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Replication of origin containing adenovirus DNA fragments that do not carry the terminal protein
Nuclear extracts from adenovirus type 5 (Ad5) infected HeLa cells were used to study the template requirements for adenovirus DNA replication in vitro. When Xba I digested Ad5 DNA, containing the parental terminal protein (TP), was used as a template preferential synthesis of the terminal fragments...
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Published in: | Nucleic acids research 1983-04, Vol.11 (7), p.1975-1989 |
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container_end_page | 1989 |
container_issue | 7 |
container_start_page | 1975 |
container_title | Nucleic acids research |
container_volume | 11 |
creator | Bergen, B. G. M. van Ley, P.A. van der Driel, W. van Mansfeld, A. D. M. van Vliet, P. C. van der |
description | Nuclear extracts from adenovirus type 5 (Ad5) infected HeLa cells were used to study the template requirements for adenovirus DNA replication in vitro. When Xba I digested Ad5 DNA, containing the parental terminal protein (TP), was used as a template preferential synthesis of the terminal fragments was observed. The newly synthesized DNA was covalently bound to the 82 kD preterminal protein (pTP). Plasmid DNAs containing the Ad2 origin sequence or the Ad12 origin sequence with small deletions were analyzed for their capacity to support pTP-primed DNA replication. Circular plasmid DNAs were inactive. When plasmids were linearized to expose the adenovirus origin, both Ad2 and Ad12 TP-free fragments could support initiation and elongation similarly as Ad5 DNA-TP, although with lower efficiency. These observations indicate that the parental terminal protein is dispensable for initiation in vitro. The presence of 29 nucleotides ahead of the molecular end or a deletion of 14 base pairs extending into the conserved sequence (9–22) destroyed the template activity. DNA with a large deletion within the first 8 base pairs could still support replication while a small deletion could not. The results suggest that only G residues at a distance of 4–8 nucleotides from the start of the conserved sequence can be used as template during initiation of DNA replication. |
doi_str_mv | 10.1093/nar/11.7.1975 |
format | article |
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G. M. van ; Ley, P.A. van der ; Driel, W. van ; Mansfeld, A. D. M. van ; Vliet, P. C. van der</creator><creatorcontrib>Bergen, B. G. M. van ; Ley, P.A. van der ; Driel, W. van ; Mansfeld, A. D. M. van ; Vliet, P. C. van der</creatorcontrib><description>Nuclear extracts from adenovirus type 5 (Ad5) infected HeLa cells were used to study the template requirements for adenovirus DNA replication in vitro. When Xba I digested Ad5 DNA, containing the parental terminal protein (TP), was used as a template preferential synthesis of the terminal fragments was observed. The newly synthesized DNA was covalently bound to the 82 kD preterminal protein (pTP). Plasmid DNAs containing the Ad2 origin sequence or the Ad12 origin sequence with small deletions were analyzed for their capacity to support pTP-primed DNA replication. Circular plasmid DNAs were inactive. When plasmids were linearized to expose the adenovirus origin, both Ad2 and Ad12 TP-free fragments could support initiation and elongation similarly as Ad5 DNA-TP, although with lower efficiency. These observations indicate that the parental terminal protein is dispensable for initiation in vitro. The presence of 29 nucleotides ahead of the molecular end or a deletion of 14 base pairs extending into the conserved sequence (9–22) destroyed the template activity. DNA with a large deletion within the first 8 base pairs could still support replication while a small deletion could not. The results suggest that only G residues at a distance of 4–8 nucleotides from the start of the conserved sequence can be used as template during initiation of DNA replication.</description><identifier>ISSN: 0305-1048</identifier><identifier>EISSN: 1362-4962</identifier><identifier>DOI: 10.1093/nar/11.7.1975</identifier><identifier>PMID: 6300787</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Adenovirus ; Adenoviruses, Human - genetics ; Base Composition ; Base Sequence ; Cloning, Molecular ; DNA Replication ; DNA Restriction Enzymes ; DNA, Viral - genetics ; HeLa Cells - metabolism ; Humans ; Plasmids ; Templates, Genetic ; Viral Proteins - genetics ; Virus Replication</subject><ispartof>Nucleic acids research, 1983-04, Vol.11 (7), p.1975-1989</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c481t-992e84f974cf58eea5332705053c8b239011255e54cfc6b53b49a56d5e6795e83</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC325855/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC325855/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/6300787$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bergen, B. G. M. van</creatorcontrib><creatorcontrib>Ley, P.A. van der</creatorcontrib><creatorcontrib>Driel, W. van</creatorcontrib><creatorcontrib>Mansfeld, A. D. M. van</creatorcontrib><creatorcontrib>Vliet, P. C. van der</creatorcontrib><title>Replication of origin containing adenovirus DNA fragments that do not carry the terminal protein</title><title>Nucleic acids research</title><addtitle>Nucleic Acids Res</addtitle><description>Nuclear extracts from adenovirus type 5 (Ad5) infected HeLa cells were used to study the template requirements for adenovirus DNA replication in vitro. When Xba I digested Ad5 DNA, containing the parental terminal protein (TP), was used as a template preferential synthesis of the terminal fragments was observed. The newly synthesized DNA was covalently bound to the 82 kD preterminal protein (pTP). Plasmid DNAs containing the Ad2 origin sequence or the Ad12 origin sequence with small deletions were analyzed for their capacity to support pTP-primed DNA replication. Circular plasmid DNAs were inactive. When plasmids were linearized to expose the adenovirus origin, both Ad2 and Ad12 TP-free fragments could support initiation and elongation similarly as Ad5 DNA-TP, although with lower efficiency. These observations indicate that the parental terminal protein is dispensable for initiation in vitro. The presence of 29 nucleotides ahead of the molecular end or a deletion of 14 base pairs extending into the conserved sequence (9–22) destroyed the template activity. DNA with a large deletion within the first 8 base pairs could still support replication while a small deletion could not. The results suggest that only G residues at a distance of 4–8 nucleotides from the start of the conserved sequence can be used as template during initiation of DNA replication.</description><subject>Adenovirus</subject><subject>Adenoviruses, Human - genetics</subject><subject>Base Composition</subject><subject>Base Sequence</subject><subject>Cloning, Molecular</subject><subject>DNA Replication</subject><subject>DNA Restriction Enzymes</subject><subject>DNA, Viral - genetics</subject><subject>HeLa Cells - metabolism</subject><subject>Humans</subject><subject>Plasmids</subject><subject>Templates, Genetic</subject><subject>Viral Proteins - genetics</subject><subject>Virus Replication</subject><issn>0305-1048</issn><issn>1362-4962</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1983</creationdate><recordtype>article</recordtype><recordid>eNqFkc1vEzEQxVcIVELhyBHJJ26b2muPPw4cqvARUFUEAgn1YhxnNjXs2sF2Kvrfs1GjAKeeRpr3e08zek3znNE5o4afRZfPGJurOTMKHjQzxmXXCiO7h82Mcgoto0I_bp6U8oNSJhiIk-ZEckqVVrPm-2fcDsG7GlIkqScph02IxKdYXYghbohbY0w3Ie8KeX15TvrsNiPGWki9dpWsE4mpEu9yvp02SCrmMUQ3kG1OFUN82jzq3VDw2WGeNl_fvvmyWLYXH9-9X5xftF5oVltjOtSiN0r4HjSiA847RYEC93rVcUMZ6wAQJt3LFfCVMA7kGlAqA6j5afPqLne7W4249tOJ2Q12m8Po8q1NLtj_lRiu7SbdWN6BBpj8Lw_-nH7tsFQ7huJxGFzEtCtWU9FpbsS9IDNcUq70_SAHqajcg-0d6HMqJWN_vJpRu-_YTh1bxqyy-44n_sW_rx7pQ6l_80Kp-Psou_zTSsUV2OW3K3u1kJ-WVFzaD_wPCfmy0w</recordid><startdate>19830411</startdate><enddate>19830411</enddate><creator>Bergen, B. 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M. van</creatorcontrib><creatorcontrib>Vliet, P. C. van der</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nucleic acids research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bergen, B. G. M. van</au><au>Ley, P.A. van der</au><au>Driel, W. van</au><au>Mansfeld, A. D. M. van</au><au>Vliet, P. C. van der</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Replication of origin containing adenovirus DNA fragments that do not carry the terminal protein</atitle><jtitle>Nucleic acids research</jtitle><addtitle>Nucleic Acids Res</addtitle><date>1983-04-11</date><risdate>1983</risdate><volume>11</volume><issue>7</issue><spage>1975</spage><epage>1989</epage><pages>1975-1989</pages><issn>0305-1048</issn><eissn>1362-4962</eissn><abstract>Nuclear extracts from adenovirus type 5 (Ad5) infected HeLa cells were used to study the template requirements for adenovirus DNA replication in vitro. When Xba I digested Ad5 DNA, containing the parental terminal protein (TP), was used as a template preferential synthesis of the terminal fragments was observed. The newly synthesized DNA was covalently bound to the 82 kD preterminal protein (pTP). Plasmid DNAs containing the Ad2 origin sequence or the Ad12 origin sequence with small deletions were analyzed for their capacity to support pTP-primed DNA replication. Circular plasmid DNAs were inactive. When plasmids were linearized to expose the adenovirus origin, both Ad2 and Ad12 TP-free fragments could support initiation and elongation similarly as Ad5 DNA-TP, although with lower efficiency. These observations indicate that the parental terminal protein is dispensable for initiation in vitro. The presence of 29 nucleotides ahead of the molecular end or a deletion of 14 base pairs extending into the conserved sequence (9–22) destroyed the template activity. DNA with a large deletion within the first 8 base pairs could still support replication while a small deletion could not. The results suggest that only G residues at a distance of 4–8 nucleotides from the start of the conserved sequence can be used as template during initiation of DNA replication.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>6300787</pmid><doi>10.1093/nar/11.7.1975</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adenovirus Adenoviruses, Human - genetics Base Composition Base Sequence Cloning, Molecular DNA Replication DNA Restriction Enzymes DNA, Viral - genetics HeLa Cells - metabolism Humans Plasmids Templates, Genetic Viral Proteins - genetics Virus Replication |
title | Replication of origin containing adenovirus DNA fragments that do not carry the terminal protein |
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