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A structural basis for Lowe syndrome caused by mutations in the Rab-binding domain of OCRL1
The oculocerebrorenal syndrome of Lowe (OCRL), also called Lowe syndrome, is characterized by defects of the nervous system, the eye and the kidney. Lowe syndrome is a monogenetic X‐linked disease caused by mutations of the inositol‐5‐phosphatase OCRL1. OCRL1 is a membrane‐bound protein recruited to...
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Published in: | The EMBO journal 2011-04, Vol.30 (8), p.1659-1670 |
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description | The oculocerebrorenal syndrome of Lowe (OCRL), also called Lowe syndrome, is characterized by defects of the nervous system, the eye and the kidney. Lowe syndrome is a monogenetic X‐linked disease caused by mutations of the inositol‐5‐phosphatase OCRL1. OCRL1 is a membrane‐bound protein recruited to membranes via interaction with a variety of Rab proteins. The structural and kinetic basis of OCRL1 for the recognition of several Rab proteins is unknown. In this study, we report the crystal structure of the Rab‐binding domain (RBD) of OCRL1 in complex with Rab8a and the kinetic binding analysis of OCRL1 with several Rab GTPases (Rab1b, Rab5a, Rab6a and Rab8a). In contrast to other effectors that bind their respective Rab predominantly via α‐helical structure elements, the Rab‐binding interface of OCRL1 consists mainly of the IgG‐like β‐strand structure of the ASPM‐SPD‐2‐Hydin domain as well as one α‐helix. Our results give a deeper structural understanding of disease‐causing mutations of OCRL1 affecting Rab binding.
Mutations in the Rab‐effector protein OCRL1 give rise to Lowe syndrome. The structural characterization of the OCRL1/Rab8a interaction reveals a novel Rab‐effector binding mode and elucidates the structural consequences of disease‐relevant ORCL1 mutations. |
doi_str_mv | 10.1038/emboj.2011.60 |
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Mutations in the Rab‐effector protein OCRL1 give rise to Lowe syndrome. The structural characterization of the OCRL1/Rab8a interaction reveals a novel Rab‐effector binding mode and elucidates the structural consequences of disease‐relevant ORCL1 mutations.</description><identifier>ISSN: 0261-4189</identifier><identifier>EISSN: 1460-2075</identifier><identifier>DOI: 10.1038/emboj.2011.60</identifier><identifier>PMID: 21378754</identifier><identifier>CODEN: EMJODG</identifier><language>eng</language><publisher>Chichester, UK: John Wiley & Sons, Ltd</publisher><subject>Binding sites ; Cell Membrane - metabolism ; Crystallization ; Crystallography, X-Ray ; Dent disease ; EMBO20 ; EMBO24 ; EMBO40 ; Fluorescent Antibody Technique ; Humans ; Immunoprecipitation ; Kidneys ; Lowe syndrome ; Membranes ; Mutation ; Mutation - genetics ; OCRL ; Oculocerebrorenal Syndrome - genetics ; Oculocerebrorenal Syndrome - metabolism ; Phosphoric Monoester Hydrolases - chemistry ; Phosphoric Monoester Hydrolases - genetics ; Phosphoric Monoester Hydrolases - metabolism ; Protein Conformation ; Protein Structure, Tertiary ; Proteins ; Rab ; rab GTP-Binding Proteins - genetics ; rab GTP-Binding Proteins - metabolism ; Rab8</subject><ispartof>The EMBO journal, 2011-04, Vol.30 (8), p.1659-1670</ispartof><rights>European Molecular Biology Organization 2011</rights><rights>Copyright © 2011 European Molecular Biology Organization</rights><rights>Copyright Nature Publishing Group Apr 20, 2011</rights><rights>Copyright © 2011, European Molecular Biology Organization 2011 European Molecular Biology Organization</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5900-6550fc9c433bd54717a92276a56176c81b6dde4098e127f91eb951a293006d563</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3102282/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3102282/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21378754$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hou, Xiaomin</creatorcontrib><creatorcontrib>Hagemann, Nina</creatorcontrib><creatorcontrib>Schoebel, Stefan</creatorcontrib><creatorcontrib>Blankenfeldt, Wulf</creatorcontrib><creatorcontrib>Goody, Roger S</creatorcontrib><creatorcontrib>Erdmann, Kai S</creatorcontrib><creatorcontrib>Itzen, Aymelt</creatorcontrib><title>A structural basis for Lowe syndrome caused by mutations in the Rab-binding domain of OCRL1</title><title>The EMBO journal</title><addtitle>EMBO J</addtitle><addtitle>EMBO J</addtitle><description>The oculocerebrorenal syndrome of Lowe (OCRL), also called Lowe syndrome, is characterized by defects of the nervous system, the eye and the kidney. Lowe syndrome is a monogenetic X‐linked disease caused by mutations of the inositol‐5‐phosphatase OCRL1. OCRL1 is a membrane‐bound protein recruited to membranes via interaction with a variety of Rab proteins. The structural and kinetic basis of OCRL1 for the recognition of several Rab proteins is unknown. In this study, we report the crystal structure of the Rab‐binding domain (RBD) of OCRL1 in complex with Rab8a and the kinetic binding analysis of OCRL1 with several Rab GTPases (Rab1b, Rab5a, Rab6a and Rab8a). In contrast to other effectors that bind their respective Rab predominantly via α‐helical structure elements, the Rab‐binding interface of OCRL1 consists mainly of the IgG‐like β‐strand structure of the ASPM‐SPD‐2‐Hydin domain as well as one α‐helix. Our results give a deeper structural understanding of disease‐causing mutations of OCRL1 affecting Rab binding.
Mutations in the Rab‐effector protein OCRL1 give rise to Lowe syndrome. The structural characterization of the OCRL1/Rab8a interaction reveals a novel Rab‐effector binding mode and elucidates the structural consequences of disease‐relevant ORCL1 mutations.</description><subject>Binding sites</subject><subject>Cell Membrane - metabolism</subject><subject>Crystallization</subject><subject>Crystallography, X-Ray</subject><subject>Dent disease</subject><subject>EMBO20</subject><subject>EMBO24</subject><subject>EMBO40</subject><subject>Fluorescent Antibody Technique</subject><subject>Humans</subject><subject>Immunoprecipitation</subject><subject>Kidneys</subject><subject>Lowe syndrome</subject><subject>Membranes</subject><subject>Mutation</subject><subject>Mutation - genetics</subject><subject>OCRL</subject><subject>Oculocerebrorenal Syndrome - genetics</subject><subject>Oculocerebrorenal Syndrome - metabolism</subject><subject>Phosphoric Monoester Hydrolases - chemistry</subject><subject>Phosphoric Monoester Hydrolases - genetics</subject><subject>Phosphoric Monoester Hydrolases - metabolism</subject><subject>Protein Conformation</subject><subject>Protein Structure, Tertiary</subject><subject>Proteins</subject><subject>Rab</subject><subject>rab GTP-Binding Proteins - genetics</subject><subject>rab GTP-Binding Proteins - metabolism</subject><subject>Rab8</subject><issn>0261-4189</issn><issn>1460-2075</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNptkc1v1DAQxS0EotvCkSsyXDhlGduxnVyQ2lVbQAtFBVQJDpaTeLdeErvYScv-93ibEj7EyZbn996M5yH0hMCcACtemq7ymzkFQuYC7qEZyQVkFCS_j2ZABclyUpR7aD_GDQDwQpKHaI8SJgvJ8xn6eohjH4a6H4JucaWjjXjlA176G4Pj1jXBdwbXeoimwdUWd0Ove-tdxNbh_tLgc11llXWNdWvc-E6nZ7_CZ4vzJXmEHqx0G83ju_MAfT45_rR4nS3PTt8sDpdZzUuATHAOq7qsc8aqhueSSF1SKoXmgkhRF6QSTWNyKAtDqFyVxFQlJ5qWDEA0XLAD9Gr0vRqqzjS1cX36jLoKttNhq7y26u-Ks5dq7a8VI0BpQZPBizuD4L8PJvaqs7E2baud8UNUhWBpiwJ25PN_yI0fgku_S1DatihAJujpn_NMg_zaegL4CNzY1mynOgG1i1TdRqp2kSoB6vjd0dvdXUDSzUddTBK3NuF39_9qk-DZKHA6BWymTrfUZJqNjI29-TEhOnxTQjLJ1cX7U_Xl5MPRRf6RqAX7Cf4-vaY</recordid><startdate>20110420</startdate><enddate>20110420</enddate><creator>Hou, Xiaomin</creator><creator>Hagemann, Nina</creator><creator>Schoebel, Stefan</creator><creator>Blankenfeldt, Wulf</creator><creator>Goody, Roger S</creator><creator>Erdmann, Kai S</creator><creator>Itzen, Aymelt</creator><general>John Wiley & Sons, Ltd</general><general>Nature Publishing Group UK</general><general>Blackwell Publishing Ltd</general><general>Nature Publishing Group</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7T5</scope><scope>7TK</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PCBAR</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20110420</creationdate><title>A structural basis for Lowe syndrome caused by mutations in the Rab-binding domain of OCRL1</title><author>Hou, Xiaomin ; Hagemann, Nina ; Schoebel, Stefan ; Blankenfeldt, Wulf ; Goody, Roger S ; Erdmann, Kai S ; Itzen, Aymelt</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5900-6550fc9c433bd54717a92276a56176c81b6dde4098e127f91eb951a293006d563</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Binding sites</topic><topic>Cell Membrane - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The EMBO journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hou, Xiaomin</au><au>Hagemann, Nina</au><au>Schoebel, Stefan</au><au>Blankenfeldt, Wulf</au><au>Goody, Roger S</au><au>Erdmann, Kai S</au><au>Itzen, Aymelt</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A structural basis for Lowe syndrome caused by mutations in the Rab-binding domain of OCRL1</atitle><jtitle>The EMBO journal</jtitle><stitle>EMBO J</stitle><addtitle>EMBO J</addtitle><date>2011-04-20</date><risdate>2011</risdate><volume>30</volume><issue>8</issue><spage>1659</spage><epage>1670</epage><pages>1659-1670</pages><issn>0261-4189</issn><eissn>1460-2075</eissn><coden>EMJODG</coden><abstract>The oculocerebrorenal syndrome of Lowe (OCRL), also called Lowe syndrome, is characterized by defects of the nervous system, the eye and the kidney. Lowe syndrome is a monogenetic X‐linked disease caused by mutations of the inositol‐5‐phosphatase OCRL1. OCRL1 is a membrane‐bound protein recruited to membranes via interaction with a variety of Rab proteins. The structural and kinetic basis of OCRL1 for the recognition of several Rab proteins is unknown. In this study, we report the crystal structure of the Rab‐binding domain (RBD) of OCRL1 in complex with Rab8a and the kinetic binding analysis of OCRL1 with several Rab GTPases (Rab1b, Rab5a, Rab6a and Rab8a). In contrast to other effectors that bind their respective Rab predominantly via α‐helical structure elements, the Rab‐binding interface of OCRL1 consists mainly of the IgG‐like β‐strand structure of the ASPM‐SPD‐2‐Hydin domain as well as one α‐helix. Our results give a deeper structural understanding of disease‐causing mutations of OCRL1 affecting Rab binding.
Mutations in the Rab‐effector protein OCRL1 give rise to Lowe syndrome. The structural characterization of the OCRL1/Rab8a interaction reveals a novel Rab‐effector binding mode and elucidates the structural consequences of disease‐relevant ORCL1 mutations.</abstract><cop>Chichester, UK</cop><pub>John Wiley & Sons, Ltd</pub><pmid>21378754</pmid><doi>10.1038/emboj.2011.60</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Binding sites Cell Membrane - metabolism Crystallization Crystallography, X-Ray Dent disease EMBO20 EMBO24 EMBO40 Fluorescent Antibody Technique Humans Immunoprecipitation Kidneys Lowe syndrome Membranes Mutation Mutation - genetics OCRL Oculocerebrorenal Syndrome - genetics Oculocerebrorenal Syndrome - metabolism Phosphoric Monoester Hydrolases - chemistry Phosphoric Monoester Hydrolases - genetics Phosphoric Monoester Hydrolases - metabolism Protein Conformation Protein Structure, Tertiary Proteins Rab rab GTP-Binding Proteins - genetics rab GTP-Binding Proteins - metabolism Rab8 |
title | A structural basis for Lowe syndrome caused by mutations in the Rab-binding domain of OCRL1 |
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