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Genome Sequence of the Biocontrol Strain Pseudomonas fluorescens F113
Pseudomonas fluorescens F113 is a plant growth-promoting rhizobacterium (PGPR) that has biocontrol activity against fungal plant pathogens and is a model for rhizosphere colonization. Here, we present its complete genome sequence, which shows that besides a core genome very similar to those of other...
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| Published in: | Journal of Bacteriology 2012-03, Vol.194 (5), p.1273-1274 |
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| Main Authors: | , , , , , , , , , , , , , , , , , |
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| cites | cdi_FETCH-LOGICAL-c587t-aa87bb6983dcfd34e1e2668cc768ee2fed3d2a0bb0ccac9387a60d3465abe4c23 |
| container_end_page | 1274 |
| container_issue | 5 |
| container_start_page | 1273 |
| container_title | Journal of Bacteriology |
| container_volume | 194 |
| creator | Redondo-Nieto, Miguel Barret, Matthieu Morrisey, John P Germaine, Kieran Martínez-Granero, Francisco Barahona, Emma Navazo, Ana Sánchez-Contreras, María Moynihan, Jennifer A Giddens, Stephen R Coppoolse, Eric R Muriel, Candela Stiekema, Willem J Rainey, Paul B Dowling, David O'Gara, Fergal Martín, Marta Rivilla, Rafael |
| description | Pseudomonas fluorescens F113 is a plant growth-promoting rhizobacterium (PGPR) that has biocontrol activity against fungal plant pathogens and is a model for rhizosphere colonization. Here, we present its complete genome sequence, which shows that besides a core genome very similar to those of other strains sequenced within this species, F113 possesses a wide array of genes encoding specialized functions for thriving in the rhizosphere and interacting with eukaryotic organisms. |
| doi_str_mv | 10.1128/JB.06601-11 |
| format | article |
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Here, we present its complete genome sequence, which shows that besides a core genome very similar to those of other strains sequenced within this species, F113 possesses a wide array of genes encoding specialized functions for thriving in the rhizosphere and interacting with eukaryotic organisms.</description><identifier>ISSN: 0021-9193</identifier><identifier>EISSN: 1098-5530</identifier><identifier>EISSN: 1067-8832</identifier><identifier>DOI: 10.1128/JB.06601-11</identifier><identifier>PMID: 22328765</identifier><identifier>CODEN: JOBAAY</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Bacteriology ; Biological and medical sciences ; biological control ; DNA, Bacterial - chemistry ; DNA, Bacterial - genetics ; Eukaryotes ; Fundamental and applied biological sciences. Psychology ; Genes ; Genome Announcements ; Genome, Bacterial ; Genomes ; Gram-negative bacteria ; Life Sciences ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; nucleotide sequences ; plant growth-promoting rhizobacteria ; plant pathogenic fungi ; Plants - microbiology ; Pseudomonas fluorescens ; Pseudomonas fluorescens - genetics ; Pseudomonas fluorescens - isolation & purification ; Rhizosphere ; Sequence Analysis, DNA</subject><ispartof>Journal of Bacteriology, 2012-03, Vol.194 (5), p.1273-1274</ispartof><rights>2015 INIST-CNRS</rights><rights>Copyright American Society for Microbiology Mar 2012</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>Copyright © 2012, American Society for Microbiology. All Rights Reserved. 2012 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c587t-aa87bb6983dcfd34e1e2668cc768ee2fed3d2a0bb0ccac9387a60d3465abe4c23</citedby><cites>FETCH-LOGICAL-c587t-aa87bb6983dcfd34e1e2668cc768ee2fed3d2a0bb0ccac9387a60d3465abe4c23</cites><orcidid>0000-0002-7633-8476</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3294817/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3294817/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,3188,3189,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=25543665$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22328765$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.inrae.fr/hal-02652031$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Redondo-Nieto, Miguel</creatorcontrib><creatorcontrib>Barret, Matthieu</creatorcontrib><creatorcontrib>Morrisey, John P</creatorcontrib><creatorcontrib>Germaine, Kieran</creatorcontrib><creatorcontrib>Martínez-Granero, Francisco</creatorcontrib><creatorcontrib>Barahona, Emma</creatorcontrib><creatorcontrib>Navazo, Ana</creatorcontrib><creatorcontrib>Sánchez-Contreras, María</creatorcontrib><creatorcontrib>Moynihan, Jennifer A</creatorcontrib><creatorcontrib>Giddens, Stephen R</creatorcontrib><creatorcontrib>Coppoolse, Eric R</creatorcontrib><creatorcontrib>Muriel, Candela</creatorcontrib><creatorcontrib>Stiekema, Willem J</creatorcontrib><creatorcontrib>Rainey, Paul B</creatorcontrib><creatorcontrib>Dowling, David</creatorcontrib><creatorcontrib>O'Gara, Fergal</creatorcontrib><creatorcontrib>Martín, Marta</creatorcontrib><creatorcontrib>Rivilla, Rafael</creatorcontrib><title>Genome Sequence of the Biocontrol Strain Pseudomonas fluorescens F113</title><title>Journal of Bacteriology</title><addtitle>J Bacteriol</addtitle><description>Pseudomonas fluorescens F113 is a plant growth-promoting rhizobacterium (PGPR) that has biocontrol activity against fungal plant pathogens and is a model for rhizosphere colonization. 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| identifier | ISSN: 0021-9193 |
| ispartof | Journal of Bacteriology, 2012-03, Vol.194 (5), p.1273-1274 |
| issn | 0021-9193 1098-5530 1067-8832 |
| language | eng |
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| source | PubMed Central Free; American Society for Microbiology Journals |
| subjects | Bacteriology Biological and medical sciences biological control DNA, Bacterial - chemistry DNA, Bacterial - genetics Eukaryotes Fundamental and applied biological sciences. Psychology Genes Genome Announcements Genome, Bacterial Genomes Gram-negative bacteria Life Sciences Microbiology Miscellaneous Molecular Sequence Data nucleotide sequences plant growth-promoting rhizobacteria plant pathogenic fungi Plants - microbiology Pseudomonas fluorescens Pseudomonas fluorescens - genetics Pseudomonas fluorescens - isolation & purification Rhizosphere Sequence Analysis, DNA |
| title | Genome Sequence of the Biocontrol Strain Pseudomonas fluorescens F113 |
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