Cell Membrane - enzymology Cell Membrane - genetics Cell Membrane - metabolism Fundamental and applied biological sciences. Psychology Genes Genomics Membranes Microbiology Molecular Sequence Data Physiology Protein Transport Quaternary Ammonium Compounds - metabolism |
title | Intracellular localization of membrane-bound ATPases in the compartmentalized anammox bacterium 'Candidatus Kuenenia stuttgartiensis' |
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